MELO3C020216.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C020216.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionUnknown protein
Locationchr06 : 16462424 .. 16462610 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTCGCACATCAGCAGAATGTTGGCAGATTCGTCTCAAGACTTCGAAACAAGCTCAACTAACAACGCCACCCAAGTTTCCACCGGCGAATGCGACCGGCCCCCCCGCTACGACAGTTGCCTCGGCGATAAAAGAAATACTCCGCCACCACAAAATTGTAGCACCTACAACCGTGAACATCCCT

mRNA sequence

ATGGAGTCGCACATCAGCAGAATGTTGGCAGATTCGTCTCAAGACTTCGAAACAAGCTCAACTAACAACGCCACCCAAGTTTCCACCGGCGAATGCGACCGGCCCCCCCGCTACGACAGTTGCCTCGGCGATAAAAGAAATACTCCGCCACCACAAAATTGTAGCACCTACAACCGTGAACATCCCT

Coding sequence (CDS)

ATGGAGTCGCACATCAGCAGAATGTTGGCAGATTCGTCTCAAGACTTCGAAACAAGCTCAACTAACAACGCCACCCAAGTTTCCACCGGCGAATGCGACCGGCCCCCCCGCTACGACAGTTGCCTCGGCGATAAAAGAAATACTCCGCCACCACAAAATTGTAGCACCTACAACCGTGAACATCCC

Protein sequence

MESHISRMLADSSQDFETSSTNNATQVSTGECDRPPRYDSCLGDKRNTPPPQNCSTYNREHP
Homology
[Close]
BLAST of MELO3C020216.2 vs. NCBI nr
Match: XP_011651393.1 (PREDICTED: uncharacterized protein LOC105434882 [Cucumis sativus] >KGN57780.1 hypothetical protein Csa_3G298570 [Cucumis sativus])

HSP 1 Score: 117.9 bits (294), Expect = 1.3e-23
Identity = 58/62 (93.55%), Postives = 59/62 (95.16%), Query Frame = 0 

Query: 1   MESHISRMLADSSQDFETSSTNNATQVSTGECDRPPRYDSCLGDKRNTPPPQNCSTYNRE 60
           MESHISRMLAD SQDFETSSTNNATQVS GECDRPPRYDSCLG KRNTPPPQNCST+NRE
Sbjct: 59  MESHISRMLAD-SQDFETSSTNNATQVSAGECDRPPRYDSCLGVKRNTPPPQNCSTFNRE 118

Query: 61  HP 63
           HP
Sbjct: 119 HP 119

[Close]
BLAST of MELO3C020216.2 vs. NCBI nr
Match: XP_022998105.1 (uncharacterized protein LOC111492854 [Cucurbita maxima])

HSP 1 Score: 89.0 bits (219), Expect = 6.3e-15
Identity = 42/62 (67.74%), Postives = 50/62 (80.65%), Query Frame = 0 

Query: 1   MESHISRMLADSSQDFETSSTNNATQVSTGECDRPPRYDSCLGDKRNTPPPQNCSTYNRE 60
           MESHISR+LA  SQDF+TS TN+A + S G C+RPPRYDSCLG K N PPP+NC T+NR 
Sbjct: 56  MESHISRILA-GSQDFQTSKTNDANKASGGGCERPPRYDSCLGQKSNNPPPENCGTFNRN 115

Query: 61  HP 63
           +P
Sbjct: 116 NP 116

[Close]
BLAST of MELO3C020216.2 vs. NCBI nr
Match: XP_023523220.1 (uncharacterized protein LOC111787479 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 86.3 bits (212), Expect = 4.1e-14
Identity = 41/62 (66.13%), Postives = 50/62 (80.65%), Query Frame = 0 

Query: 1   MESHISRMLADSSQDFETSSTNNATQVSTGECDRPPRYDSCLGDKRNTPPPQNCSTYNRE 60
           MESHISR+LA  SQ+F+TS+TN+A + S G C RPPRYDSCLG K N PPP+NC T+NR 
Sbjct: 56  MESHISRILA-GSQNFQTSNTNDANKASGGGCGRPPRYDSCLGQKSNNPPPENCGTFNRN 115

Query: 61  HP 63
           +P
Sbjct: 116 NP 116

[Close]
BLAST of MELO3C020216.2 vs. NCBI nr
Match: XP_022948338.1 (uncharacterized protein LOC111452044 [Cucurbita moschata])

HSP 1 Score: 85.9 bits (211), Expect = 5.3e-14
Identity = 41/62 (66.13%), Postives = 49/62 (79.03%), Query Frame = 0 

Query: 1   MESHISRMLADSSQDFETSSTNNATQVSTGECDRPPRYDSCLGDKRNTPPPQNCSTYNRE 60
           MESHISR+LA  SQ+F+TS TN+A + S G C RPPRYDSCLG K N PPP+NC T+NR 
Sbjct: 56  MESHISRILA-GSQNFQTSKTNDANKASGGGCGRPPRYDSCLGQKSNNPPPENCGTFNRN 115

Query: 61  HP 63
           +P
Sbjct: 116 NP 116

[Close]
BLAST of MELO3C020216.2 vs. NCBI nr
Match: XP_022143304.1 (uncharacterized protein LOC111013208 [Momordica charantia])

HSP 1 Score: 82.4 bits (202), Expect = 5.9e-13
Identity = 39/62 (62.90%), Postives = 49/62 (79.03%), Query Frame = 0 

Query: 1   MESHISRMLADSSQDFETSSTNNATQVSTGECDRPPRYDSCLGDKRNTPPPQNCSTYNRE 60
           MESH+SR+LA +SQ+F+TSSTNNA + +  +C R PRYDSCLG K   PPP+NC+TYNR 
Sbjct: 54  MESHLSRILASNSQNFQTSSTNNANRAAV-DCSRQPRYDSCLGQKNGVPPPENCATYNRV 113

Query: 61  HP 63
            P
Sbjct: 114 CP 114

[Close]
BLAST of MELO3C020216.2 vs. TrEMBL
Match: tr|A0A0A0L711|A0A0A0L711_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298570 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 8.3e-24
Identity = 58/62 (93.55%), Postives = 59/62 (95.16%), Query Frame = 0 

Query: 1   MESHISRMLADSSQDFETSSTNNATQVSTGECDRPPRYDSCLGDKRNTPPPQNCSTYNRE 60
           MESHISRMLAD SQDFETSSTNNATQVS GECDRPPRYDSCLG KRNTPPPQNCST+NRE
Sbjct: 59  MESHISRMLAD-SQDFETSSTNNATQVSAGECDRPPRYDSCLGVKRNTPPPQNCSTFNRE 118

Query: 61  HP 63
           HP
Sbjct: 119 HP 119

[Close]
BLAST of MELO3C020216.2 vs. TrEMBL
Match: tr|A0A0A0LCJ4|A0A0A0LCJ4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298580 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 4.3e-12
Identity = 40/62 (64.52%), Postives = 48/62 (77.42%), Query Frame = 0 

Query: 1   MESHISRMLADSSQDFETSSTNNATQVSTGECDRPPRYDSCLGDKRNTPPPQNCSTYNRE 60
           MESHISR+LA SS++++T+ST NA + S G CDRPPRYDSCLG KRN     NCS YNR 
Sbjct: 58  MESHISRILA-SSKNYQTASTTNANKASGGGCDRPPRYDSCLGKKRNXXXXPNCSPYNRA 117

Query: 61  HP 63
           +P
Sbjct: 118 NP 118

[Close]
BLAST of MELO3C020216.2 vs. TrEMBL
Match: tr|A0A0A0L9X5|A0A0A0L9X5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298070 PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 5.3e-10
Identity = 35/62 (56.45%), Postives = 43/62 (69.35%), Query Frame = 0 

Query: 1   MESHISRMLADSSQDFETSSTNNATQVSTGECDRPPRYDSCLGDKRNTPPPQNCSTYNRE 60
           MESH+SR+LA+    FET  T NA   S   C+RPPRYDSCLG+ R+ PP +NC  YNR 
Sbjct: 54  MESHVSRILAELR--FETMRTPNANSASVVNCERPPRYDSCLGEARDNPPSENCDPYNRA 113

Query: 61  HP 63
           +P
Sbjct: 114 NP 113

[Close]
BLAST of MELO3C020216.2 vs. TrEMBL
Match: tr|A0A0A0KW62|A0A0A0KW62_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G130630 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 5.4e-07
Identity = 31/62 (50.00%), Postives = 39/62 (62.90%), Query Frame = 0 

Query: 1   MESHISRMLADSSQDFETSSTNNATQVSTGECDRPPRYDSCLGDKRNTPPPQNCSTYNRE 60
           M +  S ML D    F+T   N+A + S  +C RPPRYDSCLG KR+ P P+ CST NR 
Sbjct: 65  MLTESSGMLVDQFLTFQTPKANDANKESVPDCSRPPRYDSCLGSKRSIPNPEPCSTLNRV 124

Query: 61  HP 63
           +P
Sbjct: 125 NP 126

[Close]
BLAST of MELO3C020216.2 vs. TrEMBL
Match: tr|A0A0A0KVZ2|A0A0A0KVZ2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G131140 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 3.5e-06
Identity = 30/62 (48.39%), Postives = 39/62 (62.90%), Query Frame = 0 

Query: 1   MESHISRMLADSSQDFETSSTNNATQVSTGECDRPPRYDSCLGDKRNTPPPQNCSTYNRE 60
           ME+  SRML D  Q+ +T  T +  + S  EC RPPRYDSC G++R  P P+NC   NR 
Sbjct: 55  METETSRMLLD-FQNLQTPGTIDPNRQSVAECGRPPRYDSCTGEERQIPNPENCDVRNRA 114

Query: 61  HP 63
           +P
Sbjct: 115 NP 115

The following BLAST results are available for this feature:
BLAST of MELO3C020216.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011651393.11.3e-2393.55PREDICTED: uncharacterized protein LOC105434882 [Cucumis sativus] >KGN57780.1 hy... [more]
XP_022998105.16.3e-1567.74uncharacterized protein LOC111492854 [Cucurbita maxima][more]
XP_023523220.14.1e-1466.13uncharacterized protein LOC111787479 [Cucurbita pepo subsp. pepo][more]
XP_022948338.15.3e-1466.13uncharacterized protein LOC111452044 [Cucurbita moschata][more]
XP_022143304.15.9e-1362.90uncharacterized protein LOC111013208 [Momordica charantia][more]
BLAST of MELO3C020216.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C020216.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C020216.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L711|A0A0A0L711_CUCSA8.3e-2493.55Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298570 PE=4 SV=1[more]
tr|A0A0A0LCJ4|A0A0A0LCJ4_CUCSA4.3e-1264.52Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298580 PE=4 SV=1[more]
tr|A0A0A0L9X5|A0A0A0L9X5_CUCSA5.3e-1056.45Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298070 PE=4 SV=1[more]
tr|A0A0A0KW62|A0A0A0KW62_CUCSA5.4e-0750.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G130630 PE=4 SV=1[more]
tr|A0A0A0KVZ2|A0A0A0KVZ2_CUCSA3.5e-0648.39Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G131140 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C020216.2.1MELO3C020216.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..30
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..62
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 46..62

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C020216.2Cucumber (Gy14) v2cgybmedB216
MELO3C020216.2Cucurbita maxima (Rimu)cmamedB274
MELO3C020216.2Cucurbita maxima (Rimu)cmamedB496
MELO3C020216.2Cucurbita moschata (Rifu)cmomedB259
MELO3C020216.2Cucurbita moschata (Rifu)cmomedB261
MELO3C020216.2Cucurbita moschata (Rifu)cmomedB483
MELO3C020216.2Cucurbita pepo (Zucchini)cpemedB630
MELO3C020216.2Cucurbita pepo (Zucchini)cpemedB692
MELO3C020216.2Cucurbita pepo (Zucchini)cpemedB694
MELO3C020216.2Wild cucumber (PI 183967)cpimedB240
MELO3C020216.2Cucumber (Chinese Long) v2cumedB239
MELO3C020216.2Bottle gourd (USVL1VR-Ls)lsimedB384
MELO3C020216.2Bottle gourd (USVL1VR-Ls)lsimedB406
MELO3C020216.2Watermelon (Charleston Gray)medwcgB417
MELO3C020216.2Watermelon (Charleston Gray)medwcgB431
MELO3C020216.2Watermelon (97103) v1medwmB448
MELO3C020216.2Watermelon (97103) v1medwmB462
MELO3C020216.2Silver-seed gourdcarmedB0489
MELO3C020216.2Cucumber (Chinese Long) v3cucmedB247
MELO3C020216.2Watermelon (97103) v2medwmbB424
MELO3C020216.2Watermelon (97103) v2medwmbB437
MELO3C020216.2Wax gourdmedwgoB540
MELO3C020216.2Wax gourdmedwgoB546