MELO3C020203 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C020203
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionHistidine--tRNA ligase, cytoplasmic
Locationchr6 : 15763147 .. 15763335 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTGGGAAACAAGATCTCTCTGCCAAGTCAAGCCAATCTGGTGAAGAGGCTGGGAATATCCAATCCAACGGTCCTATGTCGGAGCAAAGAAAGGAAGAAAAGGTATTAAAGACAGTGGTGATCAATGGAGTTGTAGTTCAGTTACCTAAGGACGAGTTGGGTGATCTATTGGCAATAGTATCTTAG

mRNA sequence

ATGTTTGGGAAACAAGATCTCTCTGCCAAGTCAAGCCAATCTGGTGAAGAGGCTGGGAATATCCAATCCAACGGTCCTATGTCGGAGCAAAGAAAGGAAGAAAAGGTATTAAAGACAGTGGTGATCAATGGAGTTGTAGTTCAGTTACCTAAGGACGAGTTGGGTGATCTATTGGCAATAGTATCTTAG

Coding sequence (CDS)

ATGTTTGGGAAACAAGATCTCTCTGCCAAGTCAAGCCAATCTGGTGAAGAGGCTGGGAATATCCAATCCAACGGTCCTATGTCGGAGCAAAGAAAGGAAGAAAAGGTATTAAAGACAGTGGTGATCAATGGAGTTGTAGTTCAGTTACCTAAGGACGAGTTGGGTGATCTATTGGCAATAGTATCTTAG

Protein sequence

MFGKQDLSAKSSQSGEEAGNIQSNGPMSEQRKEEKVLKTVVINGVVVQLPKDELGDLLAIVS*
Homology
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BLAST of MELO3C020203 vs. NCBI nr
Match: gi|659090014|ref|XP_008445787.1| (PREDICTED: axoneme-associated protein mst101(3)-like [Cucumis melo])

HSP 1 Score: 63.5 bits (153), Expect = 1.5e-07
Identity = 36/67 (53.73%), Postives = 46/67 (68.66%), Query Frame = 1 

Query: 1  MFGKQDLS------AKSSQSGEEAGNIQSNGPMSEQRKEEKVLKTVVINGVVVQLPKDEL 60
          MFGKQ L        K+S S E A    S+G +SEQRKE++ LK V+INGV +QL +D+L
Sbjct: 1  MFGKQALKKYQGTVGKASLSNEGAEKTPSDGLVSEQRKEKRPLKMVIINGVEIQLTEDKL 60

Query: 61 GDLLAIV 62
          GDLLAI+
Sbjct: 61 GDLLAII 67

The following BLAST results are available for this feature:
BLAST of MELO3C020203 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659090014|ref|XP_008445787.1|1.5e-0753.73PREDICTED: axoneme-associated protein mst101(3)-like [Cucumis melo][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C020203T1MELO3C020203T1mRNA