MELO3C020201 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C020201
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionCysteine-rich RLK (RECEPTOR-like protein kinase) 8
Locationchr6 : 15825654 .. 15826216 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAACAAACTTCTTGCAGCAACCGGGTTTTCCTCATCATGCATTGTTTAATTATGAACATCAAGGTTTGGTTGGTTTATCTTCGGTAATGGTTCAGCAACAGTTGGCGAATCTTCAGACAAGTTTTCAGCAACAGATCGCTGCTCTTGGTGCAGCTCTAGGAGCTTCCACAAATTCTGCCTCTCCTTTAGTCTTACTGATGTATTTAGAGAACTCGGTAACCTCTTTCCCTACCTTAATTGCTACAAGTTATTTATTTGGCTTCTTAGGAAATTCCATAAGAGAAATTGGAGGGGAGAAATTGAATGGTCAGAATTATTTCTCGTGTTTAAATCTATTAAGATGACGCTTAAGGGGCATCACAAATTTGGATACCTAATAGGAGAGGTACTGAGACCTAGACCGGGAGACCCTCAAAAGCGAATATGGAAAGGAGAGTACTCTCTTCTTCGGTCTGAGTTGATTAACAGTATGAAACCTCAAATTGGGAAACCTTTGTTGTATGCTGCTACTTCTCGAGACATAAGGGATACAATTCAAAAGTTATCCTCAAAGAGGTAG

mRNA sequence

ATGGCAACAAACTTCTTGCAGCAACCGGGTTTTCCTCATCATGCATTGTTTAATTATGAACATCAAGGTTTGGTTGGTTTATCTTCGGTAATGGTTCAGCAACAGTTGGCGAATCTTCAGACAAGTTTTCAGCAACAGATCGCTGCTCTTGGTGCAGCTCTAGGAGCTTCCACAAATTCTGCCTCTCCTTTAGTCTTACTGATGTATTTAGAGAACTCGATGACGCTTAAGGGGCATCACAAATTTGGATACCTAATAGGAGAGGTACTGAGACCTAGACCGGGAGACCCTCAAAAGCGAATATGGAAAGGAGAGTACTCTCTTCTTCGGTCTGAGTTGATTAACAGTATGAAACCTCAAATTGGGAAACCTTTGTTGTATGCTGCTACTTCTCGAGACATAAGGGATACAATTCAAAAGTTATCCTCAAAGAGGTAG

Coding sequence (CDS)

ATGGCAACAAACTTCTTGCAGCAACCGGGTTTTCCTCATCATGCATTGTTTAATTATGAACATCAAGGTTTGGTTGGTTTATCTTCGGTAATGGTTCAGCAACAGTTGGCGAATCTTCAGACAAGTTTTCAGCAACAGATCGCTGCTCTTGGTGCAGCTCTAGGAGCTTCCACAAATTCTGCCTCTCCTTTAGTCTTACTGATGTATTTAGAGAACTCGATGACGCTTAAGGGGCATCACAAATTTGGATACCTAATAGGAGAGGTACTGAGACCTAGACCGGGAGACCCTCAAAAGCGAATATGGAAAGGAGAGTACTCTCTTCTTCGGTCTGAGTTGATTAACAGTATGAAACCTCAAATTGGGAAACCTTTGTTGTATGCTGCTACTTCTCGAGACATAAGGGATACAATTCAAAAGTTATCCTCAAAGAGGTAG

Protein sequence

MATNFLQQPGFPHHALFNYEHQGLVGLSSVMVQQQLANLQTSFQQQIAALGAALGASTNSASPLVLLMYLENSMTLKGHHKFGYLIGEVLRPRPGDPQKRIWKGEYSLLRSELINSMKPQIGKPLLYAATSRDIRDTIQKLSSKR*
Homology
[Close]
BLAST of MELO3C020201 vs. TrEMBL
Match: A5AZK9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003938 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 6.9e-07
Identity = 26/65 (40.00%), Postives = 44/65 (67.69%), Query Frame = 1 

Query: 81  KFGYLIGEVLRPRPGDPQKRIWKGEYSLLRSELINSMKPQIGKPLLYAATSRDIRDTIQK 140
           K GY++G +  P+  +P   +W  E S++ S L+NS++P+IGKP L+ +T++DI D + K
Sbjct: 176 KMGYILGMIKAPKTTNPLFELWDSENSMIMSWLLNSIQPEIGKPFLFLSTAKDIWDAVVK 235

Query: 141 LSSKR 146
             SK+
Sbjct: 236 AYSKK 240

[Close]
BLAST of MELO3C020201 vs. TrEMBL
Match: A5ASK2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_005355 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 2.0e-06
Identity = 30/75 (40.00%), Postives = 47/75 (62.67%), Query Frame = 1 

Query: 69  YLENSMTLK----GHHKFGYLIGEVLRPRPGDPQKRIWKGEYSLLRSELINSMKPQIGKP 128
           YLE + T+K    G  K G+L GEV +P   DP+ + W+ E S++   LINSM+  IGKP
Sbjct: 52  YLEWAQTVKLVIDGKGKLGHLTGEVKKPANNDPRLKSWRSENSMVIPWLINSMESSIGKP 111

Query: 129 LLYAATSRDIRDTIQ 140
            L+  T++++ D ++
Sbjct: 112 FLFIPTTKEVWDVVR 126

[Close]
BLAST of MELO3C020201 vs. TrEMBL
Match: A5BR86_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_010116 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 7.7e-06
Identity = 31/69 (44.93%), Postives = 42/69 (60.87%), Query Frame = 1 

Query: 76  LKGHHKFGYLIGEVLRPRPGDPQKRIWKGEYSLLRSELINSMKPQIGKPLLYAATSRDIR 135
           LKG  K  YLIG  + P+PGDP    W  E S++ +   NSM P+I    ++ AT++DI 
Sbjct: 2   LKGKWKINYLIG--IGPKPGDPHFEAWDEEDSMIMAWSWNSMTPEISDTCMFLATAKDIW 61

Query: 136 DTIQKLSSK 145
           DTIQ+  SK
Sbjct: 62  DTIQQTYSK 68

[Close]
BLAST of MELO3C020201 vs. NCBI nr
Match: gi|659127950|ref|XP_008463973.1| (PREDICTED: uncharacterized protein LOC103501966 [Cucumis melo])

HSP 1 Score: 88.6 bits (218), Expect = 9.9e-15
Identity = 44/72 (61.11%), Postives = 52/72 (72.22%), Query Frame = 1 

Query: 74  MTLKGHHKFGYLIGEVLRPRPGDPQKRIWKGEYSLLRSELINSMKPQIGKPLLYAATSRD 133
           M L+GHHKF +L GE+ R  PGDPQ+  WKGE SL+ S LINSM+PQIGK LLY  T +D
Sbjct: 27  MILEGHHKFDFLTGEIPRLPPGDPQEWYWKGEDSLILSLLINSMEPQIGKLLLYVVTVKD 86

Query: 134 IRDTIQKLSSKR 146
           + D  QKL  KR
Sbjct: 87  VWDMAQKLYCKR 98

[Close]
BLAST of MELO3C020201 vs. NCBI nr
Match: gi|147770259|emb|CAN71862.1| (hypothetical protein VITISV_003938 [Vitis vinifera])

HSP 1 Score: 62.0 bits (149), Expect = 9.9e-07
Identity = 26/65 (40.00%), Postives = 44/65 (67.69%), Query Frame = 1 

Query: 81  KFGYLIGEVLRPRPGDPQKRIWKGEYSLLRSELINSMKPQIGKPLLYAATSRDIRDTIQK 140
           K GY++G +  P+  +P   +W  E S++ S L+NS++P+IGKP L+ +T++DI D + K
Sbjct: 176 KMGYILGMIKAPKTTNPLFELWDSENSMIMSWLLNSIQPEIGKPFLFLSTAKDIWDAVVK 235

Query: 141 LSSKR 146
             SK+
Sbjct: 236 AYSKK 240

[Close]
BLAST of MELO3C020201 vs. NCBI nr
Match: gi|147794410|emb|CAN75995.1| (hypothetical protein VITISV_005355 [Vitis vinifera])

HSP 1 Score: 60.5 bits (145), Expect = 2.9e-06
Identity = 30/75 (40.00%), Postives = 47/75 (62.67%), Query Frame = 1 

Query: 69  YLENSMTLK----GHHKFGYLIGEVLRPRPGDPQKRIWKGEYSLLRSELINSMKPQIGKP 128
           YLE + T+K    G  K G+L GEV +P   DP+ + W+ E S++   LINSM+  IGKP
Sbjct: 52  YLEWAQTVKLVIDGKGKLGHLTGEVKKPANNDPRLKSWRSENSMVIPWLINSMESSIGKP 111

Query: 129 LLYAATSRDIRDTIQ 140
            L+  T++++ D ++
Sbjct: 112 FLFIPTTKEVWDVVR 126

The following BLAST results are available for this feature:
BLAST of MELO3C020201 vs. TrEMBL
Match NameE-valueIdentityDescription
A5AZK9_VITVI6.9e-0740.00Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003938 PE=4 SV=1[more]
A5ASK2_VITVI2.0e-0640.00Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_005355 PE=4 SV=1[more]
A5BR86_VITVI7.7e-0644.93Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_010116 PE=4 SV=1[more]
BLAST of MELO3C020201 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659127950|ref|XP_008463973.1|9.9e-1561.11PREDICTED: uncharacterized protein LOC103501966 [Cucumis melo][more]
gi|147770259|emb|CAN71862.1|9.9e-0740.00hypothetical protein VITISV_003938 [Vitis vinifera][more]
gi|147794410|emb|CAN75995.1|2.9e-0640.00hypothetical protein VITISV_005355 [Vitis vinifera][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C020201T1MELO3C020201T1mRNA