MELO3C020194.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C020194.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionZf-CCHC domain-containing protein/UBN2 domain-containing protein
Locationchr06 : 17070289 .. 17070801 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTATGAAGGAGCAGTTAGAGGATGAGTCCAAAAAGAAGAAGAGCATTGCATTAAAGACCATCTCCTTGGAGGTTGATCTCGAAGATGAGGATGACCTTGATGTAGATGACATTGCTTATTTCTCACGTAAGTACAAAAATTTCATAAAAAGGAAGAAATATTTCAAGGAACAGCTATCAACTCAAAAAGAGTCAAAAGGTGAGAAAAGCAAAAAGGATGAGGTGATTTGTTATGCATGCAAAAAGTCGGGTCACATAAGAACAAATTTCTCTCTCTTGAAGGCTACTTGGGATGATAGTAGTGAAAGTGAAAGTGAAGTTGAAGAAATGGAAAACCTTGGTCTCATGGCTCATAGTAACAAAGAAGATGAACATGATGATGAGGTAACTCTAGAACCTCCTTCTATTGATGAATTGTTTGAAATGTTTGAAAGCATGCAAAATGACCTAGATTATTAAAAATTATTCTTAGTTCTAAATATGTTGTGCTTAAAAAGAAATAGAATGTTTTAA

mRNA sequence

ATTATGAAGGAGCAGTTAGAGGATGAGTCCAAAAAGAAGAAGAGCATTGCATTAAAGACCATCTCCTTGGAGGTTGATCTCGAAGATGAGGATGACCTTGATGTAGATGACATTGCTTATTTCTCACGTAAGTACAAAAATTTCATAAAAAGGAAGAAATATTTCAAGGAACAGCTATCAACTCAAAAAGAGTCAAAAGGTGAGAAAAGCAAAAAGGATGAGGTGATTTGTTATGCATGCAAAAAGTCGGGTCACATAAGAACAAATTTCTCTCTCTTGAAGGCTACTTGGGATGATAGTAGTGAAAGTGAAAGTGAAGTTGAAGAAATGGAAAACCTTGGTCTCATGGCTCATAGTAACAAAGAAGATGAACATGATGATGAGGTAACTCTAGAACCTCCTTCTATTGATGAATTGTTTGAAATGTTTGAAAGCATGCAAAATGACCTAGATTATTAAAAATTATTCTTAGTTCTAAATATGTTGTGCTTAAAAAGAAATAGAATGTTTTAA

Coding sequence (CDS)

ATGAAGGAGCAGTTAGAGGATGAGTCCAAAAAGAAGAAGAGCATTGCATTAAAGACCATCTCCTTGGAGGTTGATCTCGAAGATGAGGATGACCTTGATGTAGATGACATTGCTTATTTCTCACGTAAGTACAAAAATTTCATAAAAAGGAAGAAATATTTCAAGGAACAGCTATCAACTCAAAAAGAGTCAAAAGGTGAGAAAAGCAAAAAGGATGAGGTGATTTGTTATGCATGCAAAAAGTCGGGTCACATAAGAACAAATTTCTCTCTCTTGAAGGCTACTTGGGATGATAGTAGTGAAAGTGAAAGTGAAGTTGAAGAAATGGAAAACCTTGGTCTCATGGCTCATAGTAACAAAGAAGATGAACATGATGATGAGGTAACTCTAGAACCTCCTTCTATTGATGAATTGTTTGAAATGTTTGAAAGCATGCAAAATGACCTAGATTATTAA

Protein sequence

MKEQLEDESKKKKSIALKTISLEVDLEDEDDLDVDDIAYFSRKYKNFIKRKKYFKEQLSTQKESKGEKSKKDEVICYACKKSGHIRTNFSLLKATWDDSSESESEVEEMENLGLMAHSNKEDEHDDEVTLEPPSIDELFEMFESMQNDLDY
Homology
[Close]
BLAST of MELO3C020194.2 vs. NCBI nr
Match: XP_011648465.1 (PREDICTED: uncharacterized protein LOC105434474 [Cucumis sativus] >XP_011658429.1 PREDICTED: uncharacterized protein LOC105434435 [Cucumis sativus])

HSP 1 Score: 195.3 bits (495), Expect = 1.5e-46
Identity = 110/161 (68.32%), Postives = 118/161 (73.29%), Query Frame = 0 

Query: 1   MKEQLEDESKKXXXXXXXXXXXXXXXXXXXXXXXXDIAYFSRKYKNFIKRKKYFKEQLST 60
           MKE LEDESKK                        DIAYFSRKYKNFIKRKKYFK+ LST
Sbjct: 217 MKEHLEDESKKKKSIALKTISLEVDPEDEDGLDEDDIAYFSRKYKNFIKRKKYFKKHLST 276

Query: 61  QKESKGEKSKKDEVICYACKKSGHIRTNFSLLKA-----------TWDDSSESESEVEEM 120
           QKESKGEKSKKDEVICY CK+SGHIRT+  LLK+           TWDDSSESESEVEEM
Sbjct: 277 QKESKGEKSKKDEVICYECKRSGHIRTDCPLLKSSKKXXXXXXXXTWDDSSESESEVEEM 336

Query: 121 ENLGLMAHSNKEDEHDDEVTLEPPSIDELFEMFESMQNDLD 151
            NLGLMAHS+K+DEHDD+VTLEP SIDELFE FESMQNDL+
Sbjct: 337 ANLGLMAHSDKDDEHDDKVTLEPLSIDELFENFESMQNDLE 377

[Close]
BLAST of MELO3C020194.2 vs. NCBI nr
Match: XP_011652782.1 (PREDICTED: uncharacterized protein LOC105435092 [Cucumis sativus])

HSP 1 Score: 195.3 bits (495), Expect = 1.5e-46
Identity = 110/161 (68.32%), Postives = 118/161 (73.29%), Query Frame = 0 

Query: 1   MKEQLEDESKKXXXXXXXXXXXXXXXXXXXXXXXXDIAYFSRKYKNFIKRKKYFKEQLST 60
           MKE LEDESKK                        DIAYFSRKYKNFIKRKKYFK+ LST
Sbjct: 217 MKEHLEDESKKKKSIALKTISLEVDPEDEDGLDEDDIAYFSRKYKNFIKRKKYFKKHLST 276

Query: 61  QKESKGEKSKKDEVICYACKKSGHIRTNFSLLKA-----------TWDDSSESESEVEEM 120
           QKESKGEKSKKDEVICY CK+SGHIRT+  LLK+           TWDDSSESESEVEEM
Sbjct: 277 QKESKGEKSKKDEVICYECKRSGHIRTDCPLLKSSKKXXXXXXXXTWDDSSESESEVEEM 336

Query: 121 ENLGLMAHSNKEDEHDDEVTLEPPSIDELFEMFESMQNDLD 151
            NLGLMAHS+K+DEHDD+VTLEP SIDELFE FESMQNDL+
Sbjct: 337 ANLGLMAHSDKDDEHDDKVTLEPLSIDELFENFESMQNDLE 377

[Close]
BLAST of MELO3C020194.2 vs. NCBI nr
Match: XP_011656224.1 (PREDICTED: uncharacterized protein LOC105435679 [Cucumis sativus])

HSP 1 Score: 195.3 bits (495), Expect = 1.5e-46
Identity = 110/161 (68.32%), Postives = 118/161 (73.29%), Query Frame = 0 

Query: 1   MKEQLEDESKKXXXXXXXXXXXXXXXXXXXXXXXXDIAYFSRKYKNFIKRKKYFKEQLST 60
           MKE LEDESKK                        DIAYFSRKYKNFIKRKKYFK+ LST
Sbjct: 150 MKEHLEDESKKKKSIALKTISLEVDPEDEDGLDEDDIAYFSRKYKNFIKRKKYFKKHLST 209

Query: 61  QKESKGEKSKKDEVICYACKKSGHIRTNFSLLKA-----------TWDDSSESESEVEEM 120
           QKESKGEKSKKDEVICY CK+SGHIRT+  LLK+           TWDDSSESESEVEEM
Sbjct: 210 QKESKGEKSKKDEVICYECKRSGHIRTDCPLLKSSKKXXXXXXXXTWDDSSESESEVEEM 269

Query: 121 ENLGLMAHSNKEDEHDDEVTLEPPSIDELFEMFESMQNDLD 151
            NLGLMAHS+K+DEHDD+VTLEP SIDELFE FESMQNDL+
Sbjct: 270 ANLGLMAHSDKDDEHDDKVTLEPLSIDELFENFESMQNDLE 310

[Close]
BLAST of MELO3C020194.2 vs. NCBI nr
Match: XP_011659859.1 (PREDICTED: uncharacterized protein LOC105436302 [Cucumis sativus])

HSP 1 Score: 195.3 bits (495), Expect = 1.5e-46
Identity = 110/161 (68.32%), Postives = 118/161 (73.29%), Query Frame = 0 

Query: 1   MKEQLEDESKKXXXXXXXXXXXXXXXXXXXXXXXXDIAYFSRKYKNFIKRKKYFKEQLST 60
           MKE LEDESKK                        DIAYFSRKYKNFIKRKKYFK+ LST
Sbjct: 217 MKEHLEDESKKKKSIALKTISLEVDPEDEDGLDEDDIAYFSRKYKNFIKRKKYFKKHLST 276

Query: 61  QKESKGEKSKKDEVICYACKKSGHIRTNFSLLKA-----------TWDDSSESESEVEEM 120
           QKESKGEKSKKDEVICY CK+SGHIRT+  LLK+           TWDDSSESESEVEEM
Sbjct: 277 QKESKGEKSKKDEVICYECKRSGHIRTDCPLLKSSKKXXXXXXXXTWDDSSESESEVEEM 336

Query: 121 ENLGLMAHSNKEDEHDDEVTLEPPSIDELFEMFESMQNDLD 151
            NLGLMAHS+K+DEHDD+VTLEP SIDELFE FESMQNDL+
Sbjct: 337 ANLGLMAHSDKDDEHDDKVTLEPLSIDELFENFESMQNDLE 377

[Close]
BLAST of MELO3C020194.2 vs. NCBI nr
Match: XP_011659862.1 (PREDICTED: uncharacterized protein LOC105436307, partial [Cucumis sativus])

HSP 1 Score: 159.8 bits (403), Expect = 7.1e-36
Identity = 91/138 (65.94%), Postives = 97/138 (70.29%), Query Frame = 0 

Query: 1   MKEQLEDESKKXXXXXXXXXXXXXXXXXXXXXXXXDIAYFSRKYKNFIKRKKYFKEQLST 60
           MKE LEDESKK                        DIAYFSRKYKNFIKRKKYFK+ LST
Sbjct: 187 MKEHLEDESKKKKSIALKTISLEVDPEDEDGLDEDDIAYFSRKYKNFIKRKKYFKKHLST 246

Query: 61  QKESKGEKSKKDEVICYACKKSGHIRTNFSLL-----------KATWDDSSESESEVEEM 120
           QKESKGEKSKKDEVICY CK+SGHIRT+  LL           KATWDDSSESESEVEEM
Sbjct: 247 QKESKGEKSKKDEVICYECKRSGHIRTDCPLLKSSKKSXXXXMKATWDDSSESESEVEEM 306

Query: 121 ENLGLMAHSNKEDEHDDE 128
            NLGLMAHS+K+DEHDD+
Sbjct: 307 ANLGLMAHSDKDDEHDDK 324

[Close]
BLAST of MELO3C020194.2 vs. TrEMBL
Match: tr|A0A2N9GWD8|A0A2N9GWD8_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS31506 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 2.0e-07
Identity = 41/106 (38.68%), Postives = 57/106 (53.77%), Query Frame = 0 

Query: 41  SRKYKNFIKRKKYFKEQLSTQKESKGEKSKKDEVICYACKKSGHIRTNF----------- 100
           +RK+K F+K+KK F  +   + E+ GE SK +  ICY CKK GH +              
Sbjct: 109 TRKFKKFLKKKKGFGRRFPKKGENSGESSKNESPICYKCKKPGHYKNECPQVDKENMKYK 168

Query: 101 -SLLKATWDDS----SESESEVEEMENLGLMAHSNKEDEHDDEVTL 131
              LKATWDDS    S+++S   E+ NL L+ + NK D  +DE  L
Sbjct: 169 KKALKATWDDSNGSDSDNDSSDNEIANLCLLGYINKSDTSEDEDNL 214

[Close]
BLAST of MELO3C020194.2 vs. TrEMBL
Match: tr|A0A2N9GR67|A0A2N9GR67_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS29703 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 3.9e-06
Identity = 38/103 (36.89%), Postives = 57/103 (55.34%), Query Frame = 0 

Query: 41  SRKYKNFIKRKKYFKEQLSTQKESKGEKSKKDEVICYACKKSGHIRTNF----------- 100
           +RK+K F+K+KK F  +   + E++ E SK +  ICY CKK GH + +            
Sbjct: 10  TRKFKKFLKKKKGFGRRFPKRVENRAESSKNEPPICYKCKKPGHYKNDCPQIDKENTKYK 69

Query: 101 -SLLKATWDDS----SESESEVEEMENLGLMAHSNKEDEHDDE 128
             +LKATWDDS    S+++S   E+ NL L+ + N  D  +DE
Sbjct: 70  RKVLKATWDDSNGSDSDNDSSDNEIANLCLLGYINGSDTSEDE 112

[Close]
BLAST of MELO3C020194.2 vs. TrEMBL
Match: tr|A0A2N9EI00|A0A2N9EI00_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2285 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 6.6e-06
Identity = 39/107 (36.45%), Postives = 57/107 (53.27%), Query Frame = 0 

Query: 37  IAYFSRKYKNFIKRKKYFKEQLSTQKESKGEKSKKDEVICYACKKSGHIRTNF------- 96
           IA  +RK++ F+K K  F  + S + E+KGE SKK+ +ICY CKK GH +          
Sbjct: 164 IALMTRKFQKFLKMKNPFGIRFSERDENKGESSKKEPLICYKCKKLGHFKNECPQMEKDN 223

Query: 97  -----SLLKATWDD----SSESESEVEEMENLGLMAHSNKEDEHDDE 128
                  LKA WDD      + +S   E+ NL L+ + N+ D+ +DE
Sbjct: 224 MKYKKKALKAAWDDFDGSDLDEDSNDNEIANLFLLGYINELDKSEDE 270

[Close]
BLAST of MELO3C020194.2 vs. TrEMBL
Match: tr|A0A1Q3BXI1|A0A1Q3BXI1_CEPFO (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_16109 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 8.6e-06
Identity = 50/133 (37.59%), Postives = 66/133 (49.62%), Query Frame = 0 

Query: 37  IAYFSRKYKNFIKRKKYF-KEQLSTQKESKGEKSKKD----EVICYACKKSGHIRTNFSL 96
           +A  +++ K  +  KK F K        +KG+ SKKD    E+ICY C K GH R     
Sbjct: 1   MALLTKRIKKILMNKKNFSKNPFKKFHSNKGDSSKKDKEDKEIICYECDKPGHTRPECPK 60

Query: 97  LK------------ATWDDSSE--SESEVEEMENLGLMAHSNKEDEHDDEVTLEPPSIDE 151
           LK            ATW DS E  SE E+EE+ N+ LMA    EDE D EVT    S +E
Sbjct: 61  LKKRKDFFKNKAMIATWSDSDESSSEQEIEEVANMALMA---IEDESDHEVTTSSLSFNE 120

[Close]
BLAST of MELO3C020194.2 vs. TrEMBL
Match: tr|A0A2N9GVA6|A0A2N9GVA6_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS31504 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.9e-05
Identity = 36/95 (37.89%), Postives = 51/95 (53.68%), Query Frame = 0 

Query: 41  SRKYKNFIKRKKYFKEQLSTQKESKGEKSKKDEVICYACKKSGHIRTNF----------- 100
           +RK+K F+K+KK F  +   + E+ GE SK +  ICY CKK GH +              
Sbjct: 130 TRKFKKFLKKKKGFGRRFPKKGENSGESSKNESPICYKCKKPGHYKNECPQVDKENMKYK 189

Query: 101 -SLLKATWDDS----SESESEVEEMENLGLMAHSN 120
              LKATWDDS    S+++S   E+ NL L+ + N
Sbjct: 190 KKALKATWDDSNGSDSDNDSSDNEIANLCLLGYIN 224

The following BLAST results are available for this feature:
BLAST of MELO3C020194.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011648465.11.5e-4668.32PREDICTED: uncharacterized protein LOC105434474 [Cucumis sativus] >XP_011658429.... [more]
XP_011652782.11.5e-4668.32PREDICTED: uncharacterized protein LOC105435092 [Cucumis sativus][more]
XP_011656224.11.5e-4668.32PREDICTED: uncharacterized protein LOC105435679 [Cucumis sativus][more]
XP_011659859.11.5e-4668.32PREDICTED: uncharacterized protein LOC105436302 [Cucumis sativus][more]
XP_011659862.17.1e-3665.94PREDICTED: uncharacterized protein LOC105436307, partial [Cucumis sativus][more]
BLAST of MELO3C020194.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C020194.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C020194.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A2N9GWD8|A0A2N9GWD8_FAGSY2.0e-0738.68Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS31506 PE=4 SV=1[more]
tr|A0A2N9GR67|A0A2N9GR67_FAGSY3.9e-0636.89Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS29703 PE=4 SV=1[more]
tr|A0A2N9EI00|A0A2N9EI00_FAGSY6.6e-0636.45Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2285 PE=4 SV=1[more]
tr|A0A1Q3BXI1|A0A1Q3BXI1_CEPFO8.6e-0637.59Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_16109 PE=4... [more]
tr|A0A2N9GVA6|A0A2N9GVA6_FAGSY1.9e-0537.89Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS31504 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C020194.2.1MELO3C020194.2.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C020194.2Silver-seed gourdcarmedB0489
MELO3C020194.2Cucumber (Chinese Long) v3cucmedB247
MELO3C020194.2Watermelon (97103) v2medwmbB424
MELO3C020194.2Watermelon (97103) v2medwmbB437
MELO3C020194.2Wax gourdmedwgoB540
MELO3C020194.2Wax gourdmedwgoB546
MELO3C020194.2Cucumber (Gy14) v2cgybmedB216
MELO3C020194.2Cucumber (Gy14) v1cgymedB003
MELO3C020194.2Cucurbita maxima (Rimu)cmamedB274
MELO3C020194.2Cucurbita maxima (Rimu)cmamedB496
MELO3C020194.2Cucurbita moschata (Rifu)cmomedB259
MELO3C020194.2Cucurbita moschata (Rifu)cmomedB261
MELO3C020194.2Cucurbita moschata (Rifu)cmomedB483
MELO3C020194.2Cucurbita pepo (Zucchini)cpemedB630
MELO3C020194.2Cucurbita pepo (Zucchini)cpemedB692
MELO3C020194.2Cucurbita pepo (Zucchini)cpemedB694
MELO3C020194.2Wild cucumber (PI 183967)cpimedB240
MELO3C020194.2Cucumber (Chinese Long) v2cumedB239
MELO3C020194.2Bottle gourd (USVL1VR-Ls)lsimedB384
MELO3C020194.2Bottle gourd (USVL1VR-Ls)lsimedB406
MELO3C020194.2Watermelon (Charleston Gray)medwcgB417
MELO3C020194.2Watermelon (Charleston Gray)medwcgB431
MELO3C020194.2Watermelon (97103) v1medwmB448
MELO3C020194.2Watermelon (97103) v1medwmB462