MELO3C020193 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C020193
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionSenescence-associated family protein
Locationchr6 : 16025779 .. 16026018 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGCCCAGTGGCGGAAACCAGCTGCACATGCTTCAATTGACCGCCCATGCGCCGCCGCCCAATGCCTCCACTACTCAGCTGGTCTACTCCCACCTGTCTTCTCAAGTCCAACCACAATATCCTTCTGGTCCGCCGCACCACCGCTGCCATCAGTTTATGGACTGCCATCATTTCATGCACCATTGTCCTTTGACTCTTTACAGCAGTCACATGTCCATGGGACCAAGACTGATCTAG

mRNA sequence

ATGCAGCCCAGTGGCGGAAACCAGCTGCACATGCTTCAATTGACCGCCCATGCGCCGCCGCCCAATGCCTCCACTACTCAGCTGGTCTACTCCCACCTGTCTTCTCAAGTCCAACCACAATATCCTTCTGGTCCGCCGCACCACCGCTGCCATCAGTTTATGGACTGCCATCATTTCATGCACCATTGTCCTTTGACTCTTTACAGCAGTCACATGTCCATGGGACCAAGACTGATCTAG

Coding sequence (CDS)

ATGCAGCCCAGTGGCGGAAACCAGCTGCACATGCTTCAATTGACCGCCCATGCGCCGCCGCCCAATGCCTCCACTACTCAGCTGGTCTACTCCCACCTGTCTTCTCAAGTCCAACCACAATATCCTTCTGGTCCGCCGCACCACCGCTGCCATCAGTTTATGGACTGCCATCATTTCATGCACCATTGTCCTTTGACTCTTTACAGCAGTCACATGTCCATGGGACCAAGACTGATCTAG

Protein sequence

MQPSGGNQLHMLQLTAHAPPPNASTTQLVYSHLSSQVQPQYPSGPPHHRCHQFMDCHHFMHHCPLTLYSSHMSMGPRLI*
Homology
[Close]
BLAST of MELO3C020193 vs. TrEMBL
Match: A0A0A0LAR4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G284030 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 6.3e-49
Identity = 96/109 (88.07%), Postives = 100/109 (91.74%), Query Frame = 1 

Query: 54  LLTAKVKVSSRGQRNSYGKSWRFTMSRRPAVLCFSTGTDRTETEECFRPYDSSAGLRCAQ 113
           ++T KVKVSS  QRNSYGK W FT+SRRPAVLCFSTGTD  ETEECFRPYDSSAGLRCAQ
Sbjct: 13  VVTKKVKVSSHRQRNSYGKPWSFTLSRRPAVLCFSTGTDHRETEECFRPYDSSAGLRCAQ 72

Query: 114 TGDDEDDQPTVCERAIKSNPGIVEACRFAYNDAKFVNERARNDIVLLSR 163
           TGDDEDDQPT C+R IKSNPGIVEACRFAYNDAKFVNERARNDIVLLSR
Sbjct: 73  TGDDEDDQPTFCKRTIKSNPGIVEACRFAYNDAKFVNERARNDIVLLSR 121

[Close]
BLAST of MELO3C020193 vs. TrEMBL
Match: A0A0A0LAR4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G284030 PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 5.7e-18
Identity = 75/167 (44.91%), Postives = 80/167 (47.90%), Query Frame = 1 

Query: 1   MALTAIKVSSSPVVTSKAIVS-----NSYGVFSSLSKSEREKLNPSSCRVDIGELHGCLL 60
           MALTAIKVSSSPVVT K  VS     NSYG   S + S R  +   S   D  E   C  
Sbjct: 1   MALTAIKVSSSPVVTKKVKVSSHRQRNSYGKPWSFTLSRRPAVLCFSTGTDHRETEECF- 60

Query: 61  TAKVKVSSRGQRNSYGKSWRFTMSRRPAVLCFSTGTDRTETEECFRPYDSSAGLRCAQTG 120
             +   SS G R                  C  TG D  +                    
Sbjct: 61  --RPYDSSAGLR------------------CAQTGDDEDDQ------------------- 120

Query: 121 DDEDDQPTVCERAIKSNPGIVEACRFAYNDAKFVNERARNDIVLLSR 163
                 PT C+R IKSNPGIVEACRFAYNDAKFVNERARNDIVLLSR
Sbjct: 121 ------PTFCKRTIKSNPGIVEACRFAYNDAKFVNERARNDIVLLSR 121


HSP 2 Score: 142.9 bits (359), Expect = 3.5e-31
Identity = 80/164 (48.78%), Postives = 104/164 (63.41%), Query Frame = 1 

Query: 1   MALTAIKVSSSPVVTSKAIVSNSYGVFSSLSKS-EREKLNPSSCRVDIGELHGC-LLTAK 60
           MAL A KVSSSP VT + + S S+G+  S SKS ++ KL+P+   +++ +L    LLTAK
Sbjct: 1   MALNASKVSSSPFVTQRKLTSTSHGIICSFSKSFQKNKLHPTHQGIELQQLSSKHLLTAK 60

Query: 61  VKVSSRGQRNSYGKSWRFTMSRRPAVLCFSTGTDRTETEECFRPYDSSAGLRCAQTGDDE 120
           +  S    +  +GK     +SRR + LC ST T RTE +EC RPY  S+    AQ G+ E
Sbjct: 61  LAFSGESLQGIHGKPVSLIISRRSSTLCQSTRTHRTEEKECTRPYSDSSDSSRAQVGEKE 120

Query: 121 DDQPTVCERAIKSNPGIVEACRFAYNDAKFVNERARNDIVLLSR 163
           D+   +  R I S   + EACRF YNDAKFVNERARNDI+LLSR
Sbjct: 121 DEHQLMSGRTIHSCHALAEACRFVYNDAKFVNERARNDIILLSR 164

[Close]
BLAST of MELO3C020193 vs. TrEMBL
Match: U5FHC8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0017s02970g PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 3.5e-31
Identity = 80/164 (48.78%), Postives = 104/164 (63.41%), Query Frame = 1 

Query: 1   MALTAIKVSSSPVVTSKAIVSNSYGVFSSLSKS-EREKLNPSSCRVDIGELHGC-LLTAK 60
           MAL A KVSSSP VT + + S S+G+  S SKS ++ KL+P+   +++ +L    LLTAK
Sbjct: 1   MALNASKVSSSPFVTQRKLTSTSHGIICSFSKSFQKNKLHPTHQGIELQQLSSKHLLTAK 60

Query: 61  VKVSSRGQRNSYGKSWRFTMSRRPAVLCFSTGTDRTETEECFRPYDSSAGLRCAQTGDDE 120
           +  S    +  +GK     +SRR + LC ST T RTE +EC RPY  S+    AQ G+ E
Sbjct: 61  LAFSGESLQGIHGKPVSLIISRRSSTLCQSTRTHRTEEKECTRPYSDSSDSSRAQVGEKE 120

Query: 121 DDQPTVCERAIKSNPGIVEACRFAYNDAKFVNERARNDIVLLSR 163
           D+   +  R I S   + EACRF YNDAKFVNERARNDI+LLSR
Sbjct: 121 DEHQLMSGRTIHSCHALAEACRFVYNDAKFVNERARNDIILLSR 164

[Close]
BLAST of MELO3C020193 vs. TrEMBL
Match: A0A067E6G9_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g036872mg PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 8.5e-30
Identity = 77/164 (46.95%), Postives = 106/164 (64.63%), Query Frame = 1 

Query: 1   MALTAIKVSSSPVVTSKAIVSNSYGVFSSLSKSE-REKLNPSSCRVDIGELH-GCLLTAK 60
           MALTA KVS+ PVV+ + I + S+G+  S +K+  + KL P+   +++ +L  G L   K
Sbjct: 1   MALTASKVSNGPVVSKEIITARSHGIVYSFAKTTVQHKLCPAIQGIELQQLSDGHLSAPK 60

Query: 61  VKVSSRGQRNSYGKSWRFTMSRRPAVLCFSTGTDRTETEECFRPYDSSAGLRCAQTGDDE 120
           +  S+ G  +  GK   F +SRR ++LCFS GT   E +EC RPY  S+ +   Q G+DE
Sbjct: 61  MSFSNEGLSSLSGKPISF-VSRRSSILCFSNGTRNAEAKECIRPYGDSSDVSSMQVGEDE 120

Query: 121 DDQPTVCERAIKSNPGIVEACRFAYNDAKFVNERARNDIVLLSR 163
           D+ P +  R I S+  + EAC+F YNDAKFVNERARNDIVLLSR
Sbjct: 121 DEHPVMPGRTIHSSQVLAEACKFVYNDAKFVNERARNDIVLLSR 163

[Close]
BLAST of MELO3C020193 vs. TrEMBL
Match: V4SSW4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10011587mg PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 1.9e-29
Identity = 77/164 (46.95%), Postives = 105/164 (64.02%), Query Frame = 1 

Query: 1   MALTAIKVSSSPVVTSKAIVSNSYGVFSSLSKSE-REKLNPSSCRVDIGELH-GCLLTAK 60
           MALTA KVS+ PVV+ + I S S+G+  S +K+  + KL P+   +++ +L  G L   K
Sbjct: 1   MALTASKVSNGPVVSKEIITSRSHGIVYSFAKTTVQHKLCPAIQGIELQQLSDGHLSAPK 60

Query: 61  VKVSSRGQRNSYGKSWRFTMSRRPAVLCFSTGTDRTETEECFRPYDSSAGLRCAQTGDDE 120
           +  S+ G  +  GK   F +SRR ++LCFS GT   E +EC RPY  S+ +   Q  +DE
Sbjct: 61  MSFSNEGLSSLSGKPISF-VSRRSSILCFSNGTRNAEAKECIRPYGDSSDVSSMQVAEDE 120

Query: 121 DDQPTVCERAIKSNPGIVEACRFAYNDAKFVNERARNDIVLLSR 163
           D+ P +  R I S+  + EAC+F YNDAKFVNERARNDIVLLSR
Sbjct: 121 DEHPVMPGRTIHSSQVLAEACKFVYNDAKFVNERARNDIVLLSR 163

[Close]
BLAST of MELO3C020193 vs. NCBI nr
Match: gi|659114299|ref|XP_008457000.1| (PREDICTED: uncharacterized protein LOC103496788 isoform X1 [Cucumis melo])

HSP 1 Score: 326.2 bits (835), Expect = 3.2e-86
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 1 

Query: 1   MALTAIKVSSSPVVTSKAIVSNSYGVFSSLSKSEREKLNPSSCRVDIGELHGCLLTAKVK 60
           MALTAIKVSSSPVVTSKAIVSNSYGVFSSLSKSEREKLNPSSCRVDIGELHGCLLTAKVK
Sbjct: 1   MALTAIKVSSSPVVTSKAIVSNSYGVFSSLSKSEREKLNPSSCRVDIGELHGCLLTAKVK 60

Query: 61  VSSRGQRNSYGKSWRFTMSRRPAVLCFSTGTDRTETEECFRPYDSSAGLRCAQTGDDEDD 120
           VSSRGQRNSYGKSWRFTMSRRPAVLCFSTGTDRTETEECFRPYDSSAGLRCAQTGDDEDD
Sbjct: 61  VSSRGQRNSYGKSWRFTMSRRPAVLCFSTGTDRTETEECFRPYDSSAGLRCAQTGDDEDD 120

Query: 121 QPTVCERAIKSNPGIVEACRFAYNDAKFVNERARNDIVLLSR 163
           QPTVCERAIKSNPGIVEACRFAYNDAKFVNERARNDIVLLSR
Sbjct: 121 QPTVCERAIKSNPGIVEACRFAYNDAKFVNERARNDIVLLSR 162

[Close]
BLAST of MELO3C020193 vs. NCBI nr
Match: gi|778680723|ref|XP_011651381.1| (PREDICTED: uncharacterized protein LOC101207516 isoform X1 [Cucumis sativus])

HSP 1 Score: 304.7 bits (779), Expect = 9.8e-80
Identity = 151/162 (93.21%), Postives = 153/162 (94.44%), Query Frame = 1 

Query: 1   MALTAIKVSSSPVVTSKAIVSNSYGVFSSLSKSEREKLNPSSCRVDIGELHGCLLTAKVK 60
           MALTAIKVSSSPVVTSKAIVSNSYGVFSSLSKSEREKLNPSSCRVDIGELHGCLLT KVK
Sbjct: 21  MALTAIKVSSSPVVTSKAIVSNSYGVFSSLSKSEREKLNPSSCRVDIGELHGCLLTEKVK 80

Query: 61  VSSRGQRNSYGKSWRFTMSRRPAVLCFSTGTDRTETEECFRPYDSSAGLRCAQTGDDEDD 120
           VSS  QRNSYGK W FT+SRRPAVLCFSTGTD  ETEECFRPYDSSAGLRCAQTGDDEDD
Sbjct: 81  VSSHRQRNSYGKPWSFTLSRRPAVLCFSTGTDHRETEECFRPYDSSAGLRCAQTGDDEDD 140

Query: 121 QPTVCERAIKSNPGIVEACRFAYNDAKFVNERARNDIVLLSR 163
           QPT C+R IKSNPGIVEACRFAYNDAKFVNERARNDIVLLSR
Sbjct: 141 QPTFCKRTIKSNPGIVEACRFAYNDAKFVNERARNDIVLLSR 182

[Close]
BLAST of MELO3C020193 vs. NCBI nr
Match: gi|778680726|ref|XP_011651382.1| (PREDICTED: uncharacterized protein LOC101207516 isoform X2 [Cucumis sativus])

HSP 1 Score: 304.7 bits (779), Expect = 9.8e-80
Identity = 151/162 (93.21%), Postives = 153/162 (94.44%), Query Frame = 1 

Query: 1   MALTAIKVSSSPVVTSKAIVSNSYGVFSSLSKSEREKLNPSSCRVDIGELHGCLLTAKVK 60
           MALTAIKVSSSPVVTSKAIVSNSYGVFSSLSKSEREKLNPSSCRVDIGELHGCLLT KVK
Sbjct: 1   MALTAIKVSSSPVVTSKAIVSNSYGVFSSLSKSEREKLNPSSCRVDIGELHGCLLTEKVK 60

Query: 61  VSSRGQRNSYGKSWRFTMSRRPAVLCFSTGTDRTETEECFRPYDSSAGLRCAQTGDDEDD 120
           VSS  QRNSYGK W FT+SRRPAVLCFSTGTD  ETEECFRPYDSSAGLRCAQTGDDEDD
Sbjct: 61  VSSHRQRNSYGKPWSFTLSRRPAVLCFSTGTDHRETEECFRPYDSSAGLRCAQTGDDEDD 120

Query: 121 QPTVCERAIKSNPGIVEACRFAYNDAKFVNERARNDIVLLSR 163
           QPT C+R IKSNPGIVEACRFAYNDAKFVNERARNDIVLLSR
Sbjct: 121 QPTFCKRTIKSNPGIVEACRFAYNDAKFVNERARNDIVLLSR 162

[Close]
BLAST of MELO3C020193 vs. NCBI nr
Match: gi|659114303|ref|XP_008457002.1| (PREDICTED: uncharacterized protein LOC103496788 isoform X2 [Cucumis melo])

HSP 1 Score: 221.9 bits (564), Expect = 8.4e-55
Identity = 106/109 (97.25%), Postives = 108/109 (99.08%), Query Frame = 1 

Query: 54  LLTAKVKVSSRGQRNSYGKSWRFTMSRRPAVLCFSTGTDRTETEECFRPYDSSAGLRCAQ 113
           ++T KVKVSSRGQRNSYGKSWRFTMSRRPAVLCFSTGTDRTETEECFRPYDSSAGLRCAQ
Sbjct: 13  VVTTKVKVSSRGQRNSYGKSWRFTMSRRPAVLCFSTGTDRTETEECFRPYDSSAGLRCAQ 72

Query: 114 TGDDEDDQPTVCERAIKSNPGIVEACRFAYNDAKFVNERARNDIVLLSR 163
           TGDDEDDQPTVCERAIKSNPGIVEACRFAYNDAKFVNERARNDIVLLSR
Sbjct: 73  TGDDEDDQPTVCERAIKSNPGIVEACRFAYNDAKFVNERARNDIVLLSR 121

[Close]
BLAST of MELO3C020193 vs. NCBI nr
Match: gi|659114303|ref|XP_008457002.1| (PREDICTED: uncharacterized protein LOC103496788 isoform X2 [Cucumis melo])

HSP 1 Score: 103.6 bits (257), Expect = 3.3e-19
Identity = 77/167 (46.11%), Postives = 82/167 (49.10%), Query Frame = 1 

Query: 1   MALTAIKVSSSPVVTSKAIVS-----NSYGVFSSLSKSEREKLNPSSCRVDIGELHGCLL 60
           MALTAIKVSSSPVVT+K  VS     NSYG     + S R  +   S   D  E   C  
Sbjct: 1   MALTAIKVSSSPVVTTKVKVSSRGQRNSYGKSWRFTMSRRPAVLCFSTGTDRTETEECF- 60

Query: 61  TAKVKVSSRGQRNSYGKSWRFTMSRRPAVLCFSTGTDRTETEECFRPYDSSAGLRCAQTG 120
             +   SS G R                  C  TG D  +                    
Sbjct: 61  --RPYDSSAGLR------------------CAQTGDDEDDQ------------------- 120

Query: 121 DDEDDQPTVCERAIKSNPGIVEACRFAYNDAKFVNERARNDIVLLSR 163
                 PTVCERAIKSNPGIVEACRFAYNDAKFVNERARNDIVLLSR
Sbjct: 121 ------PTVCERAIKSNPGIVEACRFAYNDAKFVNERARNDIVLLSR 121


HSP 2 Score: 201.8 bits (512), Expect = 9.0e-49
Identity = 96/109 (88.07%), Postives = 100/109 (91.74%), Query Frame = 1 

Query: 54  LLTAKVKVSSRGQRNSYGKSWRFTMSRRPAVLCFSTGTDRTETEECFRPYDSSAGLRCAQ 113
           ++T KVKVSS  QRNSYGK W FT+SRRPAVLCFSTGTD  ETEECFRPYDSSAGLRCAQ
Sbjct: 13  VVTKKVKVSSHRQRNSYGKPWSFTLSRRPAVLCFSTGTDHRETEECFRPYDSSAGLRCAQ 72

Query: 114 TGDDEDDQPTVCERAIKSNPGIVEACRFAYNDAKFVNERARNDIVLLSR 163
           TGDDEDDQPT C+R IKSNPGIVEACRFAYNDAKFVNERARNDIVLLSR
Sbjct: 73  TGDDEDDQPTFCKRTIKSNPGIVEACRFAYNDAKFVNERARNDIVLLSR 121

The following BLAST results are available for this feature:
BLAST of MELO3C020193 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LAR4_CUCSA6.3e-4988.07Uncharacterized protein OS=Cucumis sativus GN=Csa_3G284030 PE=4 SV=1[more]
A0A0A0LAR4_CUCSA5.7e-1844.91Uncharacterized protein OS=Cucumis sativus GN=Csa_3G284030 PE=4 SV=1[more]
U5FHC8_POPTR3.5e-3148.78Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0017s02970g PE=4 SV=1[more]
A0A067E6G9_CITSI8.5e-3046.95Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g036872mg PE=4 S... [more]
V4SSW4_9ROSI1.9e-2946.95Uncharacterized protein OS=Citrus clementina GN=CICLE_v10011587mg PE=4 SV=1[more]
BLAST of MELO3C020193 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659114299|ref|XP_008457000.1|3.2e-86100.00PREDICTED: uncharacterized protein LOC103496788 isoform X1 [Cucumis melo][more]
gi|778680723|ref|XP_011651381.1|9.8e-8093.21PREDICTED: uncharacterized protein LOC101207516 isoform X1 [Cucumis sativus][more]
gi|778680726|ref|XP_011651382.1|9.8e-8093.21PREDICTED: uncharacterized protein LOC101207516 isoform X2 [Cucumis sativus][more]
gi|659114303|ref|XP_008457002.1|8.4e-5597.25PREDICTED: uncharacterized protein LOC103496788 isoform X2 [Cucumis melo][more]
gi|659114303|ref|XP_008457002.1|3.3e-1946.11PREDICTED: uncharacterized protein LOC103496788 isoform X2 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU45373melon EST collection version 4.0transcribed_cluster
MU51902melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C020193T1MELO3C020193T1mRNA
MELO3C020193T2MELO3C020193T2mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU51902MU51902transcribed_cluster
MU45373MU45373transcribed_cluster