MELO3C020158 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C020158
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Glycerol-3-phosphate dehydrogenase [NAD(P)+]
Location	chr10 : 8906989 .. 8907809 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTGCGAAGCCAACGACAATTACTGGCCTCTCAGGCACAGGGGACATTATGCTTACATGCTTTGTCAACCTCTCCCGAAACAGAACAGTTGGAGTACGACTAGGATCTGGTGAGAATCTGGATGATATATTGAGCTCCATGAATCAGGTACCTGGGTAGTCTTTCATTATGTCAAGCAATTTTATGGTTTTTATTTATTGCCTCCTTGTTAAGGTCCCCCGATCAATAGGTTGCAGAAGGTGTATCGACTGCTGGGGCTGTAATTGCTTTGGCTCAGAAGTATAAGGTGAAAATGCCAGTTTTGACAGCAGTGGCCCGAATTATTGATAATGAGCTAACACCACAAAAAGCAGTCCTTGAATTGATGGGGCTTCCTCAGGTACCACTAGCTCTCGGACCGATAAGTAGAAAGTTTTTGAGCTTGATTAGATTGCTTTGAATCCTCATTTAAACTTCATTTAGGTGGAAGAGGTCTGAAACCTGGAGGCTTCAAAGGTCCTAAGCAATTAGAATCACAAAACATCTATGGCATCAAACATGGCCCGCAGATATTTGACTAGGACATTACAATAGTGGGATTTTTATTCGTCGAAGAAATCAGTCAGAAGTTGGTCTGTGAAACCTGCCAATTAATTGAGGACCGTCTTGTTCCTTTTGGAGATCAAACTATCTTTGATTCTTAGTAGTGGAATTCAACAAGTTTTGATATCTTAAAGTCACAATCATAAGAAACGTCAACCTTCTGTCTAATTCATTTCATTTTTGAATTTGACTAAAAAGTTGATCAAAGACCAACTTTTCATTTTTCTGTCTAGTTC

mRNA sequence

ATGGGTGCGAAGCCAACGACAATTACTGGCCTCTCAGGCACAGGGGACATTATGCTTACATGCTTTGTCAACCTCTCCCGAAACAGAACAGTTGGAGTACGACTAGGATCTGGTGAGAATCTGGATGATATATTGAGCTCCATGAATCAGGTTGCAGAAGGTGTATCGACTGCTGGGGCTGTAATTGCTTTGGCTCAGAAGTATAAGGTGAAAATGCCAGTTTTGACAGCAGTGGCCCGAATTATTGATAATGAGCTAACACCACAAAAAGCAGTCCTTGAATTGATGGGGCTTCCTCAGGTGGAAGAGGTCTGAAACCTGGAGGCTTCAAAGGTCCTAAGCAATTAGAATCACAAAACATCTATGGCATCAAACATGGCCCGCAGATATTTGACTAGGACATTACAATAGTGGGATTTTTATTCGTCGAAGAAATCAGTCAGAAGTTGGTCTGTGAAACCTGCCAATTAATTGAGGACCGTCTTGTTCCTTTTGGAGATCAAACTATCTTTGATTCTTAGTAGTGGAATTCAACAAGTTTTGATATCTTAAAGTCACAATCATAAGAAACGTCAACCTTCTGTCTAATTCATTTCATTTTTGAATTTGACTAAAAAGTTGATCAAAGACCAACTTTTCATTTTTCTGTCTAGTTC

Coding sequence (CDS)

ATGGGTGCGAAGCCAACGACAATTACTGGCCTCTCAGGCACAGGGGACATTATGCTTACATGCTTTGTCAACCTCTCCCGAAACAGAACAGTTGGAGTACGACTAGGATCTGGTGAGAATCTGGATGATATATTGAGCTCCATGAATCAGGTTGCAGAAGGTGTATCGACTGCTGGGGCTGTAATTGCTTTGGCTCAGAAGTATAAGGTGAAAATGCCAGTTTTGACAGCAGTGGCCCGAATTATTGATAATGAGCTAACACCACAAAAAGCAGTCCTTGAATTGATGGGGCTTCCTCAGGTGGAAGAGGTCTGA

Protein sequence

MGAKPTTITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGENLDDILSSMNQVAEGVSTAGAVIALAQKYKVKMPVLTAVARIIDNELTPQKAVLELMGLPQVEEV*

Homology

[Close]

BLAST of MELO3C020158 vs. Swiss-Prot
Match: GPDA2_ARATH (Glycerol-3-phosphate dehydrogenase [NAD(+)] 2, chloroplastic OS=Arabidopsis thaliana GN=GLY1 PE=1 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 1.2e-46
Identity = 95/104 (91.35%), Postives = 98/104 (94.23%), Query Frame = 1


Query: 1   MGAKPTTITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGENLDDILSSMNQVAEGVSTAGA 60
           MGAKPTTITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGE LDDIL+SMNQVAEGV+TAGA
Sbjct: 317 MGAKPTTITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGETLDDILTSMNQVAEGVATAGA 376

Query: 61  VIALAQKYKVKMPVLTAVARIIDNELTPQKAVLELMGLPQVEEV 105
           VIALAQKY VK+PVLTAVA+IIDNELTP KAVLELM LPQ+EEV
Sbjct: 377 VIALAQKYNVKLPVLTAVAKIIDNELTPTKAVLELMNLPQIEEV 420

[Close]

BLAST of MELO3C020158 vs. Swiss-Prot
Match: GPDA_ORYSJ (Glycerol-3-phosphate dehydrogenase [NAD(+)], chloroplastic OS=Oryza sativa subsp. japonica GN=Os07g0229800 PE=2 SV=3)

HSP 1 Score: 181.0 bits (458), Expect = 6.6e-45
Identity = 91/104 (87.50%), Postives = 98/104 (94.23%), Query Frame = 1


Query: 1   MGAKPTTITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGENLDDILSSMNQVAEGVSTAGA 60
           MGAKPTT++GLSG+GDIMLTCFVNLSRNR VG+RLGSGE LD+I++SMNQVAEGVSTAGA
Sbjct: 337 MGAKPTTLSGLSGSGDIMLTCFVNLSRNRNVGLRLGSGEKLDEIMNSMNQVAEGVSTAGA 396

Query: 61  VIALAQKYKVKMPVLTAVARIIDNELTPQKAVLELMGLPQVEEV 105
           VIALAQKY VKMPVLTAVARIIDNELTP+KAV+ELM LPQVEEV
Sbjct: 397 VIALAQKYHVKMPVLTAVARIIDNELTPKKAVMELMNLPQVEEV 440

[Close]

BLAST of MELO3C020158 vs. Swiss-Prot
Match: GPDA_LAWIP (Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=gpsA PE=3 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 9.6e-20
Identity = 48/96 (50.00%), Postives = 63/96 (65.62%), Query Frame = 1


Query: 1   MGAKPTTITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGENLDDILSSMNQVAEGVSTAGA 60
           +GA P T +GLSG GD+ LTC   LSRNR VG+RLG GE L +I +SMN +AEG+ T  A
Sbjct: 240 LGASPLTFSGLSGLGDLFLTCSGELSRNRQVGLRLGKGELLKNITNSMNMIAEGIKTTYA 299

Query: 61  VIALAQKYKVKMPVLTAVARIIDNELTPQKAVLELM 97
           V  LA K  V MP+  AV  +++  ++P +AV +L+
Sbjct: 300 VNTLASKLNVDMPITKAVYNVLEGVISPHEAVQKLL 335

[Close]

BLAST of MELO3C020158 vs. Swiss-Prot
Match: GPDA_SYNFM (Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=gpsA PE=3 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 6.2e-19
Identity = 47/96 (48.96%), Postives = 63/96 (65.62%), Query Frame = 1


Query: 1   MGAKPTTITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGENLDDILSSMNQVAEGVSTAGA 60
           MG+ P T  GL+G GD++LTC  +LSRNRTVG++LG G  + DIL+ M  VAEGV TA +
Sbjct: 233 MGSNPLTFLGLAGIGDLLLTCTGDLSRNRTVGIQLGQGRRIKDILAEMRMVAEGVKTAKS 292

Query: 61  VIALAQKYKVKMPVLTAVARIIDNELTPQKAVLELM 97
           +  LA++  V+MP+   V R+I  +  P+  V ELM
Sbjct: 293 IHFLARRIGVEMPICEQVYRVIYEDKDPRVVVRELM 328

[Close]

BLAST of MELO3C020158 vs. Swiss-Prot
Match: GPDA_DESMR (Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) GN=gpsA PE=3 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 8.1e-19
Identity = 52/96 (54.17%), Postives = 60/96 (62.50%), Query Frame = 1


Query: 1   MGAKPTTITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGENLDDILSSMNQVAEGVSTAGA 60
           MG    T  GLSG GD++LTC  +LSRNR VG+RL  G+ L DIL+ M  VAEGV TA A
Sbjct: 228 MGGDRQTFMGLSGMGDLVLTCTGDLSRNRQVGLRLAKGQKLLDILADMKMVAEGVKTAEA 287

Query: 61  VIALAQKYKVKMPVLTAVARIIDNELTPQKAVLELM 97
           V AL QK  V+MP+   V  I+  +  P KAV ELM
Sbjct: 288 VHALGQKLGVEMPITEQVYAILYKDKDPSKAVYELM 323

[Close]

BLAST of MELO3C020158 vs. TrEMBL
Match: A0A0A0KPB1_CUCSA (Glycerol-3-phosphate dehydrogenase [NAD(+)] OS=Cucumis sativus GN=Csa_5G223030 PE=3 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 9.0e-49
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 1


Query: 1   MGAKPTTITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGENLDDILSSMNQVAEGVSTAGA 60
           MGAKPTTITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGENLDDILSSMNQVAEGVSTAGA
Sbjct: 374 MGAKPTTITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGENLDDILSSMNQVAEGVSTAGA 433

Query: 61  VIALAQKYKVKMPVLTAVARIIDNELTPQKAVLELMGLPQVEEV 105
           VIALAQKYKVKMPVLTAVARIIDNELTPQKAVLELMGLPQVEEV
Sbjct: 434 VIALAQKYKVKMPVLTAVARIIDNELTPQKAVLELMGLPQVEEV 477

[Close]

BLAST of MELO3C020158 vs. TrEMBL
Match: B9I8E4_POPTR (Glycerol-3-phosphate dehydrogenase [NAD(+)] OS=Populus trichocarpa GN=POPTR_0013s09410g PE=3 SV=2)

HSP 1 Score: 191.0 bits (484), Expect = 7.1e-46
Identity = 99/104 (95.19%), Postives = 101/104 (97.12%), Query Frame = 1


Query: 1   MGAKPTTITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGENLDDILSSMNQVAEGVSTAGA 60
           MGAKP+TITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGE LDDILSSMNQVAEGVSTAGA
Sbjct: 352 MGAKPSTITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGEKLDDILSSMNQVAEGVSTAGA 411

Query: 61  VIALAQKYKVKMPVLTAVARIIDNELTPQKAVLELMGLPQVEEV 105
           VIALAQKY VKMPVLTAVARIIDNELTP+KAVLELM LPQVEEV
Sbjct: 412 VIALAQKYNVKMPVLTAVARIIDNELTPKKAVLELMNLPQVEEV 455

[Close]

BLAST of MELO3C020158 vs. TrEMBL
Match: A0A164YP57_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_018040 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 7.1e-46
Identity = 100/104 (96.15%), Postives = 100/104 (96.15%), Query Frame = 1


Query: 1   MGAKPTTITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGENLDDILSSMNQVAEGVSTAGA 60
           MGAK TTITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGE LDDILSSMNQVAEGVSTAGA
Sbjct: 421 MGAKSTTITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGERLDDILSSMNQVAEGVSTAGA 480

Query: 61  VIALAQKYKVKMPVLTAVARIIDNELTPQKAVLELMGLPQVEEV 105
           VIALAQKY VKMPVLTAVARIIDNELTPQKAVLELM LPQVEEV
Sbjct: 481 VIALAQKYNVKMPVLTAVARIIDNELTPQKAVLELMNLPQVEEV 524

[Close]

BLAST of MELO3C020158 vs. TrEMBL
Match: A0A067FVQ2_CITSI (Glycerol-3-phosphate dehydrogenase [NAD(+)] OS=Citrus sinensis GN=CISIN_1g012596mg PE=3 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 9.3e-46
Identity = 99/104 (95.19%), Postives = 100/104 (96.15%), Query Frame = 1


Query: 1   MGAKPTTITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGENLDDILSSMNQVAEGVSTAGA 60
           MGAKP TITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGE LDDILSSMNQVAEGVSTAGA
Sbjct: 357 MGAKPATITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGEKLDDILSSMNQVAEGVSTAGA 416

Query: 61  VIALAQKYKVKMPVLTAVARIIDNELTPQKAVLELMGLPQVEEV 105
           VIALAQKY VKMPVLTAVARIIDNELTP+KAVLELM LPQVEEV
Sbjct: 417 VIALAQKYNVKMPVLTAVARIIDNELTPKKAVLELMSLPQVEEV 460

[Close]

BLAST of MELO3C020158 vs. TrEMBL
Match: V4TC95_9ROSI (Glycerol-3-phosphate dehydrogenase [NAD(+)] OS=Citrus clementina GN=CICLE_v10031473mg PE=3 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 9.3e-46
Identity = 99/104 (95.19%), Postives = 100/104 (96.15%), Query Frame = 1


Query: 1   MGAKPTTITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGENLDDILSSMNQVAEGVSTAGA 60
           MGAKP TITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGE LDDILSSMNQVAEGVSTAGA
Sbjct: 357 MGAKPATITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGEKLDDILSSMNQVAEGVSTAGA 416

Query: 61  VIALAQKYKVKMPVLTAVARIIDNELTPQKAVLELMGLPQVEEV 105
           VIALAQKY VKMPVLTAVARIIDNELTP+KAVLELM LPQVEEV
Sbjct: 417 VIALAQKYNVKMPVLTAVARIIDNELTPKKAVLELMSLPQVEEV 460

[Close]

BLAST of MELO3C020158 vs. TAIR10
Match: AT2G40690.1 (AT2G40690.1 NAD-dependent glycerol-3-phosphate dehydrogenase family protein)

HSP 1 Score: 186.8 bits (473), Expect = 6.8e-48
Identity = 95/104 (91.35%), Postives = 98/104 (94.23%), Query Frame = 1


Query: 1   MGAKPTTITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGENLDDILSSMNQVAEGVSTAGA 60
           MGAKPTTITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGE LDDIL+SMNQVAEGV+TAGA
Sbjct: 317 MGAKPTTITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGETLDDILTSMNQVAEGVATAGA 376

Query: 61  VIALAQKYKVKMPVLTAVARIIDNELTPQKAVLELMGLPQVEEV 105
           VIALAQKY VK+PVLTAVA+IIDNELTP KAVLELM LPQ+EEV
Sbjct: 377 VIALAQKYNVKLPVLTAVAKIIDNELTPTKAVLELMNLPQIEEV 420

[Close]

BLAST of MELO3C020158 vs. NCBI nr
Match: gi|449457466|ref|XP_004146469.1| (PREDICTED: glycerol-3-phosphate dehydrogenase [NAD(+)])

HSP 1 Score: 200.7 bits (509), Expect = 1.3e-48
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 1


Query: 1   MGAKPTTITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGENLDDILSSMNQVAEGVSTAGA 60
           MGAKPTTITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGENLDDILSSMNQVAEGVSTAGA
Sbjct: 374 MGAKPTTITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGENLDDILSSMNQVAEGVSTAGA 433

Query: 61  VIALAQKYKVKMPVLTAVARIIDNELTPQKAVLELMGLPQVEEV 105
           VIALAQKYKVKMPVLTAVARIIDNELTPQKAVLELMGLPQVEEV
Sbjct: 434 VIALAQKYKVKMPVLTAVARIIDNELTPQKAVLELMGLPQVEEV 477

[Close]

BLAST of MELO3C020158 vs. NCBI nr
Match: gi|659114233|ref|XP_008456964.1| (PREDICTED: glycerol-3-phosphate dehydrogenase [NAD(+)])

HSP 1 Score: 200.7 bits (509), Expect = 1.3e-48
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 1


Query: 1   MGAKPTTITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGENLDDILSSMNQVAEGVSTAGA 60
           MGAKPTTITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGENLDDILSSMNQVAEGVSTAGA
Sbjct: 376 MGAKPTTITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGENLDDILSSMNQVAEGVSTAGA 435

Query: 61  VIALAQKYKVKMPVLTAVARIIDNELTPQKAVLELMGLPQVEEV 105
           VIALAQKYKVKMPVLTAVARIIDNELTPQKAVLELMGLPQVEEV
Sbjct: 436 VIALAQKYKVKMPVLTAVARIIDNELTPQKAVLELMGLPQVEEV 479

[Close]

BLAST of MELO3C020158 vs. NCBI nr
Match: gi|743941774|ref|XP_011015384.1| (PREDICTED: glycerol-3-phosphate dehydrogenase [NAD(+)])

HSP 1 Score: 191.0 bits (484), Expect = 1.0e-45
Identity = 99/104 (95.19%), Postives = 101/104 (97.12%), Query Frame = 1


Query: 1   MGAKPTTITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGENLDDILSSMNQVAEGVSTAGA 60
           MGAKP+TITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGE LDDILSSMNQVAEGVSTAGA
Sbjct: 341 MGAKPSTITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGEKLDDILSSMNQVAEGVSTAGA 400

Query: 61  VIALAQKYKVKMPVLTAVARIIDNELTPQKAVLELMGLPQVEEV 105
           VIALAQKY VKMPVLTAVARIIDNELTP+KAVLELM LPQVEEV
Sbjct: 401 VIALAQKYNVKMPVLTAVARIIDNELTPKKAVLELMSLPQVEEV 444

[Close]

BLAST of MELO3C020158 vs. NCBI nr
Match: gi|566200323|ref|XP_002319340.2| (hypothetical protein POPTR_0013s09410g [Populus trichocarpa])

HSP 1 Score: 191.0 bits (484), Expect = 1.0e-45
Identity = 99/104 (95.19%), Postives = 101/104 (97.12%), Query Frame = 1


Query: 1   MGAKPTTITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGENLDDILSSMNQVAEGVSTAGA 60
           MGAKP+TITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGE LDDILSSMNQVAEGVSTAGA
Sbjct: 352 MGAKPSTITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGEKLDDILSSMNQVAEGVSTAGA 411

Query: 61  VIALAQKYKVKMPVLTAVARIIDNELTPQKAVLELMGLPQVEEV 105
           VIALAQKY VKMPVLTAVARIIDNELTP+KAVLELM LPQVEEV
Sbjct: 412 VIALAQKYNVKMPVLTAVARIIDNELTPKKAVLELMNLPQVEEV 455

[Close]

BLAST of MELO3C020158 vs. NCBI nr
Match: gi|1021037015|gb|KZM94798.1| (hypothetical protein DCAR_018040 [Daucus carota subsp. sativus])

HSP 1 Score: 191.0 bits (484), Expect = 1.0e-45
Identity = 100/104 (96.15%), Postives = 100/104 (96.15%), Query Frame = 1


Query: 1   MGAKPTTITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGENLDDILSSMNQVAEGVSTAGA 60
           MGAK TTITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGE LDDILSSMNQVAEGVSTAGA
Sbjct: 421 MGAKSTTITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGERLDDILSSMNQVAEGVSTAGA 480

Query: 61  VIALAQKYKVKMPVLTAVARIIDNELTPQKAVLELMGLPQVEEV 105
           VIALAQKY VKMPVLTAVARIIDNELTPQKAVLELM LPQVEEV
Sbjct: 481 VIALAQKYNVKMPVLTAVARIIDNELTPQKAVLELMNLPQVEEV 524

The following BLAST results are available for this feature:

BLAST of MELO3C020158 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GPDA2_ARATH	1.2e-46	91.35	Glycerol-3-phosphate dehydrogenase [NAD(+)] 2, chloroplastic OS=Arabidopsis thal...	[more]
GPDA_ORYSJ	6.6e-45	87.50	Glycerol-3-phosphate dehydrogenase [NAD(+)], chloroplastic OS=Oryza sativa subsp...	[more]
GPDA_LAWIP	9.6e-20	50.00	Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Lawsonia intracellularis (strain...	[more]
GPDA_SYNFM	6.2e-19	48.96	Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Syntrophobacter fumaroxidans (st...	[more]
GPDA_DESMR	8.1e-19	54.17	Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Desulfovibrio magneticus (strain...	[more]

BLAST of MELO3C020158 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KPB1_CUCSA	9.0e-49	100.00	Glycerol-3-phosphate dehydrogenase [NAD(+)] OS=Cucumis sativus GN=Csa_5G223030 P...	[more]
B9I8E4_POPTR	7.1e-46	95.19	Glycerol-3-phosphate dehydrogenase [NAD(+)] OS=Populus trichocarpa GN=POPTR_0013...	[more]
A0A164YP57_DAUCA	7.1e-46	96.15	Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_018040 PE=4 SV=1	[more]
A0A067FVQ2_CITSI	9.3e-46	95.19	Glycerol-3-phosphate dehydrogenase [NAD(+)] OS=Citrus sinensis GN=CISIN_1g012596...	[more]
V4TC95_9ROSI	9.3e-46	95.19	Glycerol-3-phosphate dehydrogenase [NAD(+)] OS=Citrus clementina GN=CICLE_v10031...	[more]

BLAST of MELO3C020158 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G40690.1	6.8e-48	91.35	NAD-dependent glycerol-3-phosphate dehydrogenase family protein	[more]

BLAST of MELO3C020158 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449457466\|ref\|XP_004146469.1\|	1.3e-48	100.00	PREDICTED: glycerol-3-phosphate dehydrogenase [NAD(+)]	[more]
gi\|659114233\|ref\|XP_008456964.1\|	1.3e-48	100.00	PREDICTED: glycerol-3-phosphate dehydrogenase [NAD(+)]	[more]
gi\|743941774\|ref\|XP_011015384.1\|	1.0e-45	95.19	PREDICTED: glycerol-3-phosphate dehydrogenase [NAD(+)]	[more]
gi\|566200323\|ref\|XP_002319340.2\|	1.0e-45	95.19	hypothetical protein POPTR_0013s09410g [Populus trichocarpa]	[more]
gi\|1021037015\|gb\|KZM94798.1\|	1.0e-45	96.15	hypothetical protein DCAR_018040 [Daucus carota subsp. sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006109	G3P_DH_NAD-dep_C
IPR008927	6-PGluconate_DH-like_C_sf
IPR013328	6PGD_dom2

Vocabulary: **Molecular Function**
Term	Definition
GO:0004367	glycerol-3-phosphate dehydrogenase [NAD+] activity
GO:0016491	oxidoreductase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0005975	carbohydrate metabolic process
GO:0055114	oxidation-reduction process

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048653	anther development
biological_process	GO:0005975	carbohydrate metabolic process
biological_process	GO:0046168	glycerol-3-phosphate catabolic process
biological_process	GO:0045017	glycerolipid biosynthetic process
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0009627	systemic acquired resistance
biological_process	GO:0046486	glycerolipid metabolic process
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0009331	glycerol-3-phosphate dehydrogenase complex
molecular_function	GO:0004367	glycerol-3-phosphate dehydrogenase [NAD+] activity
molecular_function	GO:0051287	NAD binding
molecular_function	GO:0016491	oxidoreductase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C020158T1	MELO3C020158T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006109	Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal	PFAM	PF07479	NAD_Gly3P_dh_C	coord: 1..92 score: 1.7
IPR008927	6-phosphogluconate dehydrogenase C-terminal domain-like	unknown	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like	coord: 1..103 score: 4.42
IPR013328	6-phosphogluconate dehydrogenase, domain 2	GENE3D	G3DSA:1.10.1040.10		coord: 1..103 score: 2.3
None	No IPR available	PANTHER	PTHR11728	GLYCEROL-3-PHOSPHATE DEHYDROGENASE	coord: 1..104 score: 2.3
None	No IPR available	PANTHER	PTHR11728:SF13	GLYCEROL-3-PHOSPHATE DEHYDROGENASE [NAD(+)] 2, CHLOROPLASTIC	coord: 1..104 score: 2.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C020158	Cla007303	Watermelon (97103) v1	mewmB056
MELO3C020158	ClCG07G005190	Watermelon (Charleston Gray)	mewcgB069
MELO3C020158	Cla97C07G133550	Watermelon (97103) v2	mewmbB068
MELO3C020158	Bhi07G000409	Wax gourd	mewgoB073
MELO3C020158	CSPI05G11630	Wild cucumber (PI 183967)	cpimeB370
MELO3C020158	Cucsa.143860	Cucumber (Gy14) v1	cgymeB241
MELO3C020158	CmoCh04G000980	Cucurbita moschata (Rifu)	cmomeB634
MELO3C020158	Lsi04G010130	Bottle gourd (USVL1VR-Ls)	lsimeB282
MELO3C020158	Cp4.1LG01g05870	Cucurbita pepo (Zucchini)	cpemeB366
MELO3C020158	CsGy5G008890	Cucumber (Gy14) v2	cgybmeB320
MELO3C020158	Carg24468	Silver-seed gourd	carmeB0895
MELO3C020158	CsaV3_5G011040	Cucumber (Chinese Long) v3	cucmeB382

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C020158	Silver-seed gourd	carmeB0656
MELO3C020158	Cucurbita maxima (Rimu)	cmameB642
MELO3C020158	Cucurbita maxima (Rimu)	cmameB643
MELO3C020158	Cucurbita moschata (Rifu)	cmomeB633
MELO3C020158	Cucumber (Chinese Long) v2	cumeB369
MELO3C020158	Cucurbita pepo (Zucchini)	cpemeB365