MELO3C020149 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C020149
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionU-box protein
Locationchr10 : 9047813 .. 9050398 (+)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGATGCAATGATATTGCCGTGTGGGCATTCCTTTGGGAGTGGTGGAATACAACATGTTCTTAGAGTAGTGAGTTACTTGCAAGAATACTGCTCATCTATACTGTTATATTCTTTTTGTCACATTATCTATCATTTTTCTGATTGTCTTAAAAAATAAGCGGTGCATTGAAATTGTTTTGTCTTGCATTTTAATGCTTTGTACAGATTGCATAGCAAGCATTAAAACTTCAAATATACTGAAACTTTGCTGAGGTTCTTCAACATTTCAAATAATAGCTATTACAATTATTGTTGTTGTTTCAAGAGTACTAGATTTTACTATCAATCAAGCAGTTCTTGCTTTCTTGATCTTAAGAGCCCCTTTTCAAGTGATTTTTTTTCATTGAGACTTGCGAAAATAAGAGTTTGCAGAAATTTAGAATAAGAGACGATACCAATTTTGGTATAAAAATGAGTTTGCTACCCTTTTGCAGCAGCAATGCTTGAACTCTTAATCTTTTAACATGAAAATGGTCGACATCTAAAAGTTTAAACTCCATTTTTTGCACCACTGAACTTACGAACTTTTTTTTTCAGTGTACCATGATGTAAAACTTGGTGCGCTGTCTCTTGGCTGGGGGAAAGCAAGTAATTTGACTAGATAACCAGATTTTAGTCTTAGTGAGTTTGTCATGCATTTTCTTAATTAATTATTATAAGAATGCTCACTTTCTGTTGCAAGCATTTATTTTACCCAACTTGTGTGCACCTTAAGTTGCGTTGCTGTATGTTTGCTCCTGCTCCTGCTCTGTTGATATTGATCAGTCAAGTACTTTGATGACCTCAGTTTCACTGAGTTTCTGCATTTCTCTTGTTGTCTTTCCAGAAATCTTGTTACTCTTGCTCTCAGTCAGTTTCTGAAGACTCTATTGCCCAAAACTTATGTGAGTCGAAAATTTTCTCCACTTTTAATATTTAACATCTCTTTGTTACTGTTTCCAAAAATGCTTAATGATTTATACTGACGTTTAATTGTTCTCATGTTATGTTGTAACTGCTACTCGAAGTTAGGCAAAACATGTAAGAATTTTCATTGTTGTTAGTCGCTCTTTTCCGCCTTAAGTCTCACATTGTTGAGAGTTCCCAAACTAAACCCCCCAGAATAATGAAGTATAGATTTATATACTTTTCTTTGAAGATTATTTTTAAAACTGTATGAACTTTTCATGTCATGATATTTTCATCTTCAGCTCTTCAAGCTGCAGTCCGAGCATTCCGCCGTGAAGAAGAATTATTATTTTACCACTCACCGAAAAGGAGAAGGGAGAGGTTTGAGCAGGTAAGTGCTTTGTACCTCGGACCATATTATTGTAAGCCTGCTAATGTGAGATACTACAATCAAAGGAGGATGGAAATAGATTCCATGAGATTTTGGTTTTCCCTATCTCTCCAAGTCTTTCCTATCCATCCATGGCGATATTCAGTTCAATTATGTCATGTGCTACTCATGCATTTATTTTCATCACTCTTTTGCTTCAGAGTGACTGATATTCTCATGGTAGAACTGATTCTTGGTTTTCAATAATCGTTACTGTGTTTGCCAATGTAGGACAAGGGTGGTTATGGTGATTTGACTCTCATGGCCACTCAAAGAGGTCGAGGTGTTCAGTTTCCTTTTGCGGTGACAGATAGGGTAATTATTAAGGTGAGAGAACTGTACTCTTATTTAGCTCCTTATATTATATCATGGAGAAACTAATATTGCAGCTAAAATGGATCAGGGGAACAAGAGGACGCCGCAACGTTTTGTGGGACGTGAGGCTGTTGTTACAACACAGTGCTTGAATGGATGGTTTGTCATTTTCTGTTCTGATTCTCAATACTTTTGTTCTTATTCTGTCCATTACAAGAAGGAAGTAGCATGTTGTTTCCCATTAATCTTTTGTGTTTGATTTCTAATGATCGTTTTTGCCTATAGAAAGTGTTGGAAGCCATGTAAAATTAATGATAAAAGACTAAAATAGTCTTCTATGCTAAGTTTAGAGTGATGGCATAGCATTTGAATCTTAAGAACTAAAACATAGCATTTGAAGGTTTATAATTGCCAAAACTATAAAAATAAAATATAGCCATAACTTGTTATTTTTATCTTCAAAGATGTTTCAAAATTCAAGTCAAGTTTTTTAAAACTGAAGAAAGAACTTGAGATTAACGCTGTGTAGATAAGATAAGATAATGATGATTCTATCTTCCACCCTTTGAAAAGAAGAAATTTTGTTTTTTTAAATTTAGTTATGAAAGATGGACATCATTGTAAAACAAGGGGAGTAAGCAAACACAATTTTAAAAATAAAAAAACTAAATGGTTATGAAAGAGGGTCTTAATGACCAAAATAAGATTTAAAGGTCTTTTGTGCATACCTCAATCTAATAAAGACTTAGTTTACAACAATGCATCCACTTCTCTTACCACGGCAGGTATGTGGTGAAAACGCTAGACAATGCAGAGAGTGTAAAGTTGCAGTACCGCTCACTTGCAAAGGTTCCAAATGATGCAAGATCAAAGACGATAACAAGGAAGGTCACGCCAAATTGGCTTTAG

mRNA sequence

ATGGATGATGCAATGATATTGCCGTGTGGGCATTCCTTTGGGAGTGGTGGAATACAACATGTTCTTAGAGTAAAATCTTGTTACTCTTGCTCTCAGTCAGTTTCTGAAGACTCTATTGCCCAAAACTTATCTCTTCAAGCTGCAGTCCGAGCATTCCGCCGTGAAGAAGAATTATTATTTTACCACTCACCGAAAAGGAGAAGGGAGAGGTTTGAGCAGGACAAGGGTGGTTATGGTGATTTGACTCTCATGGCCACTCAAAGAGGTCGAGGTGTTCAGTTTCCTTTTGCGGTGACAGATAGGGTAATTATTAAGGGGAACAAGAGGACGCCGCAACGTTTTGTGGGACGTGAGGCTGTTGTTACAACACAGTGCTTGAATGGATGGTATGTGGTGAAAACGCTAGACAATGCAGAGAGTGTAAAGTTGCAGTACCGCTCACTTGCAAAGGTTCCAAATGATGCAAGATCAAAGACGATAACAAGGAAGGTCACGCCAAATTGGCTTTAG

Coding sequence (CDS)

ATGGATGATGCAATGATATTGCCGTGTGGGCATTCCTTTGGGAGTGGTGGAATACAACATGTTCTTAGAGTAAAATCTTGTTACTCTTGCTCTCAGTCAGTTTCTGAAGACTCTATTGCCCAAAACTTATCTCTTCAAGCTGCAGTCCGAGCATTCCGCCGTGAAGAAGAATTATTATTTTACCACTCACCGAAAAGGAGAAGGGAGAGGTTTGAGCAGGACAAGGGTGGTTATGGTGATTTGACTCTCATGGCCACTCAAAGAGGTCGAGGTGTTCAGTTTCCTTTTGCGGTGACAGATAGGGTAATTATTAAGGGGAACAAGAGGACGCCGCAACGTTTTGTGGGACGTGAGGCTGTTGTTACAACACAGTGCTTGAATGGATGGTATGTGGTGAAAACGCTAGACAATGCAGAGAGTGTAAAGTTGCAGTACCGCTCACTTGCAAAGGTTCCAAATGATGCAAGATCAAAGACGATAACAAGGAAGGTCACGCCAAATTGGCTTTAG

Protein sequence

MDDAMILPCGHSFGSGGIQHVLRVKSCYSCSQSVSEDSIAQNLSLQAAVRAFRREEELLFYHSPKRRRERFEQDKGGYGDLTLMATQRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAVVTTQCLNGWYVVKTLDNAESVKLQYRSLAKVPNDARSKTITRKVTPNWL*
Homology
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BLAST of MELO3C020149 vs. Swiss-Prot
Match: PUB62_ARATH (U-box domain-containing protein 62 OS=Arabidopsis thaliana GN=PUB62 PE=2 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 3.5e-56
Identity = 108/169 (63.91%), Postives = 124/169 (73.37%), Query Frame = 1 

Query: 1   MDDAMILPCGHSFGSGGIQHVLRVKSCYSCSQSVSEDSIAQNLSLQAAVRAFRREEELLF 60
           M DAMILPCGH+FG+GGI+ V ++K+C +CSQ VSEDSI  NL+L+ AV+AF REE    
Sbjct: 195 MADAMILPCGHTFGAGGIEQVKQMKACCTCSQPVSEDSITPNLTLRVAVQAFCREENSQS 254

Query: 61  YHSPKRRRERFEQDKGGYGDLTLMATQRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAV 120
            H  KR+RE F+Q++  +G        R +   FPFAV DRVIIKGNKRTP RFVGREAV
Sbjct: 255 NHPSKRKREGFDQERRAFGVTNHSGRSRNKSNHFPFAVADRVIIKGNKRTPPRFVGREAV 314

Query: 121 VTTQCLNGWYVVKTLDNAESVKLQYRSLAKVPNDARSKTITRKVTPNWL 170
           VTTQCLNGWYVVKTLDNAESVKLQYRSLAK P D  +K    K+  NWL
Sbjct: 315 VTTQCLNGWYVVKTLDNAESVKLQYRSLAKAPEDPSAKATPNKMVSNWL 363

[Close]
BLAST of MELO3C020149 vs. Swiss-Prot
Match: PUB63_ARATH (U-box domain-containing protein 63 OS=Arabidopsis thaliana GN=PUB63 PE=2 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 2.0e-46
Identity = 88/169 (52.07%), Postives = 121/169 (71.60%), Query Frame = 1 

Query: 1   MDDAMILPCGHSFGSGGIQHVLRVKSCYSCSQSVSEDSIAQNLSLQAAVRAFRREEELLF 60
           M+DA ILPCGHSFG+GG++ V ++K+C++CSQ   E S   NLSL+  V AFR+EE+   
Sbjct: 215 MNDATILPCGHSFGAGGLKEVKKMKACFTCSQPTLEGSEKPNLSLRIVVHAFRQEEDSDH 274

Query: 61  YHSPKRRRERFEQDKGGYGDLTLMATQRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAV 120
            H+ KRR+ER +Q +           +  RG+QFPF++ D +II+GNKRTP RFVGR AV
Sbjct: 275 IHTLKRRKERSDQKRSFCIPNITETPKSSRGIQFPFSIGDHIIIEGNKRTPPRFVGRIAV 334

Query: 121 VTTQCLNGWYVVKTLDNAESVKLQYRSLAKVPNDARSKTITRKVTPNWL 170
           + TQCLNGWYVVKT+DN+ES+KLQ+ SLAK+ +++ +K    ++ P+WL
Sbjct: 335 IMTQCLNGWYVVKTVDNSESIKLQHCSLAKISDNSSTKVTVAEMPPSWL 383

[Close]
BLAST of MELO3C020149 vs. TrEMBL
Match: A0A0A0KQN9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G222470 PE=4 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 3.9e-86
Identity = 160/169 (94.67%), Postives = 164/169 (97.04%), Query Frame = 1 

Query: 1   MDDAMILPCGHSFGSGGIQHVLRVKSCYSCSQSVSEDSIAQNLSLQAAVRAFRREEELLF 60
           MDDAMILPCGHSFGSGGIQHVLR+KSCYSCSQSVSEDSIAQNLSLQAAV+AFRREEELLF
Sbjct: 257 MDDAMILPCGHSFGSGGIQHVLRLKSCYSCSQSVSEDSIAQNLSLQAAVQAFRREEELLF 316

Query: 61  YHSPKRRRERFEQDKGGYGDLTLMATQRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAV 120
           YHSPKRRRERFEQ+KGGYGDLTLM TQRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAV
Sbjct: 317 YHSPKRRRERFEQEKGGYGDLTLMDTQRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAV 376

Query: 121 VTTQCLNGWYVVKTLDNAESVKLQYRSLAKVPNDARSKTITRKVTPNWL 170
           VTTQCLNGWYVVKTLDNAESVKLQYRSLAKV NDA SK ITRK+ PNWL
Sbjct: 377 VTTQCLNGWYVVKTLDNAESVKLQYRSLAKVQNDATSKMITRKMMPNWL 425

[Close]
BLAST of MELO3C020149 vs. TrEMBL
Match: A0A0A0LIQ7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G852550 PE=4 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 1.9e-85
Identity = 158/169 (93.49%), Postives = 165/169 (97.63%), Query Frame = 1 

Query: 1   MDDAMILPCGHSFGSGGIQHVLRVKSCYSCSQSVSEDSIAQNLSLQAAVRAFRREEELLF 60
           M+DAMILPCGHSFGSGGIQHVL+V+SCYSCSQSVSEDSIAQNLSLQAAV+AF REEELLF
Sbjct: 261 MNDAMILPCGHSFGSGGIQHVLKVRSCYSCSQSVSEDSIAQNLSLQAAVQAFCREEELLF 320

Query: 61  YHSPKRRRERFEQDKGGYGDLTLMATQRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAV 120
           + SPKRRRERFEQDKGGYGDLTLM TQRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAV
Sbjct: 321 HRSPKRRRERFEQDKGGYGDLTLMDTQRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAV 380

Query: 121 VTTQCLNGWYVVKTLDNAESVKLQYRSLAKVPNDARSKTITRKVTPNWL 170
           VTTQCLNGWYVVKTLDNAESVKLQYRSLAKVPNDA +KTITRK+TPNWL
Sbjct: 381 VTTQCLNGWYVVKTLDNAESVKLQYRSLAKVPNDATTKTITRKITPNWL 429

[Close]
BLAST of MELO3C020149 vs. TrEMBL
Match: B9IQ60_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s08650g PE=4 SV=2)

HSP 1 Score: 287.7 bits (735), Expect = 9.0e-75
Identity = 139/169 (82.25%), Postives = 153/169 (90.53%), Query Frame = 1 

Query: 1   MDDAMILPCGHSFGSGGIQHVLRVKSCYSCSQSVSEDSIAQNLSLQAAVRAFRREEELLF 60
           MDDAMILPCGHSFG+GG+QHV+R+K CYSCSQS+SEDSIA NLSL+ AV+AF+REEEL F
Sbjct: 278 MDDAMILPCGHSFGAGGMQHVIRMKVCYSCSQSISEDSIAPNLSLRYAVQAFQREEELQF 337

Query: 61  YHSPKRRRERFEQDKGGYGDLTLMATQRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAV 120
           Y S KRRRERF+QDKGGYGD  +M   RGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAV
Sbjct: 338 YRSSKRRRERFDQDKGGYGDSGVMDPPRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAV 397

Query: 121 VTTQCLNGWYVVKTLDNAESVKLQYRSLAKVPNDARSKTITRKVTPNWL 170
           VTTQCLNGWYVVKTLDNAESVKLQYRSLAK+ +D  SKTI+ K+ PNWL
Sbjct: 398 VTTQCLNGWYVVKTLDNAESVKLQYRSLAKLSDDPSSKTISTKIAPNWL 446

[Close]
BLAST of MELO3C020149 vs. TrEMBL
Match: A0A061FSM8_THECC (RING/U-box superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_045494 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 1.3e-73
Identity = 137/169 (81.07%), Postives = 150/169 (88.76%), Query Frame = 1 

Query: 1   MDDAMILPCGHSFGSGGIQHVLRVKSCYSCSQSVSEDSIAQNLSLQAAVRAFRREEELLF 60
           MDDAMILPCGHSFG+ GIQHVLR+K CY+CS SVSE+S+A NLSL+AAV+AFRREEEL F
Sbjct: 288 MDDAMILPCGHSFGAAGIQHVLRLKVCYTCSHSVSEESVAPNLSLRAAVQAFRREEELQF 347

Query: 61  YHSPKRRRERFEQDKGGYGDLTLMATQRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAV 120
           Y SPKRRR+RF+QDK  YGD  +M   RGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAV
Sbjct: 348 YRSPKRRRDRFDQDKSNYGDSNMMDPPRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAV 407

Query: 121 VTTQCLNGWYVVKTLDNAESVKLQYRSLAKVPNDARSKTITRKVTPNWL 170
           VTTQCLNGWYVVKTLDNAESVKLQYRSLAKVP+D  SK +  K+ PNWL
Sbjct: 408 VTTQCLNGWYVVKTLDNAESVKLQYRSLAKVPDDPSSKPMASKMGPNWL 456

[Close]
BLAST of MELO3C020149 vs. TrEMBL
Match: B9S4G2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0690100 PE=4 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 8.5e-73
Identity = 134/169 (79.29%), Postives = 149/169 (88.17%), Query Frame = 1 

Query: 1   MDDAMILPCGHSFGSGGIQHVLRVKSCYSCSQSVSEDSIAQNLSLQAAVRAFRREEELLF 60
           MDDAMILPCGHSFG GGIQH++R K+CY+CSQS +EDS+A NLSL+AAV+AFRREEEL F
Sbjct: 226 MDDAMILPCGHSFGVGGIQHIIRTKACYTCSQSTTEDSVAPNLSLRAAVQAFRREEELQF 285

Query: 61  YHSPKRRRERFEQDKGGYGDLTLMATQRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAV 120
           Y S KR+RERF+QDKGG+GD T M   RGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAV
Sbjct: 286 YRSSKRKRERFDQDKGGFGDSTAMDAPRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAV 345

Query: 121 VTTQCLNGWYVVKTLDNAESVKLQYRSLAKVPNDARSKTITRKVTPNWL 170
           VTTQCLNGWYVVKTLDNAESVKLQYRSLAKV +    K ++ K+ PNWL
Sbjct: 346 VTTQCLNGWYVVKTLDNAESVKLQYRSLAKVSDAPSGKALSSKIPPNWL 394

[Close]
BLAST of MELO3C020149 vs. TAIR10
Match: AT5G05230.1 (AT5G05230.1 RING/U-box superfamily protein)

HSP 1 Score: 219.2 bits (557), Expect = 2.0e-57
Identity = 108/169 (63.91%), Postives = 124/169 (73.37%), Query Frame = 1 

Query: 1   MDDAMILPCGHSFGSGGIQHVLRVKSCYSCSQSVSEDSIAQNLSLQAAVRAFRREEELLF 60
           M DAMILPCGH+FG+GGI+ V ++K+C +CSQ VSEDSI  NL+L+ AV+AF REE    
Sbjct: 195 MADAMILPCGHTFGAGGIEQVKQMKACCTCSQPVSEDSITPNLTLRVAVQAFCREENSQS 254

Query: 61  YHSPKRRRERFEQDKGGYGDLTLMATQRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAV 120
            H  KR+RE F+Q++  +G        R +   FPFAV DRVIIKGNKRTP RFVGREAV
Sbjct: 255 NHPSKRKREGFDQERRAFGVTNHSGRSRNKSNHFPFAVADRVIIKGNKRTPPRFVGREAV 314

Query: 121 VTTQCLNGWYVVKTLDNAESVKLQYRSLAKVPNDARSKTITRKVTPNWL 170
           VTTQCLNGWYVVKTLDNAESVKLQYRSLAK P D  +K    K+  NWL
Sbjct: 315 VTTQCLNGWYVVKTLDNAESVKLQYRSLAKAPEDPSAKATPNKMVSNWL 363

[Close]
BLAST of MELO3C020149 vs. TAIR10
Match: AT2G40640.1 (AT2G40640.1 RING/U-box superfamily protein)

HSP 1 Score: 186.8 bits (473), Expect = 1.1e-47
Identity = 88/169 (52.07%), Postives = 121/169 (71.60%), Query Frame = 1 

Query: 1   MDDAMILPCGHSFGSGGIQHVLRVKSCYSCSQSVSEDSIAQNLSLQAAVRAFRREEELLF 60
           M+DA ILPCGHSFG+GG++ V ++K+C++CSQ   E S   NLSL+  V AFR+EE+   
Sbjct: 215 MNDATILPCGHSFGAGGLKEVKKMKACFTCSQPTLEGSEKPNLSLRIVVHAFRQEEDSDH 274

Query: 61  YHSPKRRRERFEQDKGGYGDLTLMATQRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAV 120
            H+ KRR+ER +Q +           +  RG+QFPF++ D +II+GNKRTP RFVGR AV
Sbjct: 275 IHTLKRRKERSDQKRSFCIPNITETPKSSRGIQFPFSIGDHIIIEGNKRTPPRFVGRIAV 334

Query: 121 VTTQCLNGWYVVKTLDNAESVKLQYRSLAKVPNDARSKTITRKVTPNWL 170
           + TQCLNGWYVVKT+DN+ES+KLQ+ SLAK+ +++ +K    ++ P+WL
Sbjct: 335 IMTQCLNGWYVVKTVDNSESIKLQHCSLAKISDNSSTKVTVAEMPPSWL 383

[Close]
BLAST of MELO3C020149 vs. TAIR10
Match: AT3G19895.1 (AT3G19895.1 RING/U-box superfamily protein)

HSP 1 Score: 141.0 bits (354), Expect = 6.9e-34
Identity = 67/158 (42.41%), Postives = 104/158 (65.82%), Query Frame = 1 

Query: 1   MDDAMILPCGHSFGSGGIQHVLRVKSCYSCSQSVSEDSIAQNLSLQAAVRAFRREEELLF 60
           ++DAM++ CGHSFG   ++ VL +  C  C+  +   S+  N +L+AA  A +++++   
Sbjct: 383 LEDAMVVSCGHSFGGLMLRRVLEMSRCTLCNTEIESGSLVPNHALRAAASAIKQQDDKRL 442

Query: 61  YHSPKRRRERFEQDKGGYGDLTLMATQRG--RGVQFPFAVTDRVIIKGNKRTPQRFVGRE 120
           +H+   RR R E       +    AT  G  R V +PFAV ++V+IKGN+RTP++FVG+E
Sbjct: 443 FHNAAMRRRRKEMSDQMDVENGDPATDDGMHRVVHYPFAVNEKVLIKGNRRTPEKFVGKE 502

Query: 121 AVVTTQCLNGWYVVKTLDNAESVKLQYRSLAKVPNDAR 157
           A+VT+QCLNGWY++K +++ ++V+LQYRSL K+ ND R
Sbjct: 503 AIVTSQCLNGWYLLKIVESGDNVRLQYRSLKKMVNDDR 540

[Close]
BLAST of MELO3C020149 vs. NCBI nr
Match: gi|659114215|ref|XP_008456955.1| (PREDICTED: U-box domain-containing protein 62-like isoform X1 [Cucumis melo])

HSP 1 Score: 343.2 bits (879), Expect = 2.6e-91
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 1 

Query: 1   MDDAMILPCGHSFGSGGIQHVLRVKSCYSCSQSVSEDSIAQNLSLQAAVRAFRREEELLF 60
           MDDAMILPCGHSFGSGGIQHVLRVKSCYSCSQSVSEDSIAQNLSLQAAVRAFRREEELLF
Sbjct: 261 MDDAMILPCGHSFGSGGIQHVLRVKSCYSCSQSVSEDSIAQNLSLQAAVRAFRREEELLF 320

Query: 61  YHSPKRRRERFEQDKGGYGDLTLMATQRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAV 120
           YHSPKRRRERFEQDKGGYGDLTLMATQRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAV
Sbjct: 321 YHSPKRRRERFEQDKGGYGDLTLMATQRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAV 380

Query: 121 VTTQCLNGWYVVKTLDNAESVKLQYRSLAKVPNDARSKTITRKVTPNWL 170
           VTTQCLNGWYVVKTLDNAESVKLQYRSLAKVPNDARSKTITRKVTPNWL
Sbjct: 381 VTTQCLNGWYVVKTLDNAESVKLQYRSLAKVPNDARSKTITRKVTPNWL 429

[Close]
BLAST of MELO3C020149 vs. NCBI nr
Match: gi|659114217|ref|XP_008456956.1| (PREDICTED: U-box domain-containing protein 62-like isoform X2 [Cucumis melo])

HSP 1 Score: 343.2 bits (879), Expect = 2.6e-91
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 1 

Query: 1   MDDAMILPCGHSFGSGGIQHVLRVKSCYSCSQSVSEDSIAQNLSLQAAVRAFRREEELLF 60
           MDDAMILPCGHSFGSGGIQHVLRVKSCYSCSQSVSEDSIAQNLSLQAAVRAFRREEELLF
Sbjct: 256 MDDAMILPCGHSFGSGGIQHVLRVKSCYSCSQSVSEDSIAQNLSLQAAVRAFRREEELLF 315

Query: 61  YHSPKRRRERFEQDKGGYGDLTLMATQRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAV 120
           YHSPKRRRERFEQDKGGYGDLTLMATQRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAV
Sbjct: 316 YHSPKRRRERFEQDKGGYGDLTLMATQRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAV 375

Query: 121 VTTQCLNGWYVVKTLDNAESVKLQYRSLAKVPNDARSKTITRKVTPNWL 170
           VTTQCLNGWYVVKTLDNAESVKLQYRSLAKVPNDARSKTITRKVTPNWL
Sbjct: 376 VTTQCLNGWYVVKTLDNAESVKLQYRSLAKVPNDARSKTITRKVTPNWL 424

[Close]
BLAST of MELO3C020149 vs. NCBI nr
Match: gi|778701562|ref|XP_004146472.2| (PREDICTED: U-box domain-containing protein 62 [Cucumis sativus])

HSP 1 Score: 325.5 bits (833), Expect = 5.6e-86
Identity = 160/169 (94.67%), Postives = 164/169 (97.04%), Query Frame = 1 

Query: 1   MDDAMILPCGHSFGSGGIQHVLRVKSCYSCSQSVSEDSIAQNLSLQAAVRAFRREEELLF 60
           MDDAMILPCGHSFGSGGIQHVLR+KSCYSCSQSVSEDSIAQNLSLQAAV+AFRREEELLF
Sbjct: 257 MDDAMILPCGHSFGSGGIQHVLRLKSCYSCSQSVSEDSIAQNLSLQAAVQAFRREEELLF 316

Query: 61  YHSPKRRRERFEQDKGGYGDLTLMATQRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAV 120
           YHSPKRRRERFEQ+KGGYGDLTLM TQRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAV
Sbjct: 317 YHSPKRRRERFEQEKGGYGDLTLMDTQRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAV 376

Query: 121 VTTQCLNGWYVVKTLDNAESVKLQYRSLAKVPNDARSKTITRKVTPNWL 170
           VTTQCLNGWYVVKTLDNAESVKLQYRSLAKV NDA SK ITRK+ PNWL
Sbjct: 377 VTTQCLNGWYVVKTLDNAESVKLQYRSLAKVQNDATSKMITRKMMPNWL 425

[Close]
BLAST of MELO3C020149 vs. NCBI nr
Match: gi|778686447|ref|XP_004147826.2| (PREDICTED: U-box domain-containing protein 62-like [Cucumis sativus])

HSP 1 Score: 323.2 bits (827), Expect = 2.8e-85
Identity = 158/169 (93.49%), Postives = 165/169 (97.63%), Query Frame = 1 

Query: 1   MDDAMILPCGHSFGSGGIQHVLRVKSCYSCSQSVSEDSIAQNLSLQAAVRAFRREEELLF 60
           M+DAMILPCGHSFGSGGIQHVL+V+SCYSCSQSVSEDSIAQNLSLQAAV+AF REEELLF
Sbjct: 261 MNDAMILPCGHSFGSGGIQHVLKVRSCYSCSQSVSEDSIAQNLSLQAAVQAFCREEELLF 320

Query: 61  YHSPKRRRERFEQDKGGYGDLTLMATQRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAV 120
           + SPKRRRERFEQDKGGYGDLTLM TQRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAV
Sbjct: 321 HRSPKRRRERFEQDKGGYGDLTLMDTQRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAV 380

Query: 121 VTTQCLNGWYVVKTLDNAESVKLQYRSLAKVPNDARSKTITRKVTPNWL 170
           VTTQCLNGWYVVKTLDNAESVKLQYRSLAKVPNDA +KTITRK+TPNWL
Sbjct: 381 VTTQCLNGWYVVKTLDNAESVKLQYRSLAKVPNDATTKTITRKITPNWL 429

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BLAST of MELO3C020149 vs. NCBI nr
Match: gi|659109361|ref|XP_008454674.1| (PREDICTED: U-box domain-containing protein 62-like [Cucumis melo])

HSP 1 Score: 318.2 bits (814), Expect = 9.0e-84
Identity = 156/169 (92.31%), Postives = 163/169 (96.45%), Query Frame = 1 

Query: 1   MDDAMILPCGHSFGSGGIQHVLRVKSCYSCSQSVSEDSIAQNLSLQAAVRAFRREEELLF 60
           M+DAMILPCGHSFGSGGIQHVLRV+SCYSCSQSVSEDS+AQNLSLQAAV+AF REEELLF
Sbjct: 261 MNDAMILPCGHSFGSGGIQHVLRVRSCYSCSQSVSEDSVAQNLSLQAAVQAFCREEELLF 320

Query: 61  YHSPKRRRERFEQDKGGYGDLTLMATQRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAV 120
           + SPKRRRERFEQDK GYGDLTLM TQRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAV
Sbjct: 321 HRSPKRRRERFEQDKCGYGDLTLMDTQRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAV 380

Query: 121 VTTQCLNGWYVVKTLDNAESVKLQYRSLAKVPNDARSKTITRKVTPNWL 170
           VTTQCLNGWYVVKTLDNAESVKLQYRSLAKVPNDA +K ITRK+TPNWL
Sbjct: 381 VTTQCLNGWYVVKTLDNAESVKLQYRSLAKVPNDATTKMITRKITPNWL 429

The following BLAST results are available for this feature:
BLAST of MELO3C020149 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PUB62_ARATH3.5e-5663.91U-box domain-containing protein 62 OS=Arabidopsis thaliana GN=PUB62 PE=2 SV=1[more]
PUB63_ARATH2.0e-4652.07U-box domain-containing protein 63 OS=Arabidopsis thaliana GN=PUB63 PE=2 SV=1[more]
BLAST of MELO3C020149 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KQN9_CUCSA3.9e-8694.67Uncharacterized protein OS=Cucumis sativus GN=Csa_5G222470 PE=4 SV=1[more]
A0A0A0LIQ7_CUCSA1.9e-8593.49Uncharacterized protein OS=Cucumis sativus GN=Csa_3G852550 PE=4 SV=1[more]
B9IQ60_POPTR9.0e-7582.25Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s08650g PE=4 SV=2[more]
A0A061FSM8_THECC1.3e-7381.07RING/U-box superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_045494 PE=4 S... [more]
B9S4G2_RICCO8.5e-7379.29Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0690100 PE=4 SV=1[more]
BLAST of MELO3C020149 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G05230.12.0e-5763.91 RING/U-box superfamily protein[more]
AT2G40640.11.1e-4752.07 RING/U-box superfamily protein[more]
AT3G19895.16.9e-3442.41 RING/U-box superfamily protein[more]
BLAST of MELO3C020149 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659114215|ref|XP_008456955.1|2.6e-91100.00PREDICTED: U-box domain-containing protein 62-like isoform X1 [Cucumis melo][more]
gi|659114217|ref|XP_008456956.1|2.6e-91100.00PREDICTED: U-box domain-containing protein 62-like isoform X2 [Cucumis melo][more]
gi|778701562|ref|XP_004146472.2|5.6e-8694.67PREDICTED: U-box domain-containing protein 62 [Cucumis sativus][more]
gi|778686447|ref|XP_004147826.2|2.8e-8593.49PREDICTED: U-box domain-containing protein 62-like [Cucumis sativus][more]
gi|659109361|ref|XP_008454674.1|9.0e-8492.31PREDICTED: U-box domain-containing protein 62-like [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016567 protein ubiquitination
cellular_component GO:0005575 cellular_component
molecular_function GO:0016874 ligase activity
molecular_function GO:0004842 ubiquitin-protein transferase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C020149T1MELO3C020149T1mRNA


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 2..53
score: 2.
NoneNo IPR availablePANTHERPTHR33644FAMILY NOT NAMEDcoord: 1..169
score: 3.4E
NoneNo IPR availablePANTHERPTHR33644:SF3U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATEDcoord: 1..169
score: 3.4E
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 1..56
score: 4.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C020149Csa5G222470Cucumber (Chinese Long) v2cumeB369
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C020149Cucumber (Chinese Long) v3cucmeB382
MELO3C020149Watermelon (97103) v2mewmbB068
MELO3C020149Wax gourdmewgoB073
MELO3C020149Cucumber (Gy14) v1cgymeB241
MELO3C020149Cucurbita maxima (Rimu)cmameB642
MELO3C020149Cucurbita maxima (Rimu)cmameB643
MELO3C020149Cucurbita moschata (Rifu)cmomeB633
MELO3C020149Cucurbita moschata (Rifu)cmomeB634
MELO3C020149Wild cucumber (PI 183967)cpimeB370
MELO3C020149Watermelon (Charleston Gray)mewcgB069
MELO3C020149Watermelon (97103) v1mewmB056
MELO3C020149Cucurbita pepo (Zucchini)cpemeB365
MELO3C020149Cucurbita pepo (Zucchini)cpemeB366
MELO3C020149Bottle gourd (USVL1VR-Ls)lsimeB282
MELO3C020149Cucumber (Gy14) v2cgybmeB320
MELO3C020149Silver-seed gourdcarmeB0656
MELO3C020149Silver-seed gourdcarmeB0895