MELO3C020060 (gene) Melon (DHL92) v3.5.1

NameMELO3C020060
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionZinc transporter
Locationchr10 : 11263732 .. 11263953 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTCAAATCTCATGGTGGCTACCTATCTAATCAATGGTTTCTTAAAGAAAAACAAAACCTATCAGGCAAAGTGTTCTTCCTTGATGAAAAAGTTACAGTTGGTCCTATGCATAAGACTTCTTTGTCTTTTACCAATCATGATTGAGATTACATTATTTCATATATCTAGATTTTAGTTTGTGTGGTAATGTTATTAAAATCTTTGTCCTAAGAGAGAAAAAGATGATTTAAAATTTATCTTATTAGATGTTATGTAAAAATGCATCAAAAGTAATAAGAACTTTGTGTTAGTCGATGTCATCTTCTACATTCCTGGTATTATAGATTTGGCTGATCCTCTTTTAAAAATGAAATATAGGCGTAAAAGATTTTGTAACTACAATACTGCATTGGTGTTGCAGCTGGAATCGTGCTTTTTCTTCTGGTAGAGAAGATAGTGAGGTATGTAGAAGATAATTCTGAGGGAGGAAATGATTGGAGTCATGGTCACCACCACCACCATAAGAATAAAAAATTGAAGGATGATAGTGATTCTCCTGACACCACTGATAAAAAGGGCAGAGCTAAGTTGTTGGATGGAGTGCCAAATGACTCAAAAGAAGATCAGGGTACTCCACAGAAATCCGTTCCCCGGAAGGTAAGCTGTTCAATTTTTGGTACTAGATTTTGTGTGACATTAAAAAATCATCAACTTGTGATTGTTCTTTTTAAGGAACAAACTGGCCGCGTGTTCTGTAGTTATCTCATAGACATTGAAGCTGTTGTTTTCTTTAAAAGAGCCATATTATCATTTCCTTTTCTATTAAAAATTACAATTTTGAGGTTTCAACTCCATACTTAGATTTTAACCAAAAAATCAGAGAACACCTGTTACACATTATTTCATACTTTCCAGTGAGAATAAAGAAGCTCTTATTACCATCAATATTCCAACCATTTTTGGCAGATGAACCTCCTTTTTATATTTTCATTTCTTTTTAAGGAGCCCATTTTTTCAGATTTGTATGGTTTCAGCTATTGTGCTTGCAAGATTTTCATATCAATTTTAGTTGACATCAATTAAGACAATATTTACTTCCCATGTCTACATGAGCTAGGGAGATTTCATTGTTCATTAATTGTGGAATGTTACTATGCTTAGTTTAAAAAAAATTTTTAAATGTTACTGCATAGACATTTGGTTAAACTACTAATTATATGGACTACACTAGACGAAAATACAGGAGTGTTTGATATATCTTCTCTGACTTGCTAGATTTATGCAGAGAAATGGGAAATCTGCCTCCAGAGATGATAAGGAAGATCTAGTTGCTGCTAATGGCCTCACTGCTGATGTCAATTCCTCACAAGAATTTCCAGCTAAGACACCGTCAAACTTAGTGTTTGGTTATCTCAATCTATTCTCTGATGGCGTTGTAAGTTTCTCCCATTACCTAAATTCTTCCAATCTTCAATTTCCATTTTAGTTTTTCGGTTTAAGAATGATTGAACTTCAATATAGTTCTCTGCTAGGAAACTTTTGATGTTTGTTTGAGGGTTTTTGTTGGCGTTGCAGCACAATTTCACCGATGGGATGGCCTTAGGAAGTGCTTTCTTACTATATGGATCTGTTGGTGGATGGTCTAGAACTGTGTTTTTGCTTGCGCATGAACTCCCGCAAGAGGTTCATCTTCTTTCTTGACTATCATTATTGGACTATCAGACATTTCATTCAATCAGTTCGATAGCTGAAAATTATAATACCCTCTGGCCAAATCATCAAATCAACCCATGCTCCCTTATGCTTTTAAGTTAACATTACATATACATGACTAGATTGTCTTCTCTATTTTCCAATTTTTTGTAACAAAGGTGCCTGTCTTCAGCCCTGGAAGTTACTTTTTTTCTTATCTCAGTTTTGAGAATGTTTGCTACTTGAAATGACGGATTTTAGATTTTATATTTATTTTCCATTCCTTTTCCTGTCCCTGAACATACTAATGATTAGTAGAGTCTCATAATCGGGAAGCTACCCTTACAGTAGCTCCATCATGTACTTCATACTAATCATTCTGTTGGGTGATGGTAAATCTCCCCAAGAAAAATTTGCAAAATTTGAAGTTATACATGTGTCCATGAATCTTATTGTAGTGGTTTAGATAAATCGTCTACTTGTTTATGCCTATTTTTTATTTTATTTTTTGAATGGAGGTATGGATGAAAACTAAGACTCTGCTATATACTTACTCCAATTGAACTACAGTACCTGGTTGAACTATCTGCTTCTATCTCATGAGGCTTATTAGTAAATTATATAACTATGCAATGAACTGTCCCACTAGTCACCAGTCACAAGTGCTGCTTTGCATAGTAATCAGCATTATTAGTCTTCAATTAAAGAACCAAACAGCATGGAGATTGCAGGCCCATGATTTGTGAACTCGAGTTCCTCTTCTGTCAGTATTTTCTTAAGAGACATGTCATCTTCTTTACATTGTTTCATTGCTCGTTTAATGTGTTTATTTAGATTTTAATTGTTTGATTTGGGTACAGATTGGGGATTTTGGTATTTTGGTAAGATCCGGTTTCAGTGTTGCCAAAGCTCTTTTCTTCAACTTCCTCTCTGCACTCGTGGCTCTTGCCGGAACTGCAATTGTAAGTACCATTTTGTACGCACATCTTAAACTTTCCACGAACATGAATACATAATTTAATTATCATTCTTCTACGACTTCCGTAGGCATTGCTAATGGGGACAGATCCGGGACACTCATCGTTGATTGAGGTGAGAAATAACTGCAGAAACTCTTTTGGTCATTTAGAACTGATTCTTATCAAGACAATTTGAACATCCTCAGGGGTTTACCGCGGGTGGTTTCATATACATCGCGGTTGCTGGAGTACTAGCTGAAATGAACAGTAGCAGCAAATCAACTATAAGAACAACTGTATTTCAATTAACTTCACTTGTACTCGGAATGGCTGTCGCGCTTGGGATTTCCCTCATTGAATGA

mRNA sequence

ATGGGTTCAAATCTCATGGTGGCTACCTATCTAATCAATGCTGGAATCGTGCTTTTTCTTCTGGTAGAGAAGATAGTGAGGTATGTAGAAGATAATTCTGAGGGAGGAAATGATTGGAGTCATGGTCACCACCACCACCATAAGAATAAAAAATTGAAGGATGATAGTGATTCTCCTGACACCACTGATAAAAAGGGCAGAGCTAAGTTGTTGGATGGAGTGCCAAATGACTCAAAAGAAGATCAGGGTACTCCACAGAAATCCGTTCCCCGGAAGAGAAATGGGAAATCTGCCTCCAGAGATGATAAGGAAGATCTAGTTGCTGCTAATGGCCTCACTGCTGATGTCAATTCCTCACAAGAATTTCCAGCTAAGACACCGTCAAACTTAGTGTTTGGTTATCTCAATCTATTCTCTGATGGCGTTCACAATTTCACCGATGGGATGGCCTTAGGAAGTGCTTTCTTACTATATGGATCTGTTGGTGGATGGTCTAGAACTGTGTTTTTGCTTGCGCATGAACTCCCGCAAGAGATTGGGGATTTTGGTATTTTGGTAAGATCCGGTTTCAGTGTTGCCAAAGCTCTTTTCTTCAACTTCCTCTCTGCACTCGTGGCTCTTGCCGGAACTGCAATTGCATTGCTAATGGGGACAGATCCGGGACACTCATCGTTGATTGAGGGGTTTACCGCGGGTGGTTTCATATACATCGCGGTTGCTGGAGTACTAGCTGAAATGAACAGTAGCAGCAAATCAACTATAAGAACAACTGTATTTCAATTAACTTCACTTGTACTCGGAATGGCTGTCGCGCTTGGGATTTCCCTCATTGAATGA

Coding sequence (CDS)

ATGGGTTCAAATCTCATGGTGGCTACCTATCTAATCAATGCTGGAATCGTGCTTTTTCTTCTGGTAGAGAAGATAGTGAGGTATGTAGAAGATAATTCTGAGGGAGGAAATGATTGGAGTCATGGTCACCACCACCACCATAAGAATAAAAAATTGAAGGATGATAGTGATTCTCCTGACACCACTGATAAAAAGGGCAGAGCTAAGTTGTTGGATGGAGTGCCAAATGACTCAAAAGAAGATCAGGGTACTCCACAGAAATCCGTTCCCCGGAAGAGAAATGGGAAATCTGCCTCCAGAGATGATAAGGAAGATCTAGTTGCTGCTAATGGCCTCACTGCTGATGTCAATTCCTCACAAGAATTTCCAGCTAAGACACCGTCAAACTTAGTGTTTGGTTATCTCAATCTATTCTCTGATGGCGTTCACAATTTCACCGATGGGATGGCCTTAGGAAGTGCTTTCTTACTATATGGATCTGTTGGTGGATGGTCTAGAACTGTGTTTTTGCTTGCGCATGAACTCCCGCAAGAGATTGGGGATTTTGGTATTTTGGTAAGATCCGGTTTCAGTGTTGCCAAAGCTCTTTTCTTCAACTTCCTCTCTGCACTCGTGGCTCTTGCCGGAACTGCAATTGCATTGCTAATGGGGACAGATCCGGGACACTCATCGTTGATTGAGGGGTTTACCGCGGGTGGTTTCATATACATCGCGGTTGCTGGAGTACTAGCTGAAATGAACAGTAGCAGCAAATCAACTATAAGAACAACTGTATTTCAATTAACTTCACTTGTACTCGGAATGGCTGTCGCGCTTGGGATTTCCCTCATTGAATGA

Protein sequence

MGSNLMVATYLINAGIVLFLLVEKIVRYVEDNSEGGNDWSHGHHHHHKNKKLKDDSDSPDTTDKKGRAKLLDGVPNDSKEDQGTPQKSVPRKRNGKSASRDDKEDLVAANGLTADVNSSQEFPAKTPSNLVFGYLNLFSDGVHNFTDGMALGSAFLLYGSVGGWSRTVFLLAHELPQEIGDFGILVRSGFSVAKALFFNFLSALVALAGTAIALLMGTDPGHSSLIEGFTAGGFIYIAVAGVLAEMNSSSKSTIRTTVFQLTSLVLGMAVALGISLIE*
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003689ZIP
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0030001metal ion transport
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0046873metal ion transmembrane transporter activity
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030001 metal ion transport
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016020 membrane
molecular_function GO:0046873 metal ion transmembrane transporter activity
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU46953melon EST collection version 4.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C020060T2MELO3C020060T2mRNA
MELO3C020060T1MELO3C020060T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU46953MU46953transcribed_cluster


Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003689Zinc/iron permeasePFAMPF02535Zipcoord: 10..274
score: 1.8
NoneNo IPR availablePANTHERPTHR16950ZINC TRANSPORTER SLC39A7 HISTIDINE-RICH MEMBRANE PROTEIN KE4coord: 14..278
score: 4.6E
NoneNo IPR availablePANTHERPTHR16950:SF16ZINC TRANSPORTER ZIP13coord: 14..278
score: 4.6E

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None