MELO3C020051 (gene) Melon (DHL92) v3.5.1

NameMELO3C020051
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionEukaryotic translation initiation factor 5A
Locationchr10 : 11502064 .. 11502812 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGACGACGGTGCAGCTATTCCTCTCCAAAATGATGACGATGAAGGAGCTCTGCCTTTGCCTGTCTAAGATGATGATGTGCAACTCCACCTCTGCTCTCTCTAAAGGTGACGACGACGAGGAAGCTTTGCCTCCACCTTTCTAAAAATGATGATGATAGTGCAACTTTGCTTCCGCCTCCCCAAAGATGACGTCGATAATGCAACTTTGCCTCCGTCTCTCTAAGATGACAATGATGGTGCAGCTCTGCCTCTCAAAGATGATGAGATGTGCAACTTCACTTTCACCTCCCCAAAGATGACGTAGACAATGCAGCTCCGCCTTCGTCTCTCTAAGATGACGATGATGCAGCTTTACCTCTGTCTCTCCAAAATGACGACGATGGTACAACTTTGCCTCCGCCTCTCCAATATGACGATGACAATGCATCTTTGCTTCCGCCTCTCCAAGATGATGATGATAGTGCAACTTTACCTTCGTTTCACTCTCTTCAAGATGACGAAGATGGTGCAACTTCACCTCTGCTCTTTCTAAGATAACGACGATGGTACAGCTTTGTCTCCGCCTCTCCAAGATGATGACGATGGTGCAGCTTTACCTCTGCCTCTCCAAAATGAAGATGGCGTAGTTCCGCTTCTTCAGAACGATGGCAAAATGAAGATGCCCAATCGTCCTACTAAGGCGGTGGATCTGAAGGTAAATGTCGATCGTTCCCTAGTAGAAGTTGGATCGCCGACGGCGAAGTAG

mRNA sequence

ATGACGACGACGGTGCAGCTATTCCTCTCCAAAATGATGACGATGAAGGAGCTCTGCCTTTGCCTGTCTAAGATGATGATGTGCAACTCCACCTCTGCTCTCTCTAAAGCTTTACCTCTGTCTCTCCAAAATGACGACGATGGTACAACTTTGCCTCCGCCTCTCCAATATGACGATGACAATGCATCTTTGCTTCCGCCTCTCCAAGATGATGATGATAGTGCAACTTTACCTTCGTTTCACTCTCTTCAAGATGACGAAGATGCTTTGTCTCCGCCTCTCCAAGATGATGACGATGGTGCAGCTTTACCTCTGCCTCTCCAAAATGAAGATGGCGTAGTTCCGCTTCTTCAGAACGATGGCAAAATGAAGATGCCCAATCGTCCTACTAAGGCGGTGGATCTGAAGGTAAATGTCGATCGTTCCCTAGTAGAAGTTGGATCGCCGACGGCGAAGTAG

Coding sequence (CDS)

ATGACGACGACGGTGCAGCTATTCCTCTCCAAAATGATGACGATGAAGGAGCTCTGCCTTTGCCTGTCTAAGATGATGATGTGCAACTCCACCTCTGCTCTCTCTAAAGCTTTACCTCTGTCTCTCCAAAATGACGACGATGGTACAACTTTGCCTCCGCCTCTCCAATATGACGATGACAATGCATCTTTGCTTCCGCCTCTCCAAGATGATGATGATAGTGCAACTTTACCTTCGTTTCACTCTCTTCAAGATGACGAAGATGCTTTGTCTCCGCCTCTCCAAGATGATGACGATGGTGCAGCTTTACCTCTGCCTCTCCAAAATGAAGATGGCGTAGTTCCGCTTCTTCAGAACGATGGCAAAATGAAGATGCCCAATCGTCCTACTAAGGCGGTGGATCTGAAGGTAAATGTCGATCGTTCCCTAGTAGAAGTTGGATCGCCGACGGCGAAGTAG

Protein sequence

MTTTVQLFLSKMMTMKELCLCLSKMMMCNSTSALSKALPLSLQNDDDGTTLPPPLQYDDDNASLLPPLQDDDDSATLPSFHSLQDDEDALSPPLQDDDDGAALPLPLQNEDGVVPLLQNDGKMKMPNRPTKAVDLKVNVDRSLVEVGSPTAK*
BLAST of MELO3C020051 vs. NCBI nr
Match: gi|659114278|ref|XP_008456987.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g09650, chloroplastic-like [Cucumis melo])

HSP 1 Score: 209.5 bits (532), Expect = 4.0e-51
Identity = 101/103 (98.06%), Postives = 102/103 (99.03%), Query Frame = 1

Query: 34  LSKALPLSLQNDDDGTTLPPPLQYDDDNASLLPPLQDDDDSATLPSFHSLQDDEDALSPP 93
           L +ALPLSLQNDDDGTTLPPPLQYDDDNASLLPPLQDDDDSATLPSFHSLQDDEDALSPP
Sbjct: 67  LFEALPLSLQNDDDGTTLPPPLQYDDDNASLLPPLQDDDDSATLPSFHSLQDDEDALSPP 126

Query: 94  LQDDDDGAALPLPLQNEDGVVPLLQNDGKMKMPNRPTKAVDLK 137
           LQDDDDGAALPLPLQNEDGVVPLLQNDGKMKMPNRPTKAVDLK
Sbjct: 127 LQDDDDGAALPLPLQNEDGVVPLLQNDGKMKMPNRPTKAVDLK 169

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
gi|659114278|ref|XP_008456987.1|4.0e-5198.06PREDICTED: pentatricopeptide repeat-containing protein At3g09650, chloroplastic-... [more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C020051T1MELO3C020051T1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None