MELO3C019689.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C019689.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionProtodermal factor 1
Locationchr11 : 24282222 .. 24283798 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAAATTTCAGAGGCATGCATGTGATTTCACCTCCCTCCCCAATGAATTCATCCCTGGAAAATCTCAACATTATTTCAAACAATTAAAAGCAGCAAGCAATATGAATAAATGCACCAATAAAACAGCAACTAACCACATACTCTTCCACCTGTAAGAAGTAACTTCACTTTCCCTCAACCCCCCTTCTATATATTCCCCCATTTGTCCTAAACATTCCATCCATCACCATTACCATTCCTTCCCTTCTTTCCCATCTCTAATCCCTTTGCTCCCAATCAGAAAAACAGCCAACCAAAGAAACAACCATGAGAAGCAAACAAGCTTCTGCTCTCCTTTTCACTTTGCTTGCTGGGCTGCTTTCTCAAAGCCTACTCATCCCTGTATTGTCCACCTCCATTACTGATCAGAAAAGCTACTACTCTCCTCCAGACCCACATTCTGGATCTCCTCCATCAGGTTATTGCACATTCACAATGAATCTCACACATTCAGTATCAGTACAGTAGTAATGGTAGTGATTAGTAGGCTTACAGCATTATATGTTTACTTTGCATTGCAGGTTCACATGGCAGTCCTATCCCACCATCACATGGTAATGGAGGAACGCCACATTACTCCACACCAACACCTTCCACACCGTCTGGTGGCGGTGGATACTACAACCCTCCGTCTTCTGGTGGTAGCCCACCAAGCACCCCTGTAGATCCAGGCACTCCTAGCACTCCAAGCACTCCTAGTGTTCCTAGCACACCAAGCACGCCTACCATTCCCACTACTCCATTTACCTGCAAGTAAGTCAAGGGTTTATAGTAACTGTTTTCCATGGAGAAGAGAACATATTTGTTTATAAAAATGTGTTTGCTACTTTGTTTGCAGTTATTGGCTGAATCATCCAGGATTGATATGGGGAGTATTGGGATGGTGGGGAACATTAGGAAATGCCTTCGGAGCAACCAATGTCCCAGGGTTTGGAACAAATCTCAACTTGCTCCAAGCACTTTCTAACACAAGGAATGATGGGTATGGGGCCCTTCTCAGAGAAGGAACTGCTTCGTACCTCAACTCTCTTGCTAGTAACAGATTCCCCTACACAACCAAGCAAGTTAGGACAAGTTTCGTCTCAGCACTCAGCTCCAACAAAGCAGCAGGCGATCAGGCCAACACGTTCAAGTTAGCCAACGAGGGCAAAATTAAACCCAGAGCTTGATTTCCCCACTTTTTCCTACCATTTACCATCTAAATAACTAATGAGTGTGCCTTAGCAGTTAGTAGTGAGACAGTGAGACCAATTTACCATTGCATGTGTTGTTTTGTTTTATTTTGTTCTTGTTTCTAGTTTCTTGCAATCTCTTTTGTTCATGTATTTGAACATAGAGATGCTCAGTCTTTGTTATCCAAATTCATTGTGAAATCAAGATTGTTTCAAGAGTTAATTTGTTTAATCAGATTATCCAAAAGGGGGTTGAAAATTAAAAGTTCAGATGCTTGTTATCTACACTAATCTATTGTTTCTATCACTATGCTTTAAAAGGGTAGTAAAATCCATGAAGTGTTTGTATTTATGGCGCATTAATGA

mRNA sequence

CAAAATTTCAGAGGCATGCATGTGATTTCACCTCCCTCCCCAATGAATTCATCCCTGGAAAATCTCAACATTATTTCAAACAATTAAAAGCAGCAAGCAATATGAATAAATGCACCAATAAAACAGCAACTAACCACATACTCTTCCACCTGTAAGAAGTAACTTCACTTTCCCTCAACCCCCCTTCTATATATTCCCCCATTTGTCCTAAACATTCCATCCATCACCATTACCATTCCTTCCCTTCTTTCCCATCTCTAATCCCTTTGCTCCCAATCAGAAAAACAGCCAACCAAAGAAACAACCATGAGAAGCAAACAAGCTTCTGCTCTCCTTTTCACTTTGCTTGCTGGGCTGCTTTCTCAAAGCCTACTCATCCCTGTATTGTCCACCTCCATTACTGATCAGAAAAGCTACTACTCTCCTCCAGACCCACATTCTGGATCTCCTCCATCAGGTTCACATGGCAGTCCTATCCCACCATCACATGGTAATGGAGGAACGCCACATTACTCCACACCAACACCTTCCACACCGTCTGGTGGCGGTGGATACTACAACCCTCCGTCTTCTGGTGGTAGCCCACCAAGCACCCCTGTAGATCCAGGCACTCCTAGCACTCCAAGCACTCCTAGTGTTCCTAGCACACCAAGCACGCCTACCATTCCCACTACTCCATTTACCTGCAATTATTGGCTGAATCATCCAGGATTGATATGGGGAGTATTGGGATGGTGGGGAACATTAGGAAATGCCTTCGGAGCAACCAATGTCCCAGGGTTTGGAACAAATCTCAACTTGCTCCAAGCACTTTCTAACACAAGGAATGATGGGTATGGGGCCCTTCTCAGAGAAGGAACTGCTTCGTACCTCAACTCTCTTGCTAGTAACAGATTCCCCTACACAACCAAGCAAGTTAGGACAAGTTTCGTCTCAGCACTCAGCTCCAACAAAGCAGCAGGCGATCAGGCCAACACGTTCAAGTTAGCCAACGAGGGCAAAATTAAACCCAGAGCTTGATTTCCCCACTTTTTCCTACCATTTACCATCTAAATAACTAATGAGTGTGCCTTAGCAGTTAGTAGTGAGACAGTGAGACCAATTTACCATTGCATGTGTTGTTTTGTTTTATTTTGTTCTTGTTTCTAGTTTCTTGCAATCTCTTTTGTTCATGTATTTGAACATAGAGATGCTCAGTCTTTGTTATCCAAATTCATTGTGAAATCAAGATTGTTTCAAGAGTTAATTTGTTTAATCAGATTATCCAAAAGGGGGTTGAAAATTAAAAGTTCAGATGCTTGTTATCTACACTAATCTATTGTTTCTATCACTATGCTTTAAAAGGGTAGTAAAATCCATGAAGTGTTTGTATTTATGGCGCATTAATGA

Coding sequence (CDS)

ATGAGAAGCAAACAAGCTTCTGCTCTCCTTTTCACTTTGCTTGCTGGGCTGCTTTCTCAAAGCCTACTCATCCCTGTATTGTCCACCTCCATTACTGATCAGAAAAGCTACTACTCTCCTCCAGACCCACATTCTGGATCTCCTCCATCAGGTTCACATGGCAGTCCTATCCCACCATCACATGGTAATGGAGGAACGCCACATTACTCCACACCAACACCTTCCACACCGTCTGGTGGCGGTGGATACTACAACCCTCCGTCTTCTGGTGGTAGCCCACCAAGCACCCCTGTAGATCCAGGCACTCCTAGCACTCCAAGCACTCCTAGTGTTCCTAGCACACCAAGCACGCCTACCATTCCCACTACTCCATTTACCTGCAATTATTGGCTGAATCATCCAGGATTGATATGGGGAGTATTGGGATGGTGGGGAACATTAGGAAATGCCTTCGGAGCAACCAATGTCCCAGGGTTTGGAACAAATCTCAACTTGCTCCAAGCACTTTCTAACACAAGGAATGATGGGTATGGGGCCCTTCTCAGAGAAGGAACTGCTTCGTACCTCAACTCTCTTGCTAGTAACAGATTCCCCTACACAACCAAGCAAGTTAGGACAAGTTTCGTCTCAGCACTCAGCTCCAACAAAGCAGCAGGCGATCAGGCCAACACGTTCAAGTTAGCCAACGAGGGCAAAATTAAACCCAGAGCTTGA

Protein sequence

MRSKQASALLFTLLAGLLSQSLLIPVLSTSITDQKSYYSPPDPHSGSPPSGSHGSPIPPSHGNGGTPHYSTPTPSTPSGGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSVPSTPSTPTIPTTPFTCNYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRNDGYGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGDQANTFKLANEGKIKPRA
Homology
[Close]
BLAST of MELO3C019689.2 vs. NCBI nr
Match: XP_008456355.1 (PREDICTED: protodermal factor 1-like [Cucumis melo])

HSP 1 Score: 296.6 bits (758), Expect = 7.6e-77
Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0 

Query: 1   MRSKQASALLFTLLAGLLSQSLLIPVLSTSITDQKSYYSPPDPHSGXXXXXXXXXXXXXX 60
           MRSKQASALLFTLLAGLLSQSLLIPVLSTSITDQKSYYSPPDPHSGXXXXXXXXXXXXXX
Sbjct: 1   MRSKQASALLFTLLAGLLSQSLLIPVLSTSITDQKSYYSPPDPHSGXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXSTPTPSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           XXXXXXXXXSTPTPSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  XXXXXXXXXSTPTPSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXCNYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRNDGYGAL 180
           XXXXXXCNYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRNDGYGAL
Sbjct: 121 XXXXXXCNYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRNDGYGAL 180

Query: 181 LREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGDQANTFKLANEGKIKPRA 238
           LREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGDQANTFKLANEGKIKPRA
Sbjct: 181 LREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGDQANTFKLANEGKIKPRA 237

[Close]
BLAST of MELO3C019689.2 vs. NCBI nr
Match: XP_004143175.1 (PREDICTED: protodermal factor 1 [Cucumis sativus] >KGN47037.1 hypothetical protein Csa_6G178950 [Cucumis sativus])

HSP 1 Score: 265.0 bits (676), Expect = 2.4e-67
Identity = 224/241 (92.95%), Postives = 226/241 (93.78%), Query Frame = 0 

Query: 1   MRSKQASALLFTLLAGLLSQSLLIPVLSTSITDQKSYYSPPDPHSG----XXXXXXXXXX 60
           MRSKQ SAL+FTLLAGLLSQSLLIPVLSTSI DQKSYYSPPDPHSG    XXXXXXXXXX
Sbjct: 1   MRSKQVSALVFTLLAGLLSQSLLIPVLSTSIADQKSYYSPPDPHSGSXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXSTPTPSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           XXXXXXXXXXXXX       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXCNYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRNDG 180
           XXXXXXXXX C YWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRNDG
Sbjct: 121 XXXXXXXXXTCTYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRNDG 180

Query: 181 YGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGDQANTFKLANEGKIKPR 238
           YGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAG+QANTFKLANEGKIKPR
Sbjct: 181 YGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGNQANTFKLANEGKIKPR 240

[Close]
BLAST of MELO3C019689.2 vs. NCBI nr
Match: XP_022149747.1 (protodermal factor 1-like [Momordica charantia])

HSP 1 Score: 238.8 bits (608), Expect = 1.9e-59
Identity = 181/237 (76.37%), Postives = 192/237 (81.01%), Query Frame = 0 

Query: 1   MRSKQASALLFTLLAGLLSQSLLIPVLSTSITDQKSYYSPPDPHSGXXXXXXXXXXXXXX 60
           MRSKQASALLFTLLAGLLS SL+IPV S++I DQKSYYS PDPH+G              
Sbjct: 1   MRSKQASALLFTLLAGLLSHSLVIPVFSSTIADQKSYYS-PDPHAG---TPPTGTHNNPM 60

Query: 61  XXXXXXXXXSTPTPSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
                XXXX       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  XXXXXXXXXX  
Sbjct: 61  PPPHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDXXXXXXXXXXPP 120

Query: 121 XXXXXXCNYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRNDGYGAL 180
                 CNYWLNHPG+IWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTR DG+GA+
Sbjct: 121 APFTGTCNYWLNHPGMIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRTDGFGAI 180

Query: 181 LREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGDQANTFKLANEGKIKPRA 238
           LREGTASYLNSLA+N FP+TTKQVR+SFVSALSSNKAA DQA  FKLANEGK+KPRA
Sbjct: 181 LREGTASYLNSLANNSFPFTTKQVRSSFVSALSSNKAAADQAKVFKLANEGKLKPRA 233

[Close]
BLAST of MELO3C019689.2 vs. NCBI nr
Match: XP_022947015.1 (protodermal factor 1-like [Cucurbita moschata])

HSP 1 Score: 236.9 bits (603), Expect = 7.1e-59
Identity = 206/247 (83.40%), Postives = 217/247 (87.85%), Query Frame = 0 

Query: 1   MRSKQASALLFTLLAGLLSQSLLIPVLSTSITDQKSYYSPPDPHSG-------------X 60
           MR+KQAS LLFTLLAGLLSQSLLIPVLST+I DQKSYYSPPDPH+G             X
Sbjct: 1   MRTKQASPLLFTLLAGLLSQSLLIPVLSTTIADQKSYYSPPDPHAGTPPTGSHSNPIPXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXSTPTPSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           XXXXXXXXXXXXXXXXXXXXXX       XXXX    XXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSTXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXCNYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQ 180
           XXXXXXXXXXXXXXXXXXXCN+WLNHPG+IWGVLGWWGTLGN FGATNVPGFGTNLNLLQ
Sbjct: 121 XXXXXXXXXXXXXXXXXXXCNFWLNHPGMIWGVLGWWGTLGNCFGATNVPGFGTNLNLLQ 180

Query: 181 ALSNTRNDGYGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGDQANTFKL 235
           ALSNTR DG+GALLREGTASYLNSLASNRFP+TTKQV++SFVSAL+SN+AA DQAN FKL
Sbjct: 181 ALSNTRADGFGALLREGTASYLNSLASNRFPFTTKQVQSSFVSALNSNRAAADQANIFKL 240

[Close]
BLAST of MELO3C019689.2 vs. NCBI nr
Match: XP_022970795.1 (protodermal factor 1-like [Cucurbita maxima])

HSP 1 Score: 235.3 bits (599), Expect = 2.1e-58
Identity = 205/251 (81.67%), Postives = 216/251 (86.06%), Query Frame = 0 

Query: 1   MRSKQASALLFTLLAGLLSQSLLIPVLSTSITDQKSYYSPPDPHSG-------------- 60
           MR+KQAS LLFTLLAGLLSQSLLIPVLST+I DQKSYYSPPDPH+G              
Sbjct: 1   MRTKQASPLLFTLLAGLLSQSLLIPVLSTTIADQKSYYSPPDPHAGTPPTGSHSNPIXXX 60

Query: 61  ---XXXXXXXXXXXXXXXXXXXXXXXSTPTPSTXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
              XXXXXXXXXXXXXXXXXXXXXXX            XXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGGSTXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXCNYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNL 180
           XXXXXXXXXXXXXXXXXXXXXXXCN+WLNHPG+IWGVLGWWGTLGN FGATNVPGFGTNL
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXCNFWLNHPGMIWGVLGWWGTLGNCFGATNVPGFGTNL 180

Query: 181 NLLQALSNTRNDGYGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGDQAN 235
           NLLQALSNTR DG+GALLREGTASYLNSLASNRFP+TTKQV++SFVSAL+SN+AA DQAN
Sbjct: 181 NLLQALSNTRADGFGALLREGTASYLNSLASNRFPFTTKQVQSSFVSALNSNRAAADQAN 240

[Close]
BLAST of MELO3C019689.2 vs. TAIR10
Match: AT2G42840.1 (protodermal factor 1)

HSP 1 Score: 156.4 bits (394), Expect = 2.2e-38
Identity = 75/114 (65.79%), Postives = 94/114 (82.46%), Query Frame = 0 

Query: 127 CNYWLNHPGLIWGVLGWWGTLGNAFGA----TNVPGFGTNLNLLQALSNTRNDGYGALLR 186
           C+YW NHP LIWG+LGWWGT+G AFG     +++PGF  ++NLLQALSNTR+D  GAL R
Sbjct: 192 CDYWRNHPTLIWGLLGWWGTVGGAFGTVSIPSSIPGFDPHMNLLQALSNTRSDPIGALYR 251

Query: 187 EGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGDQANTFKLANEGKIKPR 237
           EGTAS+LNS+ +++FP+TT QVR  FV+ LSSNKAA  QA+TFKLANEG++KPR
Sbjct: 252 EGTASWLNSMVNHKFPFTTPQVRDHFVAGLSSNKAATKQAHTFKLANEGRLKPR 305

[Close]
BLAST of MELO3C019689.2 vs. TAIR10
Match: AT2G20515.1 (unknown protein)

HSP 1 Score: 46.2 bits (108), Expect = 3.2e-05
Identity = 26/71 (36.62%), Postives = 42/71 (59.15%), Query Frame = 0 

Query: 161 TNLNLLQALSNTRNDG--YGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAA 220
           ++L L+++ +    +G  YGALL++G A+ +NS A   F Y   +V+T  + A+ S  AA
Sbjct: 81  SDLTLVESTARNDEEGNAYGALLKQGIAALINSYARKSFSYAPWEVKTMLIQAMVSESAA 140

Query: 221 GDQANTFKLAN 230
             QA  F +AN
Sbjct: 141 RRQAEHFAVAN 151

[Close]
BLAST of MELO3C019689.2 vs. Swiss-Prot
Match: sp|Q9S728|PDF1_ARATH (Protodermal factor 1 OS=Arabidopsis thaliana OX=3702 GN=PDF1 PE=2 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 4.0e-37
Identity = 75/114 (65.79%), Postives = 94/114 (82.46%), Query Frame = 0 

Query: 127 CNYWLNHPGLIWGVLGWWGTLGNAFGA----TNVPGFGTNLNLLQALSNTRNDGYGALLR 186
           C+YW NHP LIWG+LGWWGT+G AFG     +++PGF  ++NLLQALSNTR+D  GAL R
Sbjct: 192 CDYWRNHPTLIWGLLGWWGTVGGAFGTVSIPSSIPGFDPHMNLLQALSNTRSDPIGALYR 251

Query: 187 EGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGDQANTFKLANEGKIKPR 237
           EGTAS+LNS+ +++FP+TT QVR  FV+ LSSNKAA  QA+TFKLANEG++KPR
Sbjct: 252 EGTASWLNSMVNHKFPFTTPQVRDHFVAGLSSNKAATKQAHTFKLANEGRLKPR 305

[Close]
BLAST of MELO3C019689.2 vs. TrEMBL
Match: tr|A0A1S3C4A9|A0A1S3C4A9_CUCME (protodermal factor 1-like OS=Cucumis melo OX=3656 GN=LOC103496321 PE=4 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 5.0e-77
Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0 

Query: 1   MRSKQASALLFTLLAGLLSQSLLIPVLSTSITDQKSYYSPPDPHSGXXXXXXXXXXXXXX 60
           MRSKQASALLFTLLAGLLSQSLLIPVLSTSITDQKSYYSPPDPHSGXXXXXXXXXXXXXX
Sbjct: 1   MRSKQASALLFTLLAGLLSQSLLIPVLSTSITDQKSYYSPPDPHSGXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXSTPTPSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           XXXXXXXXXSTPTPSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  XXXXXXXXXSTPTPSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXCNYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRNDGYGAL 180
           XXXXXXCNYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRNDGYGAL
Sbjct: 121 XXXXXXCNYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRNDGYGAL 180

Query: 181 LREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGDQANTFKLANEGKIKPRA 238
           LREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGDQANTFKLANEGKIKPRA
Sbjct: 181 LREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGDQANTFKLANEGKIKPRA 237

[Close]
BLAST of MELO3C019689.2 vs. TrEMBL
Match: tr|A0A0A0KF76|A0A0A0KF76_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G178950 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 1.6e-67
Identity = 224/241 (92.95%), Postives = 226/241 (93.78%), Query Frame = 0 

Query: 1   MRSKQASALLFTLLAGLLSQSLLIPVLSTSITDQKSYYSPPDPHSG----XXXXXXXXXX 60
           MRSKQ SAL+FTLLAGLLSQSLLIPVLSTSI DQKSYYSPPDPHSG    XXXXXXXXXX
Sbjct: 1   MRSKQVSALVFTLLAGLLSQSLLIPVLSTSIADQKSYYSPPDPHSGSXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXSTPTPSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           XXXXXXXXXXXXX       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXCNYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRNDG 180
           XXXXXXXXX C YWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRNDG
Sbjct: 121 XXXXXXXXXTCTYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRNDG 180

Query: 181 YGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGDQANTFKLANEGKIKPR 238
           YGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAG+QANTFKLANEGKIKPR
Sbjct: 181 YGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGNQANTFKLANEGKIKPR 240

[Close]
BLAST of MELO3C019689.2 vs. TrEMBL
Match: tr|A0A151U278|A0A151U278_CAJCA (Uncharacterized protein C1orf170 isogeny family OS=Cajanus cajan OX=3821 GN=KK1_005984 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 5.8e-41
Identity = 83/111 (74.77%), Postives = 98/111 (88.29%), Query Frame = 0 

Query: 127 CNYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRNDGYGALLREGTA 186
           CNYW  HPG+IWG+LGWWGTLG+AFGA+NVPGFG +L+L QALSNTR DG GAL REGTA
Sbjct: 330 CNYWSTHPGIIWGLLGWWGTLGHAFGASNVPGFGASLSLPQALSNTRTDGLGALYREGTA 389

Query: 187 SYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGDQANTFKLANEGKIKPRA 238
           S+LNSL +NRFPYTT+QVR  FV++LSS+KAA  QAN FK+ANEG++KPRA
Sbjct: 390 SFLNSLVNNRFPYTTQQVRDRFVASLSSDKAAAAQANLFKMANEGRMKPRA 440


HSP 2 Score: 53.1 bits (126), Expect = 9.6e-04
Identity = 26/37 (70.27%), Postives = 34/37 (91.89%), Query Frame = 0 

Query: 10 LFTLLAGLLSQSLLIPVLSTSITDQKSYYSPPDPHSG 47
          +F LLAG+LSQ+L+IPV+ST+I DQK+YYS PDPH+G
Sbjct: 13 MFALLAGVLSQNLVIPVISTTIEDQKNYYS-PDPHAG 48

[Close]
BLAST of MELO3C019689.2 vs. TrEMBL
Match: tr|A0A2K2AJG8|A0A2K2AJG8_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_005G200900v3 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 5.8e-41
Identity = 169/274 (61.68%), Postives = 192/274 (70.07%), Query Frame = 0 

Query: 2   RSKQASALLFTLLAGLLSQSLLIPVLSTSITDQKSYYSPPDPHS---------------- 61
           +S QA  L++ L+AGLLS +L  PVL+T+  DQK+YYSPPDPHS                
Sbjct: 5   KSNQAPMLMWVLVAGLLSHNLAFPVLATTFEDQKNYYSPPDPHSRSPXXXXXXXXXXXXX 64

Query: 62  ----------------------GXXXXXXXXXXXXXXXXXXXXXXXSTPTPSTXXXXXXX 121
                                  XXXXXXXXXXXXXXXXXXXXXXX       X    XX
Sbjct: 65  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGTYXX 124

Query: 122 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCNYWLNHPGLIWGVLGW 181
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       CNYW  HP LIWGVLGW
Sbjct: 125 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPNSPFSCNYWRTHPALIWGVLGW 184

Query: 182 WGTLGNAFGATNVPGFGTNLNLLQALSNTRNDGYGALLREGTASYLNSLASNRFPYTTKQ 238
           WGT+GNAFG  ++PGFGT++ + QALSNTR DGYG L REGTAS LNS+ SNRFP+TT+Q
Sbjct: 185 WGTMGNAFGVGSLPGFGTSMTVQQALSNTRTDGYGTLYREGTASLLNSMVSNRFPFTTRQ 244

[Close]
BLAST of MELO3C019689.2 vs. TrEMBL
Match: tr|A0A2K2BE94|A0A2K2BE94_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_002G060800v3 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 7.6e-41
Identity = 177/268 (66.04%), Postives = 197/268 (73.51%), Query Frame = 0 

Query: 3   SKQASALLFTLLAGLLSQSLLIPVLSTSITDQKSYYSPPDPHS----------------- 62
           SKQAS L++ L AGLLS +L  PVL+T+  DQK+YYS PDPHS                 
Sbjct: 6   SKQASMLMWVLAAGLLSHNLAFPVLATTFEDQKNYYS-PDPHSRSPPSGSHRTPSHGSGG 65

Query: 63  -----------------GXXXXXXXXXXXXXXXXXXXXXXXSTPTPSTXXXXXXXXXXXX 122
                             XXXXXXXXXXXXXXXXXXXXXXX    P  XXXXXXXXXXXX
Sbjct: 66  SSVNPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPXXXXXXXXXXXXXX 125

Query: 123 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCNYWLNHPGLIWGVLGWWGTLG 182
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     CNYW  HP LIWGVLGWWGT+G
Sbjct: 126 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSPFSCNYWRTHPALIWGVLGWWGTMG 185

Query: 183 NAFGATNVPGFGTNLNLLQALSNTRNDGYGALLREGTASYLNSLASNRFPYTTKQVRTSF 237
           NAFG T +PGFGT++ L QALSNTR DGYG L REGTAS LNS+ SNRFP+TT+QVR +F
Sbjct: 186 NAFGVTRLPGFGTSMTLQQALSNTRTDGYGTLYREGTASLLNSMVSNRFPFTTRQVRENF 245

The following BLAST results are available for this feature:
BLAST of MELO3C019689.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008456355.17.6e-77100.00PREDICTED: protodermal factor 1-like [Cucumis melo][more]
XP_004143175.12.4e-6792.95PREDICTED: protodermal factor 1 [Cucumis sativus] >KGN47037.1 hypothetical prote... [more]
XP_022149747.11.9e-5976.37protodermal factor 1-like [Momordica charantia][more]
XP_022947015.17.1e-5983.40protodermal factor 1-like [Cucurbita moschata][more]
XP_022970795.12.1e-5881.67protodermal factor 1-like [Cucurbita maxima][more]
BLAST of MELO3C019689.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G42840.12.2e-3865.79protodermal factor 1[more]
AT2G20515.13.2e-0536.62unknown protein[more]
BLAST of MELO3C019689.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9S728|PDF1_ARATH4.0e-3765.79Protodermal factor 1 OS=Arabidopsis thaliana OX=3702 GN=PDF1 PE=2 SV=1[more]
BLAST of MELO3C019689.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3C4A9|A0A1S3C4A9_CUCME5.0e-77100.00protodermal factor 1-like OS=Cucumis melo OX=3656 GN=LOC103496321 PE=4 SV=1[more]
tr|A0A0A0KF76|A0A0A0KF76_CUCSA1.6e-6792.95Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G178950 PE=4 SV=1[more]
tr|A0A151U278|A0A151U278_CAJCA5.8e-4174.77Uncharacterized protein C1orf170 isogeny family OS=Cajanus cajan OX=3821 GN=KK1_... [more]
tr|A0A2K2AJG8|A0A2K2AJG8_POPTR5.8e-4161.68Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_005G200900v3 PE=... [more]
tr|A0A2K2BE94|A0A2K2BE94_POPTR7.6e-4166.04Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_002G060800v3 PE=... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0010075 regulation of meristem growth
cellular_component GO:0005576 extracellular region
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C019689.2.1MELO3C019689.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 90..119
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 33..119
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 56..89
NoneNo IPR availablePANTHERPTHR33210:SF6PROTODERMAL FACTOR 1coord: 71..236
NoneNo IPR availablePANTHERPTHR33210FAMILY NOT NAMEDcoord: 71..236

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C019689.2Csa6G423360Cucumber (Chinese Long) v2cumedB417
MELO3C019689.2Csa6G178950Cucumber (Chinese Long) v2cumedB406
MELO3C019689.2CSPI06G13410Wild cucumber (PI 183967)cpimedB415
MELO3C019689.2CSPI06G22880Wild cucumber (PI 183967)cpimedB423
MELO3C019689.2CmaCh02G000410Cucurbita maxima (Rimu)cmamedB627
MELO3C019689.2CmaCh11G019530Cucurbita maxima (Rimu)cmamedB091
MELO3C019689.2CmoCh11G020330Cucurbita moschata (Rifu)cmomedB084
MELO3C019689.2CmoCh02G000430Cucurbita moschata (Rifu)cmomedB616
MELO3C019689.2Lsi11G016450Bottle gourd (USVL1VR-Ls)lsimedB092
MELO3C019689.2Cp4.1LG05g15480Cucurbita pepo (Zucchini)cpemedB785
MELO3C019689.2Cp4.1LG04g02340Cucurbita pepo (Zucchini)cpemedB707
MELO3C019689.2CsGy6G013370Cucumber (Gy14) v2cgybmedB369
MELO3C019689.2CsGy6G022090Cucumber (Gy14) v2cgybmedB377
MELO3C019689.2Cla005534Watermelon (97103) v1medwmB081
MELO3C019689.2Cla013489Watermelon (97103) v1medwmB106
MELO3C019689.2ClCG02G018380Watermelon (Charleston Gray)medwcgB087
MELO3C019689.2ClCG09G022350Watermelon (Charleston Gray)medwcgB073
MELO3C019689.2Cla97C02G044190Watermelon (97103) v2medwmbB086
MELO3C019689.2Cla97C09G183800Watermelon (97103) v2medwmbB120
MELO3C019689.2Bhi10G000767Wax gourdmedwgoB129
MELO3C019689.2Bhi05G001777Wax gourdmedwgoB113
MELO3C019689.2Carg04661Silver-seed gourdcarmedB0395
MELO3C019689.2CsaV3_6G015810Cucumber (Chinese Long) v3cucmedB422
MELO3C019689.2CsaV3_6G038000Cucumber (Chinese Long) v3cucmedB429
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
MELO3C019689.2MELO3C014462.2Melon (DHL92) v3.6.1medmedB048
The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C019689.2Cucumber (Gy14) v1cgymedB228
MELO3C019689.2Cucurbita maxima (Rimu)cmamedB522
MELO3C019689.2Cucurbita maxima (Rimu)cmamedB569
MELO3C019689.2Cucurbita moschata (Rifu)cmomedB511
MELO3C019689.2Cucurbita moschata (Rifu)cmomedB557
MELO3C019689.2Cucurbita pepo (Zucchini)cpemedB252
MELO3C019689.2Cucurbita pepo (Zucchini)cpemedB301
MELO3C019689.2Bottle gourd (USVL1VR-Ls)lsimedB057
MELO3C019689.2Silver-seed gourdcarmedB0028
MELO3C019689.2Silver-seed gourdcarmedB0347
MELO3C019689.2Silver-seed gourdcarmedB0541