MELO3C019566 (gene) Melon (DHL92) v3.5.1

NameMELO3C019566
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionAutophagy protein 5
Locationchr6 : 12134760 .. 12135011 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGGAGCTGTGACCGGCAAGGGAAAGGATGTAGTGCCTGATGAAGAAGAGATCCCATCCCCACGCACTTTGGCTGCCCGATTGATGGCTGTTGAAGAAAGCATGGTAGACCTCAACGACCGAATGGGAAATCTTGAAACCTCCATGGAGAGACTTGTTCGCCGGCCTGAAGTGGCATTGATGGCCCTTCCACAGCAGCAAGAAATCGGCGACGGCAACCACCAAGAACTCCGGCACATTGCCGGTTGA

mRNA sequence

ATGAAGGGAGCTGTGACCGGCAAGGGAAAGGATGTAGTGCCTGATGAAGAAGAGATCCCATCCCCACGCACTTTGGCTGCCCGATTGATGGCTGTTGAAGAAAGCATGGTAGACCTCAACGACCGAATGGGAAATCTTGAAACCTCCATGGAGAGACTTGTTCGCCGGCCTGAAGTGGCATTGATGGCCCTTCCACAGCAGCAAGAAATCGGCGACGGCAACCACCAAGAACTCCGGCACATTGCCGGTTGA

Coding sequence (CDS)

ATGAAGGGAGCTGTGACCGGCAAGGGAAAGGATGTAGTGCCTGATGAAGAAGAGATCCCATCCCCACGCACTTTGGCTGCCCGATTGATGGCTGTTGAAGAAAGCATGGTAGACCTCAACGACCGAATGGGAAATCTTGAAACCTCCATGGAGAGACTTGTTCGCCGGCCTGAAGTGGCATTGATGGCCCTTCCACAGCAGCAAGAAATCGGCGACGGCAACCACCAAGAACTCCGGCACATTGCCGGTTGA

Protein sequence

MKGAVTGKGKDVVPDEEEIPSPRTLAARLMAVEESMVDLNDRMGNLETSMERLVRRPEVALMALPQQQEIGDGNHQELRHIAG*
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007239Atg5
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0006914autophagy
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006914 autophagy
biological_process GO:0006810 transport
cellular_component GO:0005737 cytoplasm
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU48491melon EST collection version 4.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C019566T1MELO3C019566T1mRNA
MELO3C019566T2MELO3C019566T2mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU48491MU48491transcribed_cluster


Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007239Autophagy-related protein 5PANTHERPTHR13040AUTOPHAGY PROTEIN 5coord: 1..76
score: 3.3

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None