MELO3C019557 (gene) Melon (DHL92) v3.5.1

NameMELO3C019557
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionUDP-glucose 4-epimerase family protein
Locationchr6 : 12007475 .. 12007811 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCCTTTGTACAGCAAGTTGCTGTCAGCAAGCGTCCTGCCTTGACAGTCTTTGGAACTGACTATTCAACAAAAGATGGAACTGGAGTAAGTTTATCGTAAGTTCATCATGCCCTTTTGCTTGATTGCTCGTTTTTCTTGTTGTACTTGATTTGCTTAGTCCGAGGCTTCCAATAATTTTCTCTTCCATTAAAAGATCTATTGTCCTCTGCAGGTACGTGATTATATTCACGTTGTTGATTTAGCTTATGGACACATTGCTGCATTGCGCAAGCTAGATGCGGCTGGTATAGGTAATACACTCAATATCTGGCTCTTTGCTTGTGGTGACTGGTAA

mRNA sequence

ATGCCCTTTGTACAGCAAGTTGCTGTCAGCAAGCGTCCTGCCTTGACAGTCTTTGGAACTGACTATTCAACAAAAGATGGAACTGGAGTACGTGATTATATTCACGTTGTTGATTTAGCTTATGGACACATTGCTGCATTGCGCAAGCTAGATGCGGCTGGTATAGGTAATACACTCAATATCTGGCTCTTTGCTTGTGGTGACTGGTAA

Coding sequence (CDS)

ATGCCCTTTGTACAGCAAGTTGCTGTCAGCAAGCGTCCTGCCTTGACAGTCTTTGGAACTGACTATTCAACAAAAGATGGAACTGGAGTACGTGATTATATTCACGTTGTTGATTTAGCTTATGGACACATTGCTGCATTGCGCAAGCTAGATGCGGCTGGTATAGGTAATACACTCAATATCTGGCTCTTTGCTTGTGGTGACTGGTAA

Protein sequence

MPFVQQVAVSKRPALTVFGTDYSTKDGTGVRDYIHVVDLAYGHIAALRKLDAAGIGNTLNIWLFACGDW*
BLAST of MELO3C019557 vs. Swiss-Prot
Match: UGE4_ORYSJ (UDP-glucose 4-epimerase 4 OS=Oryza sativa subsp. japonica GN=UGE-4 PE=2 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 3.2e-19
Identity = 45/56 (80.36%), Postives = 48/56 (85.71%), Query Frame = 1

Query: 1   MPFVQQVAVSKRPALTVFGTDYSTKDGTGVRDYIHVVDLAYGHIAALRKLDAAGIG 57
           MPFVQQVAV +RP+LT+FG DY+TKDGTGVRDYIHVVDLA GHIAALRKL  + IG
Sbjct: 220 MPFVQQVAVGRRPSLTIFGNDYATKDGTGVRDYIHVVDLAEGHIAALRKLFESSIG 275

BLAST of MELO3C019557 vs. Swiss-Prot
Match: UGE1_ORYSJ (UDP-glucose 4-epimerase 1 OS=Oryza sativa subsp. japonica GN=UGE-1 PE=2 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 5.4e-19
Identity = 45/50 (90.00%), Postives = 46/50 (92.00%), Query Frame = 1

Query: 1   MPFVQQVAVSKRPALTVFGTDYSTKDGTGVRDYIHVVDLAYGHIAALRKL 51
           MPFVQQVAV +RPALTV+GTDY+TKDGTGVRDYIHVVDLA GHIAALRKL
Sbjct: 209 MPFVQQVAVGRRPALTVYGTDYNTKDGTGVRDYIHVVDLADGHIAALRKL 258

BLAST of MELO3C019557 vs. Swiss-Prot
Match: GALE2_CYATE (UDP-glucose 4-epimerase GEPI48 OS=Cyamopsis tetragonoloba PE=2 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 7.1e-19
Identity = 46/56 (82.14%), Postives = 47/56 (83.93%), Query Frame = 1

Query: 1   MPFVQQVAVSKRPALTVFGTDYSTKDGTGVRDYIHVVDLAYGHIAALRKLDAAGIG 57
           MPFVQQVAV +RPALTVFG DY+T DGTGVRDYIHVVDLA GHIAALRKL+   IG
Sbjct: 206 MPFVQQVAVGRRPALTVFGNDYTTSDGTGVRDYIHVVDLADGHIAALRKLNDPKIG 261

BLAST of MELO3C019557 vs. Swiss-Prot
Match: UGE5_ARATH (UDP-glucose 4-epimerase 5 OS=Arabidopsis thaliana GN=UGE5 PE=1 SV=3)

HSP 1 Score: 94.0 bits (232), Expect = 7.1e-19
Identity = 45/56 (80.36%), Postives = 47/56 (83.93%), Query Frame = 1

Query: 1   MPFVQQVAVSKRPALTVFGTDYSTKDGTGVRDYIHVVDLAYGHIAALRKLDAAGIG 57
           MPFVQQVAV +RP LTVFG DY+TKDGTGVRDYIHV+DLA GHIAALRKL+   IG
Sbjct: 206 MPFVQQVAVGRRPHLTVFGNDYNTKDGTGVRDYIHVIDLADGHIAALRKLEDCKIG 261

BLAST of MELO3C019557 vs. Swiss-Prot
Match: UGE2_ARATH (UDP-glucose 4-epimerase 2 OS=Arabidopsis thaliana GN=UGE2 PE=1 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 1.6e-18
Identity = 44/51 (86.27%), Postives = 45/51 (88.24%), Query Frame = 1

Query: 1   MPFVQQVAVSKRPALTVFGTDYSTKDGTGVRDYIHVVDLAYGHIAALRKLD 52
           MP+VQQVAV +RP LTVFGTDY TKDGTGVRDYIHV+DLA GHIAALRKLD
Sbjct: 205 MPYVQQVAVGRRPHLTVFGTDYKTKDGTGVRDYIHVMDLADGHIAALRKLD 255

BLAST of MELO3C019557 vs. TrEMBL
Match: A0A0A0KYE5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G052620 PE=3 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 9.0e-21
Identity = 52/56 (92.86%), Postives = 54/56 (96.43%), Query Frame = 1

Query: 1   MPFVQQVAVSKRPALTVFGTDYSTKDGTGVRDYIHVVDLAYGHIAALRKLDAAGIG 57
           MPFVQQVAV +RPALTV+GTDYSTKDGTGVRDYIHVVDLA GHIAALRKLDAAGIG
Sbjct: 207 MPFVQQVAVGRRPALTVYGTDYSTKDGTGVRDYIHVVDLADGHIAALRKLDAAGIG 262

BLAST of MELO3C019557 vs. TrEMBL
Match: A0A059C2I6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E00872 PE=3 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.1e-18
Identity = 48/56 (85.71%), Postives = 52/56 (92.86%), Query Frame = 1

Query: 1   MPFVQQVAVSKRPALTVFGTDYSTKDGTGVRDYIHVVDLAYGHIAALRKLDAAGIG 57
           MPFVQQVAV +RPALTV+GTDYSTKDGTGVRDYIHVVDLA GHIAAL+KL+  GIG
Sbjct: 205 MPFVQQVAVGRRPALTVYGTDYSTKDGTGVRDYIHVVDLADGHIAALQKLEEPGIG 260

BLAST of MELO3C019557 vs. TrEMBL
Match: A0A0A0KQQ5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G148720 PE=3 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 2.5e-18
Identity = 48/56 (85.71%), Postives = 51/56 (91.07%), Query Frame = 1

Query: 1   MPFVQQVAVSKRPALTVFGTDYSTKDGTGVRDYIHVVDLAYGHIAALRKLDAAGIG 57
           MPFVQQVAV +RPALTVFG+DYSTKDGTGVRDYIHVVDLA GHIAALRK+D   IG
Sbjct: 205 MPFVQQVAVGRRPALTVFGSDYSTKDGTGVRDYIHVVDLADGHIAALRKVDDPSIG 260

BLAST of MELO3C019557 vs. TrEMBL
Match: W9RMQ8_9ROSA (UDP-glucose 4-epimerase GEPI48 OS=Morus notabilis GN=L484_002240 PE=3 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 5.5e-18
Identity = 48/56 (85.71%), Postives = 51/56 (91.07%), Query Frame = 1

Query: 1   MPFVQQVAVSKRPALTVFGTDYSTKDGTGVRDYIHVVDLAYGHIAALRKLDAAGIG 57
           MPFVQQVAV +RPALTVFG DYSTKDGTGVRDYIHVVDLA GHIAAL+KL+ A IG
Sbjct: 205 MPFVQQVAVGRRPALTVFGNDYSTKDGTGVRDYIHVVDLADGHIAALQKLEDAKIG 260

BLAST of MELO3C019557 vs. TrEMBL
Match: A0A061G5B1_THECC (UDP-D-glucose/UDP-D-galactose 4-epimerase 5 isoform 2 OS=Theobroma cacao GN=TCM_016477 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 7.1e-18
Identity = 48/56 (85.71%), Postives = 49/56 (87.50%), Query Frame = 1

Query: 1   MPFVQQVAVSKRPALTVFGTDYSTKDGTGVRDYIHVVDLAYGHIAALRKLDAAGIG 57
           MPFVQQVAV +RPALTVFG DYSTKDGTGVRDYIHVVDLA GHIAALRKL    IG
Sbjct: 144 MPFVQQVAVGRRPALTVFGNDYSTKDGTGVRDYIHVVDLADGHIAALRKLSDPNIG 199

BLAST of MELO3C019557 vs. TAIR10
Match: AT4G10960.1 (AT4G10960.1 UDP-D-glucose/UDP-D-galactose 4-epimerase 5)

HSP 1 Score: 94.0 bits (232), Expect = 4.0e-20
Identity = 45/56 (80.36%), Postives = 47/56 (83.93%), Query Frame = 1

Query: 1   MPFVQQVAVSKRPALTVFGTDYSTKDGTGVRDYIHVVDLAYGHIAALRKLDAAGIG 57
           MPFVQQVAV +RP LTVFG DY+TKDGTGVRDYIHV+DLA GHIAALRKL+   IG
Sbjct: 206 MPFVQQVAVGRRPHLTVFGNDYNTKDGTGVRDYIHVIDLADGHIAALRKLEDCKIG 261

BLAST of MELO3C019557 vs. TAIR10
Match: AT4G23920.1 (AT4G23920.1 UDP-D-glucose/UDP-D-galactose 4-epimerase 2)

HSP 1 Score: 92.8 bits (229), Expect = 8.9e-20
Identity = 44/51 (86.27%), Postives = 45/51 (88.24%), Query Frame = 1

Query: 1   MPFVQQVAVSKRPALTVFGTDYSTKDGTGVRDYIHVVDLAYGHIAALRKLD 52
           MP+VQQVAV +RP LTVFGTDY TKDGTGVRDYIHV+DLA GHIAALRKLD
Sbjct: 205 MPYVQQVAVGRRPHLTVFGTDYKTKDGTGVRDYIHVMDLADGHIAALRKLD 255

BLAST of MELO3C019557 vs. TAIR10
Match: AT1G64440.1 (AT1G64440.1 NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 85.5 bits (210), Expect = 1.4e-17
Identity = 40/56 (71.43%), Postives = 44/56 (78.57%), Query Frame = 1

Query: 1   MPFVQQVAVSKRPALTVFGTDYSTKDGTGVRDYIHVVDLAYGHIAALRKLDAAGIG 57
           MP+VQQV V + P L ++GTDY+TKDGTGVRDYIHVVDLA GHI AL+KLD   IG
Sbjct: 205 MPYVQQVVVGRLPNLKIYGTDYTTKDGTGVRDYIHVVDLADGHICALQKLDDTEIG 260

BLAST of MELO3C019557 vs. TAIR10
Match: AT1G12780.1 (AT1G12780.1 UDP-D-glucose/UDP-D-galactose 4-epimerase 1)

HSP 1 Score: 76.6 bits (187), Expect = 6.6e-15
Identity = 36/52 (69.23%), Postives = 41/52 (78.85%), Query Frame = 1

Query: 1   MPFVQQVAVSKRPALTVFGTDYSTKDGTGVRDYIHVVDLAYGHIAALRKLDA 53
           MP++QQVAV + P L V+G DY T+DG+ VRDYIHV+DLA GHIAALRKL A
Sbjct: 210 MPYIQQVAVGRLPELNVYGHDYPTEDGSAVRDYIHVMDLADGHIAALRKLFA 261

BLAST of MELO3C019557 vs. TAIR10
Match: AT1G63180.1 (AT1G63180.1 UDP-D-glucose/UDP-D-galactose 4-epimerase 3)

HSP 1 Score: 74.3 bits (181), Expect = 3.3e-14
Identity = 34/50 (68.00%), Postives = 38/50 (76.00%), Query Frame = 1

Query: 1   MPFVQQVAVSKRPALTVFGTDYSTKDGTGVRDYIHVVDLAYGHIAALRKL 51
           MP++QQVAV + P L VFG DY T DG+ VRDYIHV+DLA GH+AAL KL
Sbjct: 210 MPYIQQVAVGRLPELNVFGHDYPTMDGSAVRDYIHVMDLADGHVAALNKL 259

BLAST of MELO3C019557 vs. NCBI nr
Match: gi|659102107|ref|XP_008451956.1| (PREDICTED: UDP-glucose 4-epimerase GEPI48-like [Cucumis melo])

HSP 1 Score: 108.2 bits (269), Expect = 5.8e-21
Identity = 53/56 (94.64%), Postives = 54/56 (96.43%), Query Frame = 1

Query: 1   MPFVQQVAVSKRPALTVFGTDYSTKDGTGVRDYIHVVDLAYGHIAALRKLDAAGIG 57
           MPFVQQVAV +RPALTVFGTDYSTKDGTGVRDYIHVVDLA GHIAALRKLDAAGIG
Sbjct: 207 MPFVQQVAVGRRPALTVFGTDYSTKDGTGVRDYIHVVDLADGHIAALRKLDAAGIG 262

BLAST of MELO3C019557 vs. NCBI nr
Match: gi|449462531|ref|XP_004148994.1| (PREDICTED: UDP-glucose 4-epimerase GEPI48-like [Cucumis sativus])

HSP 1 Score: 107.1 bits (266), Expect = 1.3e-20
Identity = 52/56 (92.86%), Postives = 54/56 (96.43%), Query Frame = 1

Query: 1   MPFVQQVAVSKRPALTVFGTDYSTKDGTGVRDYIHVVDLAYGHIAALRKLDAAGIG 57
           MPFVQQVAV +RPALTV+GTDYSTKDGTGVRDYIHVVDLA GHIAALRKLDAAGIG
Sbjct: 207 MPFVQQVAVGRRPALTVYGTDYSTKDGTGVRDYIHVVDLADGHIAALRKLDAAGIG 262

BLAST of MELO3C019557 vs. NCBI nr
Match: gi|470125843|ref|XP_004298907.1| (PREDICTED: UDP-glucose 4-epimerase GEPI48-like [Fragaria vesca subsp. vesca])

HSP 1 Score: 100.5 bits (249), Expect = 1.2e-18
Identity = 47/56 (83.93%), Postives = 52/56 (92.86%), Query Frame = 1

Query: 1   MPFVQQVAVSKRPALTVFGTDYSTKDGTGVRDYIHVVDLAYGHIAALRKLDAAGIG 57
           MPFVQQVAV +RPALTVFG DY+TKDGTGVRDY+HV DLA+GHIAAL+KLDAA IG
Sbjct: 205 MPFVQQVAVGRRPALTVFGNDYNTKDGTGVRDYVHVDDLAHGHIAALKKLDAASIG 260

BLAST of MELO3C019557 vs. NCBI nr
Match: gi|702338389|ref|XP_010055874.1| (PREDICTED: UDP-glucose 4-epimerase GEPI48 [Eucalyptus grandis])

HSP 1 Score: 100.1 bits (248), Expect = 1.6e-18
Identity = 48/56 (85.71%), Postives = 52/56 (92.86%), Query Frame = 1

Query: 1   MPFVQQVAVSKRPALTVFGTDYSTKDGTGVRDYIHVVDLAYGHIAALRKLDAAGIG 57
           MPFVQQVAV +RPALTV+GTDYSTKDGTGVRDYIHVVDLA GHIAAL+KL+  GIG
Sbjct: 205 MPFVQQVAVGRRPALTVYGTDYSTKDGTGVRDYIHVVDLADGHIAALQKLEEPGIG 260

BLAST of MELO3C019557 vs. NCBI nr
Match: gi|1009156117|ref|XP_015896075.1| (PREDICTED: UDP-glucose 4-epimerase GEPI48 [Ziziphus jujuba])

HSP 1 Score: 99.8 bits (247), Expect = 2.1e-18
Identity = 50/56 (89.29%), Postives = 51/56 (91.07%), Query Frame = 1

Query: 1   MPFVQQVAVSKRPALTVFGTDYSTKDGTGVRDYIHVVDLAYGHIAALRKLDAAGIG 57
           MPFVQQVAV +RPALTVFGTDYSTKDGTGVRDYIHVVDLA GHIAAL KLD A IG
Sbjct: 206 MPFVQQVAVGRRPALTVFGTDYSTKDGTGVRDYIHVVDLADGHIAALCKLDDAKIG 261

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
UGE4_ORYSJ3.2e-1980.36UDP-glucose 4-epimerase 4 OS=Oryza sativa subsp. japonica GN=UGE-4 PE=2 SV=1[more]
UGE1_ORYSJ5.4e-1990.00UDP-glucose 4-epimerase 1 OS=Oryza sativa subsp. japonica GN=UGE-1 PE=2 SV=1[more]
GALE2_CYATE7.1e-1982.14UDP-glucose 4-epimerase GEPI48 OS=Cyamopsis tetragonoloba PE=2 SV=1[more]
UGE5_ARATH7.1e-1980.36UDP-glucose 4-epimerase 5 OS=Arabidopsis thaliana GN=UGE5 PE=1 SV=3[more]
UGE2_ARATH1.6e-1886.27UDP-glucose 4-epimerase 2 OS=Arabidopsis thaliana GN=UGE2 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0KYE5_CUCSA9.0e-2192.86Uncharacterized protein OS=Cucumis sativus GN=Csa_4G052620 PE=3 SV=1[more]
A0A059C2I6_EUCGR1.1e-1885.71Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E00872 PE=3 SV=1[more]
A0A0A0KQQ5_CUCSA2.5e-1885.71Uncharacterized protein OS=Cucumis sativus GN=Csa_5G148720 PE=3 SV=1[more]
W9RMQ8_9ROSA5.5e-1885.71UDP-glucose 4-epimerase GEPI48 OS=Morus notabilis GN=L484_002240 PE=3 SV=1[more]
A0A061G5B1_THECC7.1e-1885.71UDP-D-glucose/UDP-D-galactose 4-epimerase 5 isoform 2 OS=Theobroma cacao GN=TCM_... [more]
Match NameE-valueIdentityDescription
AT4G10960.14.0e-2080.36 UDP-D-glucose/UDP-D-galactose 4-epimerase 5[more]
AT4G23920.18.9e-2086.27 UDP-D-glucose/UDP-D-galactose 4-epimerase 2[more]
AT1G64440.11.4e-1771.43 NAD(P)-binding Rossmann-fold superfamily protein[more]
AT1G12780.16.6e-1569.23 UDP-D-glucose/UDP-D-galactose 4-epimerase 1[more]
AT1G63180.13.3e-1468.00 UDP-D-glucose/UDP-D-galactose 4-epimerase 3[more]
Match NameE-valueIdentityDescription
gi|659102107|ref|XP_008451956.1|5.8e-2194.64PREDICTED: UDP-glucose 4-epimerase GEPI48-like [Cucumis melo][more]
gi|449462531|ref|XP_004148994.1|1.3e-2092.86PREDICTED: UDP-glucose 4-epimerase GEPI48-like [Cucumis sativus][more]
gi|470125843|ref|XP_004298907.1|1.2e-1883.93PREDICTED: UDP-glucose 4-epimerase GEPI48-like [Fragaria vesca subsp. vesca][more]
gi|702338389|ref|XP_010055874.1|1.6e-1885.71PREDICTED: UDP-glucose 4-epimerase GEPI48 [Eucalyptus grandis][more]
gi|1009156117|ref|XP_015896075.1|2.1e-1889.29PREDICTED: UDP-glucose 4-epimerase GEPI48 [Ziziphus jujuba][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001509Epimerase_deHydtase
IPR016040NAD(P)-bd_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0050662coenzyme binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006012 galactose metabolic process
biological_process GO:0009225 nucleotide-sugar metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0050662 coenzyme binding
molecular_function GO:0003978 UDP-glucose 4-epimerase activity
molecular_function GO:0003824 catalytic activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C019557T1MELO3C019557T1mRNA


Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001509NAD-dependent epimerase/dehydratase, N-terminal domainPFAMPF01370Epimerasecoord: 4..61
score: 2.
IPR016040NAD(P)-binding domainunknownSSF51735NAD(P)-binding Rossmann-fold domainscoord: 2..61
score: 4.93
NoneNo IPR availableGENE3DG3DSA:3.90.25.10coord: 1..54
score: 1.
NoneNo IPR availablePANTHERPTHR10366NAD DEPENDENT EPIMERASE/DEHYDRATASEcoord: 3..49
score: 8.4
NoneNo IPR availablePANTHERPTHR10366:SF308SUBFAMILY NOT NAMEDcoord: 3..49
score: 8.4

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None