MELO3C019530.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C019530.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	subtilisin-like protease SBT3.17 isoform X1
Location	chr06 : 12527997 .. 12528269 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCACCAACATTGGGTCTAATGACCTTGTCGGGTATGAGGGGTTTGACATGCCGAATGGAAACGATATGGAGTTTCTATCCATGTACAGCCAAGGGATTTACATGTCCCAGGATGATGTATGCGCATCACGATCTTCTCGTGCATCAGACGCTAGGCCTAGATTGAGCAGCTCCAAGCGAAAGAGGGGAAGCCAACGAGAGAATAAAATTGAGATGATACATATGATCCCCGAGTGTGTGAATGACCAACTAAGGACCATTGTCGAGTGA

mRNA sequence

ATGTTCACCAACATTGGGTCTAATGACCTTGTCGGGTATGAGGGGTTTGACATGCCGAATGGAAACGATATGGAGTTTCTATCCATGTACAGCCAAGGGATTTACATGTCCCAGGATGATGTATGCGCATCACGATCTTCTCGTGCATCAGACGCTAGGCCTAGATTGAGCAGCTCCAAGCGAAAGAGGGGAAGCCAACGAGAGAATAAAATTGAGATGATACATATGATCCCCGAGTGTGTGAATGACCAACTAAGGACCATTGTCGAGTGA

Coding sequence (CDS)

ATGTTCACCAACATTGGGTCTAATGACCTTGTCGGGTATGAGGGGTTTGACATGCCGAATGGAAACGATATGGAGTTTCTATCCATGTACAGCCAAGGGATTTACATGTCCCAGGATGATGTATGCGCATCACGATCTTCTCGTGCATCAGACGCTAGGCCTAGATTGAGCAGCTCCAAGCGAAAGAGGGGAAGCCAACGAGAGAATAAAATTGAGATGATACATATGATCCCCGAGTGTGTGAATGACCAACTAAGGACCATTGTCGAGTGA

Protein sequence

MFTNIGSNDLVGYEGFDMPNGNDMEFLSMYSQGIYMSQDDVCASRSSRASDARPRLSSSKRKRGSQRENKIEMIHMIPECVNDQLRTIVE

Homology

[Close]

BLAST of MELO3C019530.2 vs. NCBI nr
Match: XP_016900897.1 (PREDICTED: uncharacterized protein LOC103491960 [Cucumis melo] >XP_016900898.1 PREDICTED: uncharacterized protein LOC103491960 [Cucumis melo])

HSP 1 Score: 105.1 bits (261), Expect = 1.2e-19
Identity = 59/89 (66.29%), Postives = 65/89 (73.03%), Query Frame = 0


Query: 2   FTNIGSNDLVGYEGFDMPNGNDMEFLSMYSQGIYMSQDDVCASRSSRASDARPRLSSSKR 61
           F +I SN+L GYEGFDM + NDMEF  MYSQ I MSQDDV ASR    SD+R   S SK+
Sbjct: 30  FVDIESNELAGYEGFDMSDENDMEFPFMYSQRIVMSQDDVRASRPYSVSDSRTGSSGSKQ 89

Query: 62  KRGSQRENKIEMIHMIPECVNDQLRTIVE 91
           KR SQ E +IEMIHM  EC NDQLRTIVE
Sbjct: 90  KRESQWEGEIEMIHMALECANDQLRTIVE 118

[Close]

BLAST of MELO3C019530.2 vs. NCBI nr
Match: XP_008444620.1 (PREDICTED: uncharacterized protein LOC103487886 [Cucumis melo])

HSP 1 Score: 70.9 bits (172), Expect = 2.6e-09
Identity = 38/60 (63.33%), Postives = 44/60 (73.33%), Query Frame = 0


Query: 2   FTNIGSNDLVGYEGFDMPNGNDMEFLSMYSQGIYMSQDDVCASRSSRASDARPRLSSSKR 61
           FT+IGSND   YEGF  P+GNDME  ++YSQG  MSQ+DV A R S ASD+R R S SKR
Sbjct: 66  FTDIGSNDPSRYEGFQPPDGNDMEIPTIYSQGFNMSQEDVWAPRPSSASDSRTRSSGSKR 125

[Close]

BLAST of MELO3C019530.2 vs. NCBI nr
Match: XP_004148199.2 (PREDICTED: RING-H2 finger protein ATL66 [Cucumis sativus])

HSP 1 Score: 65.5 bits (158), Expect = 1.1e-07
Identity = 38/89 (42.70%), Postives = 53/89 (59.55%), Query Frame = 0


Query: 2   FTNIGSNDLVGYEGFDMPNGNDMEFLSMYSQGIYMSQDDVCASRSSRASDARPRLSSSKR 61
           F ++GSN    Y+GF   +GN+ME  +MY QG+ MS +D+  +R SR+S+ R   S SKR
Sbjct: 179 FIDVGSNVSDEYKGFPTEDGNNMEIPTMYCQGLNMSPEDIMDTRPSRSSECRTGSSRSKR 238

Query: 62  KRGSQRENKIEMIHMIPECVNDQLRTIVE 91
           KR  Q    +E+     E  NDQL+ I E
Sbjct: 239 KRRGQDVETMEVTCSAMEYANDQLKAIAE 267

[Close]

BLAST of MELO3C019530.2 vs. NCBI nr
Match: ADN33754.1 (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 62.0 bits (149), Expect = 1.2e-06
Identity = 39/90 (43.33%), Postives = 55/90 (61.11%), Query Frame = 0


Query: 2   FTNIGSNDL-VGYEGFDMPNGNDMEFLSMYSQGIYMSQDDVCASRSSRASDARPRLSSSK 61
           F ++GSN+   GY+ FDM +GN+ +F  +YS+G+ + QDDV ASR S             
Sbjct: 466 FADVGSNEPGGGYDRFDMGDGNE-DFPPVYSRGVDILQDDVRASRPSXXXXXXXXXXXXX 525

Query: 62  RKRGSQRENKIEMIHMIPECVNDQLRTIVE 91
           RKRGSQR+  +E IH+  +  N+QLR I E
Sbjct: 526 RKRGSQRDFDVEAIHLALDQTNEQLRQIAE 554

[Close]

BLAST of MELO3C019530.2 vs. NCBI nr
Match: XP_008441954.1 (PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo])

HSP 1 Score: 58.2 bits (139), Expect = 1.7e-05
Identity = 34/90 (37.78%), Postives = 56/90 (62.22%), Query Frame = 0


Query: 2   FTNIGSN-DLVGYEGFDMPNGNDMEFLSMYSQGIYMSQDDVCASRSSRASDARPRLSSSK 61
           F N+GSN   +  +   + + +D +  +MYSQG++MS D++   R+ +AS+ R   S SK
Sbjct: 149 FPNVGSNVSNMFNDTIPLGDSHDEDIPTMYSQGVHMSPDEMFGIRAGQASERRNCSSVSK 208

Query: 62  RKRGSQRENKIEMIHMIPECVNDQLRTIVE 91
           RKRGS+R   +E+I  + E  N+QL+ I +
Sbjct: 209 RKRGSERYETVEVIRSVMEFGNEQLKAIAD 238

[Close]

BLAST of MELO3C019530.2 vs. TrEMBL
Match: tr|A0A1S4DY48|A0A1S4DY48_CUCME (uncharacterized protein LOC103491960 OS=Cucumis melo OX=3656 GN=LOC103491960 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 8.1e-20
Identity = 59/89 (66.29%), Postives = 65/89 (73.03%), Query Frame = 0


Query: 2   FTNIGSNDLVGYEGFDMPNGNDMEFLSMYSQGIYMSQDDVCASRSSRASDARPRLSSSKR 61
           F +I SN+L GYEGFDM + NDMEF  MYSQ I MSQDDV ASR    SD+R   S SK+
Sbjct: 30  FVDIESNELAGYEGFDMSDENDMEFPFMYSQRIVMSQDDVRASRPYSVSDSRTGSSGSKQ 89

Query: 62  KRGSQRENKIEMIHMIPECVNDQLRTIVE 91
           KR SQ E +IEMIHM  EC NDQLRTIVE
Sbjct: 90  KRESQWEGEIEMIHMALECANDQLRTIVE 118

[Close]

BLAST of MELO3C019530.2 vs. TrEMBL
Match: tr|A0A1S3BAQ2|A0A1S3BAQ2_CUCME (uncharacterized protein LOC103487886 OS=Cucumis melo OX=3656 GN=LOC103487886 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.7e-09
Identity = 38/60 (63.33%), Postives = 44/60 (73.33%), Query Frame = 0


Query: 2   FTNIGSNDLVGYEGFDMPNGNDMEFLSMYSQGIYMSQDDVCASRSSRASDARPRLSSSKR 61
           FT+IGSND   YEGF  P+GNDME  ++YSQG  MSQ+DV A R S ASD+R R S SKR
Sbjct: 66  FTDIGSNDPSRYEGFQPPDGNDMEIPTIYSQGFNMSQEDVWAPRPSSASDSRTRSSGSKR 125

[Close]

BLAST of MELO3C019530.2 vs. TrEMBL
Match: tr|E5GBB2|E5GBB2_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 7.9e-07
Identity = 39/90 (43.33%), Postives = 55/90 (61.11%), Query Frame = 0


Query: 2   FTNIGSNDL-VGYEGFDMPNGNDMEFLSMYSQGIYMSQDDVCASRSSRASDARPRLSSSK 61
           F ++GSN+   GY+ FDM +GN+ +F  +YS+G+ + QDDV ASR S             
Sbjct: 466 FADVGSNEPGGGYDRFDMGDGNE-DFPPVYSRGVDILQDDVRASRPSXXXXXXXXXXXXX 525

Query: 62  RKRGSQRENKIEMIHMIPECVNDQLRTIVE 91
           RKRGSQR+  +E IH+  +  N+QLR I E
Sbjct: 526 RKRGSQRDFDVEAIHLALDQTNEQLRQIAE 554

[Close]

BLAST of MELO3C019530.2 vs. TrEMBL
Match: tr|A0A1S3B4L3|A0A1S3B4L3_CUCME (uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.1e-05
Identity = 34/90 (37.78%), Postives = 56/90 (62.22%), Query Frame = 0


Query: 2   FTNIGSN-DLVGYEGFDMPNGNDMEFLSMYSQGIYMSQDDVCASRSSRASDARPRLSSSK 61
           F N+GSN   +  +   + + +D +  +MYSQG++MS D++   R+ +AS+ R   S SK
Sbjct: 149 FPNVGSNVSNMFNDTIPLGDSHDEDIPTMYSQGVHMSPDEMFGIRAGQASERRNCSSVSK 208

Query: 62  RKRGSQRENKIEMIHMIPECVNDQLRTIVE 91
           RKRGS+R   +E+I  + E  N+QL+ I +
Sbjct: 209 RKRGSERYETVEVIRSVMEFGNEQLKAIAD 238

[Close]

BLAST of MELO3C019530.2 vs. TrEMBL
Match: tr|A0A0A0L3I2|A0A0A0L3I2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G000030 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 3.3e-05
Identity = 36/73 (49.32%), Postives = 46/73 (63.01%), Query Frame = 0


Query: 5   IGSNDLVGYEGFDMPNGNDMEFLSMYSQGIYMSQDDVCASRSSRASDARPRLSSSKRKRG 64
           +GSN L GYEGF   +GNDMEF +MYSQ + +S D++  +R SRA D R   S SKRK  
Sbjct: 40  VGSNVLGGYEGFASDDGNDMEFPTMYSQRLDISPDEIMETR-SRAGDRRNASSKSKRK-- 99

Query: 65  SQRENKIEMIHMI 78
             R   IE  H++
Sbjct: 100 -WRGQSIETAHIL 108

The following BLAST results are available for this feature:

BLAST of MELO3C019530.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016900897.1	1.2e-19	66.29	PREDICTED: uncharacterized protein LOC103491960 [Cucumis melo] >XP_016900898.1 P...	[more]
XP_008444620.1	2.6e-09	63.33	PREDICTED: uncharacterized protein LOC103487886 [Cucumis melo]	[more]
XP_004148199.2	1.1e-07	42.70	PREDICTED: RING-H2 finger protein ATL66 [Cucumis sativus]	[more]
ADN33754.1	1.2e-06	43.33	retrotransposon protein [Cucumis melo subsp. melo]	[more]
XP_008441954.1	1.7e-05	37.78	PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo]	[more]

BLAST of MELO3C019530.2 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of MELO3C019530.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of MELO3C019530.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4DY48\|A0A1S4DY48_CUCME	8.1e-20	66.29	uncharacterized protein LOC103491960 OS=Cucumis melo OX=3656 GN=LOC103491960 PE=...	[more]
tr\|A0A1S3BAQ2\|A0A1S3BAQ2_CUCME	1.7e-09	63.33	uncharacterized protein LOC103487886 OS=Cucumis melo OX=3656 GN=LOC103487886 PE=...	[more]
tr\|E5GBB2\|E5GBB2_CUCME	7.9e-07	43.33	Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
tr\|A0A1S3B4L3\|A0A1S3B4L3_CUCME	1.1e-05	37.78	uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=...	[more]
tr\|A0A0A0L3I2\|A0A0A0L3I2_CUCSA	3.3e-05	49.32	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G000030 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008233	peptidase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C019530.2.1	MELO3C019530.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..69
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..69

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C019530.2	Watermelon (97103) v2	medwmbB421
MELO3C019530.2	Watermelon (97103) v2	medwmbB424
MELO3C019530.2	Wax gourd	medwgoB531
MELO3C019530.2	Wax gourd	medwgoB558
MELO3C019530.2	Cucumber (Gy14) v2	cgybmedB215
MELO3C019530.2	Cucumber (Gy14) v2	cgybmedB492
MELO3C019530.2	Cucumber (Gy14) v1	cgymedB379
MELO3C019530.2	Cucumber (Gy14) v1	cgymedB412
MELO3C019530.2	Cucurbita maxima (Rimu)	cmamedB151
MELO3C019530.2	Cucurbita maxima (Rimu)	cmamedB346
MELO3C019530.2	Cucurbita maxima (Rimu)	cmamedB560
MELO3C019530.2	Cucurbita maxima (Rimu)	cmamedB777
MELO3C019530.2	Cucurbita moschata (Rifu)	cmomedB139
MELO3C019530.2	Cucurbita moschata (Rifu)	cmomedB332
MELO3C019530.2	Cucurbita moschata (Rifu)	cmomedB547
MELO3C019530.2	Cucurbita moschata (Rifu)	cmomedB774
MELO3C019530.2	Cucurbita pepo (Zucchini)	cpemedB234
MELO3C019530.2	Cucurbita pepo (Zucchini)	cpemedB481
MELO3C019530.2	Cucurbita pepo (Zucchini)	cpemedB764
MELO3C019530.2	Wild cucumber (PI 183967)	cpimedB239
MELO3C019530.2	Wild cucumber (PI 183967)	cpimedB552
MELO3C019530.2	Cucumber (Chinese Long) v2	cumedB238
MELO3C019530.2	Cucumber (Chinese Long) v2	cumedB534
MELO3C019530.2	Melon (DHL92) v3.6.1	medmedB091
MELO3C019530.2	Bottle gourd (USVL1VR-Ls)	lsimedB280
MELO3C019530.2	Bottle gourd (USVL1VR-Ls)	lsimedB384
MELO3C019530.2	Watermelon (Charleston Gray)	medwcgB413
MELO3C019530.2	Watermelon (Charleston Gray)	medwcgB417
MELO3C019530.2	Watermelon (97103) v1	medwmB448
MELO3C019530.2	Watermelon (97103) v1	medwmB472
MELO3C019530.2	Silver-seed gourd	carmedB0307
MELO3C019530.2	Silver-seed gourd	carmedB0384
MELO3C019530.2	Cucumber (Chinese Long) v3	cucmedB246
MELO3C019530.2	Cucumber (Chinese Long) v3	cucmedB566