MELO3C019466 (gene) Melon (DHL92) v3.5.1

NameMELO3C019466
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionLeucine-rich repeat protein kinase family protein
Locationchr6 : 10121901 .. 10122809 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAGGATCATGCTGCTATATTGCATAATGATGGAGATCCTGGTTAATATAGGCGAGATCATCTGCGAGCATGTAACAGCATGGGTTAAGCATCCACACGGGTCAAAGCTTTTTACGTGTCTTATTGAGCAACTCTGCATAAAGGCGTGCCTAGAGTTAGAAAAATCTCTCCAAGTTCAAGAAAGTGATGGAGTGTGTTCTAGACCAACTCTCCATCGCGTCATTACGATCCACAAGAACAAAGCAAAGCTCAGACACCTCAAGACCAAACAAGAAGGTCAAAAAGAGGTCAAAATGTGGATAACGAAGAAGAAGAAAAAAGGGAAAGCAGAAGAAGTCCCACTGAAACGCAAGAGGTAAGGTGAGAAGGAGACCTCAGAATCAAAGGATGCTAAAACCTCTAATGCCAGGGACTCTAAGGAAACCTTGCCTCTTGCATCATCAAGAAGTTCCGCCAAGAAGAAGTCCACCAATCCTCTCTCACCCATTAAGTGTAAACTCTCCAAAGCTACAACCTCTCAAATTCCCACAAAATCTAAAACGCCAACAAAGCCTCAAGCCTGCCCGCAATCCCAAAAATCCAAAACCACAAAATCCAAATCACCACCACTCATCAATGATCTGACCACCACTTCCTCGCCAAGGCACGAAACTGACAAAGATCGTGCCCTTGTTTTATTTGAGTCAATCAAAACCTCCTTCCTGCATCAAGAGAAAACTCCTCAACCTCTTGATGCAATCCCTATCAACCAAACCAAACTGCCAAGCTCTAAAACTTCAAATCAGGATGTCTTCCATGAAACCTCCTTTGACCCAACAACATTATTGGATGAGGCGACTAGAGAATCTGAGGAAGGAGAAAAAGAAAAGGAAGTCCTGAAGGAGGCTACTGATGACCCACTCTAA

mRNA sequence

ATGGAGAGGATCATGCTGCTATATTGCATAATGATGGAGATCCTGGTTAATATAGGCGAGATCATCTGCGAGCATGTAACAGCATGGGTTAAGCATCCACACGGGTCAAAGCTTTTTACGTGTCTTATTGAGCAACTCTGCATAAAGGCGTGCCTAGAGTTAGAAAAATCTCTCCAAGTTCAAGAAAGTGATGGAGTGTGTTCTAGACCAACTCTCCATCGCGTCATTACGATCCACAAGAACAAAGCAAAGCTCAGACACCTCAAGACCAAACAAGAAGGTCAAAAAGAGGTCAAAATGTGGATAACGAAGAAGAAGAAAAAAGGGAAAGCAGAAGAAGTCCCACTGAAACGCAAGAGGGACTCTAAGGAAACCTTGCCTCTTGCATCATCAAGAAGTTCCGCCAAGAAGAAGTCCACCAATCCTCTCTCACCCATTAAGTGTAAACTCTCCAAAGCTACAACCTCTCAAATTCCCACAAAATCTAAAACGCCAACAAAGCCTCAAGCCTGCCCGCAATCCCAAAAATCCAAAACCACAAAATCCAAATCACCACCACTCATCAATGATCTGACCACCACTTCCTCGCCAAGGCACGAAACTGACAAAGATCGTGCCCTTGTTTTATTTGAGTCAATCAAAACCTCCTTCCTGCATCAAGAGAAAACTCCTCAACCTCTTGATGCAATCCCTATCAACCAAACCAAACTGCCAAGCTCTAAAACTTCAAATCAGGATGTCTTCCATGAAACCTCCTTTGACCCAACAACATTATTGGATGAGGCGACTAGAGAATCTGAGGAAGGAGAAAAAGAAAAGGAAGTCCTGAAGGAGGCTACTGATGACCCACTCTAA

Coding sequence (CDS)

ATGGAGAGGATCATGCTGCTATATTGCATAATGATGGAGATCCTGGTTAATATAGGCGAGATCATCTGCGAGCATGTAACAGCATGGGTTAAGCATCCACACGGGTCAAAGCTTTTTACGTGTCTTATTGAGCAACTCTGCATAAAGGCGTGCCTAGAGTTAGAAAAATCTCTCCAAGTTCAAGAAAGTGATGGAGTGTGTTCTAGACCAACTCTCCATCGCGTCATTACGATCCACAAGAACAAAGCAAAGCTCAGACACCTCAAGACCAAACAAGAAGGTCAAAAAGAGGTCAAAATGTGGATAACGAAGAAGAAGAAAAAAGGGAAAGCAGAAGAAGTCCCACTGAAACGCAAGAGGGACTCTAAGGAAACCTTGCCTCTTGCATCATCAAGAAGTTCCGCCAAGAAGAAGTCCACCAATCCTCTCTCACCCATTAAGTGTAAACTCTCCAAAGCTACAACCTCTCAAATTCCCACAAAATCTAAAACGCCAACAAAGCCTCAAGCCTGCCCGCAATCCCAAAAATCCAAAACCACAAAATCCAAATCACCACCACTCATCAATGATCTGACCACCACTTCCTCGCCAAGGCACGAAACTGACAAAGATCGTGCCCTTGTTTTATTTGAGTCAATCAAAACCTCCTTCCTGCATCAAGAGAAAACTCCTCAACCTCTTGATGCAATCCCTATCAACCAAACCAAACTGCCAAGCTCTAAAACTTCAAATCAGGATGTCTTCCATGAAACCTCCTTTGACCCAACAACATTATTGGATGAGGCGACTAGAGAATCTGAGGAAGGAGAAAAAGAAAAGGAAGTCCTGAAGGAGGCTACTGATGACCCACTCTAA

Protein sequence

MERIMLLYCIMMEILVNIGEIICEHVTAWVKHPHGSKLFTCLIEQLCIKACLELEKSLQVQESDGVCSRPTLHRVITIHKNKAKLRHLKTKQEGQKEVKMWITKKKKKGKAEEVPLKRKRDSKETLPLASSRSSAKKKSTNPLSPIKCKLSKATTSQIPTKSKTPTKPQACPQSQKSKTTKSKSPPLINDLTTTSSPRHETDKDRALVLFESIKTSFLHQEKTPQPLDAIPINQTKLPSSKTSNQDVFHETSFDPTTLLDEATRESEEGEKEKEVLKEATDDPL*
BLAST of MELO3C019466 vs. Swiss-Prot
Match: Y7875_DICDI (PH domain-containing protein DDB_G0287875 OS=Dictyostelium discoideum GN=DDB_G0287875 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 5.6e-06
Identity = 62/243 (25.51%), Postives = 101/243 (41.56%), Query Frame = 1

Query: 53  ELEKSLQVQESDGVCSRPTLHRVITIHKNKAKLRHLKTKQEGQKEVKMWITKKKKKGKAE 112
           E EKS  +Q    +  RP++    TI     +L+ ++ K+E +  +K    K+K++ + E
Sbjct: 503 EEEKSKFLQSC--INPRPSVEPEQTISIRDKQLKLMREKKEEEDRLK----KEKEEKEKE 562

Query: 113 EVPLKRKRDSKETLPLASSRSSAKKKSTNPLSPIKCKLSKATTSQIPTKSKTPTKPQACP 172
           E     K  S      +S  S+A   ST P  P    L K T S++P +   PT   + P
Sbjct: 563 EKEKLEKESSAAAAATSSIASTANSNSTEPPKPTTVPLKK-TISKLPPRKLPPT--VSSP 622

Query: 173 QSQKSKTTKSKSPPLINDLTTTSSPRHE---TDKDRALVLFESIKTSFLHQEKTPQPL-D 232
            +  + T  +  P  +   TTT+SP      T K       +   T+ L  +   +PL  
Sbjct: 623 TTTTTTTVPTTVPTTVTTTTTTTSPTTSPTLTPKQPIGTTIKKPATAPLKLKPVAKPLPQ 682

Query: 233 AIPINQTKLPSSKTSNQDVFHETSFDPT--------TLLDEATRESEEGEK-EKEVLKEA 283
             P + T   ++ T+       T    T          L++A  E E+ EK E+E LK+ 
Sbjct: 683 PTPSSSTSTTTTPTTTPSSPKPTPVPRTPQLEKEKQDRLEKARLEKEKAEKEEQEFLKQQ 736

BLAST of MELO3C019466 vs. TrEMBL
Match: E5GCD9_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 2.1e-36
Identity = 83/120 (69.17%), Postives = 94/120 (78.33%), Query Frame = 1

Query: 165 PTKPQACPQSQKSKTTKSKSPPLINDLTTTSSPRHETDKDRALVLFESIKTSFLHQEKTP 224
           PT  +  PQSQKSK TKSKSPP I  LTTTSSP+H+T+K   L+LF    TS   QE+TP
Sbjct: 2   PTTSRVSPQSQKSKPTKSKSPPPIEKLTTTSSPKHKTNKKCVLILFYLAGTSLPCQEETP 61

Query: 225 QPLDAIPINQTKLPSSKTSNQDVFHETSFDPTTLLDEATRESEEGEKEKEVLKEATDDPL 284
           QPLDAIPINQ K PS +TSNQDVFHET + PTTLLD+AT+ESEEG K KEVL+EA DDPL
Sbjct: 62  QPLDAIPINQAKPPSPETSNQDVFHETFYVPTTLLDDATKESEEGGKGKEVLEEAIDDPL 121

BLAST of MELO3C019466 vs. TrEMBL
Match: A0A0A0LAN0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G263250 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 6.2e-28
Identity = 73/138 (52.90%), Postives = 97/138 (70.29%), Query Frame = 1

Query: 1   MERIMLLYCIMMEILVNIGEIICEHVTAWVKHPHGSKLFTCLIEQLCIKACLELEKSLQV 60
           MER+ML+YCIM +ILVNIG+II  H+ A VKHP G++ F+ LIEQLC++ACL LEK  QV
Sbjct: 48  MERVMLVYCIMKKILVNIGKIISNHIIALVKHPRGARPFSYLIEQLCLRACLMLEKLPQV 107

Query: 61  QESDGVCSRPTLHRVITIHKNKAKLRHLKTKQEGQKEVK-MWITKKKKKGKAEEVPLKRK 120
           +  DG+    TLHR+I IHKNKAK++ LKTK EG K VK +     +++ K + +P KRK
Sbjct: 108 EVKDGIWLPSTLHRIIAIHKNKAKIKCLKTK-EGCKVVKEIDDDDVEEEDKKDNIPQKRK 167

Query: 121 RDSKETLPLASSRSSAKK 138
           R  KE   L S ++ + K
Sbjct: 168 RQDKED-DLGSKKAKSSK 183

BLAST of MELO3C019466 vs. TrEMBL
Match: A0A0A0LHW9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G145890 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 7.9e-15
Identity = 50/96 (52.08%), Postives = 64/96 (66.67%), Query Frame = 1

Query: 1  MERIMLLYCIMMEILVNIGEIICEHVTAWVKHPHGSKLFTCLIEQLCIKACLELEKSLQV 60
          MERIM  YCIM EI VNIG+II EH+ AWVK P  ++ F  LI +L +KACL LEK  QV
Sbjct: 1  MERIMFDYCIMKEISVNIGKIISEHILAWVKLPQETRFFLHLINKLRLKACLALEKLPQV 60

Query: 61 QESDGVCSRPTLHRVITIHKNKAKLRHLKTKQEGQK 97
          +  DGV +  TLH +I   +N++K    KT Q+ +K
Sbjct: 61 KVEDGVWTPLTLHCIIRYSQNQSK---DKTPQDPEK 93

BLAST of MELO3C019466 vs. TrEMBL
Match: A0A0A0LAY9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G511970 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.5e-13
Identity = 37/65 (56.92%), Postives = 52/65 (80.00%), Query Frame = 1

Query: 1   MERIMLLYCIMMEILVNIGEIICEHVTAWVKHPHGSKLFTCLIEQLCIKACL-ELEKSLQ 60
           M++IML+YCIM EI VN+GEIIC+H+ AW+KHPH  + F  LIE+LC+KACL + E  ++
Sbjct: 116 MDKIMLIYCIMEEIPVNVGEIICKHILAWIKHPHDGRPFLHLIEKLCLKACLTKKESQIK 175

Query: 61  VQESD 65
           V++ D
Sbjct: 176 VEDVD 180

BLAST of MELO3C019466 vs. TrEMBL
Match: A0A0A0L7I4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G284530 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 6.7e-06
Identity = 42/148 (28.38%), Postives = 76/148 (51.35%), Query Frame = 1

Query: 64  DGVCSRPTLHRVITIHKNKAKLRHLKTKQEGQKEVKM--W---ITKKKKKGKAEEVPLKR 123
           D +C+  +L+ VI +HK+KAK + LKTK   ++ ++M  W   + KKKKK K   +  + 
Sbjct: 3   DEICTITSLNLVINLHKSKAKDKPLKTKNTWKRLLRMMKWKLKMKKKKKKKKKSHLSTRG 62

Query: 124 KRDSKETLPLASSRSSAKKKSTNPLSPIKCKLSKATTSQ---IPTKSKTPTKPQACPQSQ 183
           K  ++        +    K+S +PL  +   L  A T++   +P+ SKTP         +
Sbjct: 63  KAKARRPGQRKEEKKPRDKESKDPLPLVVITLPTAQTTKATILPSPSKTP---------K 122

Query: 184 KSKTTKSKSPPLINDLTTTSSPRHETDK 204
            + TT  ++P   + + T++SP+ +  K
Sbjct: 123 TTTTTNLRTPSFSSQIQTSNSPKIQNVK 141

BLAST of MELO3C019466 vs. NCBI nr
Match: gi|307136315|gb|ADN34138.1| (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 161.0 bits (406), Expect = 3.1e-36
Identity = 83/120 (69.17%), Postives = 94/120 (78.33%), Query Frame = 1

Query: 165 PTKPQACPQSQKSKTTKSKSPPLINDLTTTSSPRHETDKDRALVLFESIKTSFLHQEKTP 224
           PT  +  PQSQKSK TKSKSPP I  LTTTSSP+H+T+K   L+LF    TS   QE+TP
Sbjct: 2   PTTSRVSPQSQKSKPTKSKSPPPIEKLTTTSSPKHKTNKKCVLILFYLAGTSLPCQEETP 61

Query: 225 QPLDAIPINQTKLPSSKTSNQDVFHETSFDPTTLLDEATRESEEGEKEKEVLKEATDDPL 284
           QPLDAIPINQ K PS +TSNQDVFHET + PTTLLD+AT+ESEEG K KEVL+EA DDPL
Sbjct: 62  QPLDAIPINQAKPPSPETSNQDVFHETFYVPTTLLDDATKESEEGGKGKEVLEEAIDDPL 121

BLAST of MELO3C019466 vs. NCBI nr
Match: gi|700202594|gb|KGN57727.1| (hypothetical protein Csa_3G263250 [Cucumis sativus])

HSP 1 Score: 132.9 bits (333), Expect = 9.0e-28
Identity = 73/138 (52.90%), Postives = 97/138 (70.29%), Query Frame = 1

Query: 1   MERIMLLYCIMMEILVNIGEIICEHVTAWVKHPHGSKLFTCLIEQLCIKACLELEKSLQV 60
           MER+ML+YCIM +ILVNIG+II  H+ A VKHP G++ F+ LIEQLC++ACL LEK  QV
Sbjct: 48  MERVMLVYCIMKKILVNIGKIISNHIIALVKHPRGARPFSYLIEQLCLRACLMLEKLPQV 107

Query: 61  QESDGVCSRPTLHRVITIHKNKAKLRHLKTKQEGQKEVK-MWITKKKKKGKAEEVPLKRK 120
           +  DG+    TLHR+I IHKNKAK++ LKTK EG K VK +     +++ K + +P KRK
Sbjct: 108 EVKDGIWLPSTLHRIIAIHKNKAKIKCLKTK-EGCKVVKEIDDDDVEEEDKKDNIPQKRK 167

Query: 121 RDSKETLPLASSRSSAKK 138
           R  KE   L S ++ + K
Sbjct: 168 RQDKED-DLGSKKAKSSK 183

BLAST of MELO3C019466 vs. NCBI nr
Match: gi|659123193|ref|XP_008461541.1| (PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like [Cucumis melo])

HSP 1 Score: 104.4 bits (259), Expect = 3.4e-19
Identity = 70/164 (42.68%), Postives = 92/164 (56.10%), Query Frame = 1

Query: 54  LEKSLQVQESDGVCSRPTLHRVITIHKNKAKLRHLKTKQEGQKEVKMWITKKKKKGKAEE 113
           L+K  QV+  D + S  TLH +I IHKNKAKL+ LKTKQ+G+ +VK    + +++ + ++
Sbjct: 2   LDKLSQVKVKDEILSSSTLHCIIAIHKNKAKLKCLKTKQDGKSKVKTVDDEDEEEKEKDD 61

Query: 114 VPLKRKR------------------DSKETLPLASSRSSAKKKSTNPLSPIKCKLSKATT 173
           VPLKRKR                  DSKE      ++S  KKK TN  S  K K SKAT+
Sbjct: 62  VPLKRKRQGEEEALGSKKIKTFKDKDSKENFLSTFTKSPKKKKLTNLPSLNKYKSSKATS 121

Query: 174 SQIPTKSKTPTKPQACPQSQKSKTTKSKSPPLINDL-TTTSSPR 199
           SQ PTKSKTP  P            KSKSP +  ++  T+SSPR
Sbjct: 122 SQTPTKSKTPPPP----------PKKSKSPTISQEIQNTSSSPR 155

BLAST of MELO3C019466 vs. NCBI nr
Match: gi|700206371|gb|KGN61490.1| (hypothetical protein Csa_2G145890 [Cucumis sativus])

HSP 1 Score: 89.4 bits (220), Expect = 1.1e-14
Identity = 50/96 (52.08%), Postives = 64/96 (66.67%), Query Frame = 1

Query: 1  MERIMLLYCIMMEILVNIGEIICEHVTAWVKHPHGSKLFTCLIEQLCIKACLELEKSLQV 60
          MERIM  YCIM EI VNIG+II EH+ AWVK P  ++ F  LI +L +KACL LEK  QV
Sbjct: 1  MERIMFDYCIMKEISVNIGKIISEHILAWVKLPQETRFFLHLINKLRLKACLALEKLPQV 60

Query: 61 QESDGVCSRPTLHRVITIHKNKAKLRHLKTKQEGQK 97
          +  DGV +  TLH +I   +N++K    KT Q+ +K
Sbjct: 61 KVEDGVWTPLTLHCIIRYSQNQSK---DKTPQDPEK 93

BLAST of MELO3C019466 vs. NCBI nr
Match: gi|700202971|gb|KGN58104.1| (hypothetical protein Csa_3G511970 [Cucumis sativus])

HSP 1 Score: 85.1 bits (209), Expect = 2.1e-13
Identity = 37/65 (56.92%), Postives = 52/65 (80.00%), Query Frame = 1

Query: 1   MERIMLLYCIMMEILVNIGEIICEHVTAWVKHPHGSKLFTCLIEQLCIKACL-ELEKSLQ 60
           M++IML+YCIM EI VN+GEIIC+H+ AW+KHPH  + F  LIE+LC+KACL + E  ++
Sbjct: 116 MDKIMLIYCIMEEIPVNVGEIICKHILAWIKHPHDGRPFLHLIEKLCLKACLTKKESQIK 175

Query: 61  VQESD 65
           V++ D
Sbjct: 176 VEDVD 180

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Y7875_DICDI5.6e-0625.51PH domain-containing protein DDB_G0287875 OS=Dictyostelium discoideum GN=DDB_G02... [more]
Match NameE-valueIdentityDescription
E5GCD9_CUCME2.1e-3669.17Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A0A0A0LAN0_CUCSA6.2e-2852.90Uncharacterized protein OS=Cucumis sativus GN=Csa_3G263250 PE=4 SV=1[more]
A0A0A0LHW9_CUCSA7.9e-1552.08Uncharacterized protein OS=Cucumis sativus GN=Csa_2G145890 PE=4 SV=1[more]
A0A0A0LAY9_CUCSA1.5e-1356.92Uncharacterized protein OS=Cucumis sativus GN=Csa_3G511970 PE=4 SV=1[more]
A0A0A0L7I4_CUCSA6.7e-0628.38Uncharacterized protein OS=Cucumis sativus GN=Csa_3G284530 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|307136315|gb|ADN34138.1|3.1e-3669.17hypothetical protein [Cucumis melo subsp. melo][more]
gi|700202594|gb|KGN57727.1|9.0e-2852.90hypothetical protein Csa_3G263250 [Cucumis sativus][more]
gi|659123193|ref|XP_008461541.1|3.4e-1942.68PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like [Cucumis melo][more]
gi|700206371|gb|KGN61490.1|1.1e-1452.08hypothetical protein Csa_2G145890 [Cucumis sativus][more]
gi|700202971|gb|KGN58104.1|2.1e-1356.92hypothetical protein Csa_3G511970 [Cucumis sativus][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C019466T1MELO3C019466T1mRNA


Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 259..279
scor

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None