MELO3C019465 (gene) Melon (DHL92) v3.5.1

NameMELO3C019465
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionHomeobox protein SIX3
Locationchr6 : 10121147 .. 10121371 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGGGCGGGAAGAGCTTCTAAGCAAAGTGGACAAGGTACCTGTCCCAGCAGAGAATAGCAAAGGAAAAGAAAAAGTGAAGACTTTTGAGGAATACTATGAAGAGGTTGAGAAAGAGATTGAAAAGTTAAGTCCCTTGGAGGACGAAGTACCAAACCCTAAGAAAAAGAGGAAGGTCACCATGAAAAAGAAGGCTTTGAAGGAACAATTTAAGAAGAGGTGA

mRNA sequence

ATGAAGGGGCGGGAAGAGCTTCTAAGCAAAGTGGACAAGGTACCTGTCCCAGCAGAGAATAGCAAAGGAAAAGAAAAAGTGAAGACTTTTGAGGAATACTATGAAGAGGTTGAGAAAGAGATTGAAAAGTTAAGTCCCTTGGAGGACGAAGTACCAAACCCTAAGAAAAAGAGGAAGGTCACCATGAAAAAGAAGGCTTTGAAGGAACAATTTAAGAAGAGGTGA

Coding sequence (CDS)

ATGAAGGGGCGGGAAGAGCTTCTAAGCAAAGTGGACAAGGTACCTGTCCCAGCAGAGAATAGCAAAGGAAAAGAAAAAGTGAAGACTTTTGAGGAATACTATGAAGAGGTTGAGAAAGAGATTGAAAAGTTAAGTCCCTTGGAGGACGAAGTACCAAACCCTAAGAAAAAGAGGAAGGTCACCATGAAAAAGAAGGCTTTGAAGGAACAATTTAAGAAGAGGTGA

Protein sequence

MKGREELLSKVDKVPVPAENSKGKEKVKTFEEYYEEVEKEIEKLSPLEDEVPNPKKKRKVTMKKKALKEQFKKR*
BLAST of MELO3C019465 vs. TrEMBL
Match: A0A0A0K7W9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G290550 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 5.0e-09
Identity = 37/74 (50.00%), Postives = 52/74 (70.27%), Query Frame = 1

Query: 1  MKGREELLSKVDKVPVPAENSKGKEKVKTFEEYYEEVEKEIEKLSPLEDEVPNPKKKRKV 60
          ++ ++ELL+K+D+ P+  +  KGK +    EE  EE E+++E LSPLEDEV  P KK KV
Sbjct: 17 LREQKELLNKIDQAPISTK--KGKVRKTPSEEICEEFERKLEDLSPLEDEVVKPLKK-KV 76

Query: 61 TMKKKALKEQFKKR 75
          T+KK  LK+QF KR
Sbjct: 77 TVKKSVLKKQFDKR 87

BLAST of MELO3C019465 vs. TrEMBL
Match: A0A0A0K4R7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G298750 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 6.1e-07
Identity = 29/44 (65.91%), Postives = 35/44 (79.55%), Query Frame = 1

Query: 31 EEYYEEVEKEIEKLSPLEDEVPNPKKKRKVTMKKKALKEQFKKR 75
          EE +EE E+++E LSPLEDEV  P KK+KVT+ KK LKEQF KR
Sbjct: 6  EEIFEEFERKLEDLSPLEDEVVKPLKKKKVTVNKKVLKEQFVKR 49

BLAST of MELO3C019465 vs. NCBI nr
Match: gi|659083323|ref|XP_008442290.1| (PREDICTED: stress response protein NST1-like [Cucumis melo])

HSP 1 Score: 86.7 bits (213), Expect = 1.9e-14
Identity = 46/71 (64.79%), Postives = 55/71 (77.46%), Query Frame = 1

Query: 5   EELLSKVDKVPVPAENSKGKEKVKTFEEYYEEVEKEIEKLSPLEDE-VPNPKKKRKVTMK 64
           EELL+KVDK+ +  E  KGKEK KTFEE+Y+E EKEI++ SPLED  V  P KKR VTMK
Sbjct: 50  EELLNKVDKLALSVE--KGKEKEKTFEEFYKEFEKEIDEFSPLEDNVVERPAKKRNVTMK 109

Query: 65  KKALKEQFKKR 75
           KK L++QF KR
Sbjct: 110 KKVLRDQFAKR 118

BLAST of MELO3C019465 vs. NCBI nr
Match: gi|659090014|ref|XP_008445787.1| (PREDICTED: axoneme-associated protein mst101(3)-like [Cucumis melo])

HSP 1 Score: 82.8 bits (203), Expect = 2.8e-13
Identity = 44/74 (59.46%), Postives = 54/74 (72.97%), Query Frame = 1

Query: 1   MKGREELLSKVDKVPVPAENSKGKEKVKTFEEYYEEVEKEIEKLSPLEDEVPNPKKKRKV 60
           ++ REELL KVD V + AE  K +EK   FE +YEE EKEI+KL PLE++V  P KKR  
Sbjct: 98  LREREELLGKVDNVALSAEKDKCEEK--NFEVHYEEFEKEIDKLCPLEEKVIRPAKKRTF 157

Query: 61  TMKKKALKEQFKKR 75
           TMKKKAL++QF KR
Sbjct: 158 TMKKKALRKQFAKR 169

BLAST of MELO3C019465 vs. NCBI nr
Match: gi|700189199|gb|KGN44432.1| (hypothetical protein Csa_7G290550 [Cucumis sativus])

HSP 1 Score: 68.2 bits (165), Expect = 7.1e-09
Identity = 37/74 (50.00%), Postives = 52/74 (70.27%), Query Frame = 1

Query: 1  MKGREELLSKVDKVPVPAENSKGKEKVKTFEEYYEEVEKEIEKLSPLEDEVPNPKKKRKV 60
          ++ ++ELL+K+D+ P+  +  KGK +    EE  EE E+++E LSPLEDEV  P KK KV
Sbjct: 17 LREQKELLNKIDQAPISTK--KGKVRKTPSEEICEEFERKLEDLSPLEDEVVKPLKK-KV 76

Query: 61 TMKKKALKEQFKKR 75
          T+KK  LK+QF KR
Sbjct: 77 TVKKSVLKKQFDKR 87

BLAST of MELO3C019465 vs. NCBI nr
Match: gi|659130998|ref|XP_008465464.1| (PREDICTED: DNA ligase 1-like [Cucumis melo])

HSP 1 Score: 63.2 bits (152), Expect = 2.3e-07
Identity = 36/73 (49.32%), Postives = 49/73 (67.12%), Query Frame = 1

Query: 1   MKGREELLSKVDKVPVPAENSKGKEKVKTFEEYYEEVEKEIEKLSPLEDEVPNPKKKRKV 60
           ++ +EELL+KVDKV +  E  K +   KTFEE+ EE +KEIE+LSPLEDEV     K+K 
Sbjct: 66  LREKEELLNKVDKVALSVEKRKEE---KTFEEHCEEFKKEIEELSPLEDEVVEKSSKKKR 125

Query: 61  TMKKKALKEQFKK 74
            M+ +  K + KK
Sbjct: 126 IMEGQDDKRKEKK 135

BLAST of MELO3C019465 vs. NCBI nr
Match: gi|700189225|gb|KGN44458.1| (hypothetical protein Csa_7G298750 [Cucumis sativus])

HSP 1 Score: 61.2 bits (147), Expect = 8.7e-07
Identity = 29/44 (65.91%), Postives = 35/44 (79.55%), Query Frame = 1

Query: 31 EEYYEEVEKEIEKLSPLEDEVPNPKKKRKVTMKKKALKEQFKKR 75
          EE +EE E+++E LSPLEDEV  P KK+KVT+ KK LKEQF KR
Sbjct: 6  EEIFEEFERKLEDLSPLEDEVVKPLKKKKVTVNKKVLKEQFVKR 49

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0K7W9_CUCSA5.0e-0950.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G290550 PE=4 SV=1[more]
A0A0A0K4R7_CUCSA6.1e-0765.91Uncharacterized protein OS=Cucumis sativus GN=Csa_7G298750 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|659083323|ref|XP_008442290.1|1.9e-1464.79PREDICTED: stress response protein NST1-like [Cucumis melo][more]
gi|659090014|ref|XP_008445787.1|2.8e-1359.46PREDICTED: axoneme-associated protein mst101(3)-like [Cucumis melo][more]
gi|700189199|gb|KGN44432.1|7.1e-0950.00hypothetical protein Csa_7G290550 [Cucumis sativus][more]
gi|659130998|ref|XP_008465464.1|2.3e-0749.32PREDICTED: DNA ligase 1-like [Cucumis melo][more]
gi|700189225|gb|KGN44458.1|8.7e-0765.91hypothetical protein Csa_7G298750 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C019465T1MELO3C019465T1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None