MELO3C019453 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C019453
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Serine/threonine protein kinase
Location	chr6 : 9868394 .. 9868621 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTGACTGTGTGTATGCTCAGAGAGGAATATGTTGTGGGAAAGAGATTGAGAATATTCCAAGCTTTGCATCTACAAGAGCACCATCAAATCATTCTTCTAATCCACTATTTGTTAAGGGAGTGGCACGAAATGGTTCTTTCCCCCTTTGCCGAGAAGATGACAAAGATGGGCATTACATCTTTGCACTTGGAGAAAATTTAACTTCTCACTGTAAATACACTTGA

mRNA sequence

ATGGGTGACTGTGTGTATGCTCAGAGAGGAATATGTTGTGGGAAAGAGATTGAGAATATTCCAAGCTTTGCATCTACAAGAGCACCATCAAATCATTCTTCTAATCCACTATTTGTTAAGGGAGTGGCACGAAATGGTTCTTTCCCCCTTTGCCGAGAAGATGACAAAGATGGGCATTACATCTTTGCACTTGGAGAAAATTTAACTTCTCACTGTAAATACACTTGA

Coding sequence (CDS)

ATGGGTGACTGTGTGTATGCTCAGAGAGGAATATGTTGTGGGAAAGAGATTGAGAATATTCCAAGCTTTGCATCTACAAGAGCACCATCAAATCATTCTTCTAATCCACTATTTGTTAAGGGAGTGGCACGAAATGGTTCTTTCCCCCTTTGCCGAGAAGATGACAAAGATGGGCATTACATCTTTGCACTTGGAGAAAATTTAACTTCTCACTGTAAATACACTTGA

Protein sequence

MGDCVYAQRGICCGKEIENIPSFASTRAPSNHSSNPLFVKGVARNGSFPLCREDDKDGHYIFALGENLTSHCKYT*

Homology

[Close]

BLAST of MELO3C019453 vs. Swiss-Prot
Match: AFC2_ARATH (Serine/threonine-protein kinase AFC2 OS=Arabidopsis thaliana GN=AFC2 PE=1 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 8.8e-15
Identity = 45/67 (67.16%), Postives = 51/67 (76.12%), Query Frame = 1


Query: 7  AQRGICCGKEIENIPSFASTRAPSNHSSNPLFVKGVARNGSFPLCREDDKDGHYIFALGE 66
          AQ G+ CG+EI NI SFAS+ APS++SS+ L VKGVARNGS P  REDDKDGHYIF LG+
Sbjct: 35 AQVGMFCGQEIGNISSFASSGAPSDNSSS-LCVKGVARNGS-PPWREDDKDGHYIFELGD 94

Query: 67 NLTSHCK 74
          +LT   K
Sbjct: 95 DLTPRYK 99

[Close]

BLAST of MELO3C019453 vs. TrEMBL
Match: A0A0A0LTN5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G048950 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 6.1e-23
Identity = 57/67 (85.07%), Postives = 60/67 (89.55%), Query Frame = 1


Query: 7   AQRGICCGKEIENIPSFASTRAPSNHSSNPLFVKGVARNGSFPLCREDDKDGHYIFALGE 66
           AQ GICCG+EI NIPSFASTRAPS+HSSNPLFVKGVARNGS P  REDDKDGHY+FALGE
Sbjct: 35  AQVGICCGQEIANIPSFASTRAPSDHSSNPLFVKGVARNGS-PPWREDDKDGHYMFALGE 94

Query: 67  NLTSHCK 74
           NLTS  K
Sbjct: 95  NLTSRYK 100

[Close]

BLAST of MELO3C019453 vs. TrEMBL
Match: V4VKG7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020223mg PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 7.3e-16
Identity = 48/72 (66.67%), Postives = 56/72 (77.78%), Query Frame = 1


Query: 3  DCVYAQRGICCGKEIENIPSFASTRAPSNH-SSNPLFVKGVARNGSFPLCREDDKDGHYI 62
          D   AQ G+ CG+E+ N+ SFA  RAPS+H +S+ LFVKGVARNGS P  REDDKDGHY+
Sbjct: 27 DVPQAQVGLFCGQEVGNVTSFAPPRAPSDHVTSSSLFVKGVARNGS-PPWREDDKDGHYM 86

Query: 63 FALGENLTSHCK 74
          FALGENLTS  K
Sbjct: 87 FALGENLTSRYK 97

[Close]

BLAST of MELO3C019453 vs. TrEMBL
Match: V4SZD0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020223mg PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 1.2e-15
Identity = 47/68 (69.12%), Postives = 55/68 (80.88%), Query Frame = 1


Query: 7   AQRGICCGKEIENIPSFASTRAPSNH-SSNPLFVKGVARNGSFPLCREDDKDGHYIFALG 66
           AQ G+ CG+E+ N+ SFA  RAPS+H +S+ LFVKGVARNGS P  REDDKDGHY+FALG
Sbjct: 34  AQVGLFCGQEVGNVTSFAPPRAPSDHVTSSSLFVKGVARNGS-PPWREDDKDGHYMFALG 93

Query: 67  ENLTSHCK 74
           ENLTS  K
Sbjct: 94  ENLTSRYK 100

[Close]

BLAST of MELO3C019453 vs. TrEMBL
Match: V4TTI1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020223mg PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 1.2e-15
Identity = 47/68 (69.12%), Postives = 55/68 (80.88%), Query Frame = 1


Query: 7   AQRGICCGKEIENIPSFASTRAPSNH-SSNPLFVKGVARNGSFPLCREDDKDGHYIFALG 66
           AQ G+ CG+E+ N+ SFA  RAPS+H +S+ LFVKGVARNGS P  REDDKDGHY+FALG
Sbjct: 34  AQVGLFCGQEVGNVTSFAPPRAPSDHVTSSSLFVKGVARNGS-PPWREDDKDGHYMFALG 93

Query: 67  ENLTSHCK 74
           ENLTS  K
Sbjct: 94  ENLTSRYK 100

[Close]

BLAST of MELO3C019453 vs. TrEMBL
Match: A0A067FQ01_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0139731mg PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 1.2e-15
Identity = 47/68 (69.12%), Postives = 55/68 (80.88%), Query Frame = 1


Query: 7  AQRGICCGKEIENIPSFASTRAPSNH-SSNPLFVKGVARNGSFPLCREDDKDGHYIFALG 66
          AQ G+ CG+E+ N+ SFA  RAPS+H +S+ LFVKGVARNGS P  REDDKDGHY+FALG
Sbjct: 1  AQVGLFCGQEVGNVTSFAPPRAPSDHVTSSSLFVKGVARNGS-PPWREDDKDGHYMFALG 60

Query: 67 ENLTSHCK 74
          ENLTS  K
Sbjct: 61 ENLTSRYK 67

[Close]

BLAST of MELO3C019453 vs. TAIR10
Match: AT4G24740.1 (AT4G24740.1 FUS3-complementing gene 2)

HSP 1 Score: 80.5 bits (197), Expect = 5.0e-16
Identity = 45/67 (67.16%), Postives = 51/67 (76.12%), Query Frame = 1


Query: 7  AQRGICCGKEIENIPSFASTRAPSNHSSNPLFVKGVARNGSFPLCREDDKDGHYIFALGE 66
          AQ G+ CG+EI NI SFAS+ APS++SS+ L VKGVARNGS P  REDDKDGHYIF LG+
Sbjct: 35 AQVGMFCGQEIGNISSFASSGAPSDNSSS-LCVKGVARNGS-PPWREDDKDGHYIFELGD 94

Query: 67 NLTSHCK 74
          +LT   K
Sbjct: 95 DLTPRYK 99

[Close]

BLAST of MELO3C019453 vs. NCBI nr
Match: gi|449469580|ref|XP_004152497.1| (PREDICTED: serine/threonine-protein kinase AFC2 isoform X1 [Cucumis sativus])

HSP 1 Score: 114.4 bits (285), Expect = 8.8e-23
Identity = 57/67 (85.07%), Postives = 60/67 (89.55%), Query Frame = 1


Query: 7   AQRGICCGKEIENIPSFASTRAPSNHSSNPLFVKGVARNGSFPLCREDDKDGHYIFALGE 66
           AQ GICCG+EI NIPSFASTRAPS+HSSNPLFVKGVARNGS P  REDDKDGHY+FALGE
Sbjct: 35  AQVGICCGQEIANIPSFASTRAPSDHSSNPLFVKGVARNGS-PPWREDDKDGHYMFALGE 94

Query: 67  NLTSHCK 74
           NLTS  K
Sbjct: 95  NLTSRYK 100

[Close]

BLAST of MELO3C019453 vs. NCBI nr
Match: gi|659067367|ref|XP_008439081.1| (PREDICTED: serine/threonine-protein kinase AFC2 isoform X1 [Cucumis melo])

HSP 1 Score: 113.2 bits (282), Expect = 2.0e-22
Identity = 56/67 (83.58%), Postives = 60/67 (89.55%), Query Frame = 1


Query: 7   AQRGICCGKEIENIPSFASTRAPSNHSSNPLFVKGVARNGSFPLCREDDKDGHYIFALGE 66
           AQ GICCG+EI NIPSFASTRAPS+HSSNPLFVKGVARNGS P  REDDKDGHY+FALG+
Sbjct: 35  AQVGICCGQEIANIPSFASTRAPSDHSSNPLFVKGVARNGS-PPWREDDKDGHYMFALGD 94

Query: 67  NLTSHCK 74
           NLTS  K
Sbjct: 95  NLTSRYK 100

[Close]

BLAST of MELO3C019453 vs. NCBI nr
Match: gi|567894932|ref|XP_006439954.1| (hypothetical protein CICLE_v10020223mg [Citrus clementina])

HSP 1 Score: 90.9 bits (224), Expect = 1.0e-15
Identity = 48/72 (66.67%), Postives = 56/72 (77.78%), Query Frame = 1


Query: 3  DCVYAQRGICCGKEIENIPSFASTRAPSNH-SSNPLFVKGVARNGSFPLCREDDKDGHYI 62
          D   AQ G+ CG+E+ N+ SFA  RAPS+H +S+ LFVKGVARNGS P  REDDKDGHY+
Sbjct: 27 DVPQAQVGLFCGQEVGNVTSFAPPRAPSDHVTSSSLFVKGVARNGS-PPWREDDKDGHYM 86

Query: 63 FALGENLTSHCK 74
          FALGENLTS  K
Sbjct: 87 FALGENLTSRYK 97

[Close]

BLAST of MELO3C019453 vs. NCBI nr
Match: gi|641850580|gb|KDO69452.1| (hypothetical protein CISIN_1g0139731mg, partial [Citrus sinensis])

HSP 1 Score: 90.1 bits (222), Expect = 1.8e-15
Identity = 47/68 (69.12%), Postives = 55/68 (80.88%), Query Frame = 1


Query: 7  AQRGICCGKEIENIPSFASTRAPSNH-SSNPLFVKGVARNGSFPLCREDDKDGHYIFALG 66
          AQ G+ CG+E+ N+ SFA  RAPS+H +S+ LFVKGVARNGS P  REDDKDGHY+FALG
Sbjct: 1  AQVGLFCGQEVGNVTSFAPPRAPSDHVTSSSLFVKGVARNGS-PPWREDDKDGHYMFALG 60

Query: 67 ENLTSHCK 74
          ENLTS  K
Sbjct: 61 ENLTSRYK 67

[Close]

BLAST of MELO3C019453 vs. NCBI nr
Match: gi|567894930|ref|XP_006439953.1| (hypothetical protein CICLE_v10020223mg [Citrus clementina])

HSP 1 Score: 90.1 bits (222), Expect = 1.8e-15
Identity = 47/68 (69.12%), Postives = 55/68 (80.88%), Query Frame = 1


Query: 7   AQRGICCGKEIENIPSFASTRAPSNH-SSNPLFVKGVARNGSFPLCREDDKDGHYIFALG 66
           AQ G+ CG+E+ N+ SFA  RAPS+H +S+ LFVKGVARNGS P  REDDKDGHY+FALG
Sbjct: 34  AQVGLFCGQEVGNVTSFAPPRAPSDHVTSSSLFVKGVARNGS-PPWREDDKDGHYMFALG 93

Query: 67  ENLTSHCK 74
           ENLTS  K
Sbjct: 94  ENLTSRYK 100

The following BLAST results are available for this feature:

BLAST of MELO3C019453 vs. Swiss-Prot


Match Name	E-value	Identity	Description
AFC2_ARATH	8.8e-15	67.16	Serine/threonine-protein kinase AFC2 OS=Arabidopsis thaliana GN=AFC2 PE=1 SV=1	[more]

BLAST of MELO3C019453 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LTN5_CUCSA	6.1e-23	85.07	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G048950 PE=4 SV=1	[more]
V4VKG7_9ROSI	7.3e-16	66.67	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020223mg PE=4 SV=1	[more]
V4SZD0_9ROSI	1.2e-15	69.12	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020223mg PE=4 SV=1	[more]
V4TTI1_9ROSI	1.2e-15	69.12	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020223mg PE=4 SV=1	[more]
A0A067FQ01_CITSI	1.2e-15	69.12	Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0139731mg PE=4 ...	[more]

BLAST of MELO3C019453 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G24740.1	5.0e-16	67.16	FUS3-complementing gene 2	[more]

BLAST of MELO3C019453 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449469580\|ref\|XP_004152497.1\|	8.8e-23	85.07	PREDICTED: serine/threonine-protein kinase AFC2 isoform X1 [Cucumis sativus]	[more]
gi\|659067367\|ref\|XP_008439081.1\|	2.0e-22	83.58	PREDICTED: serine/threonine-protein kinase AFC2 isoform X1 [Cucumis melo]	[more]
gi\|567894932\|ref\|XP_006439954.1\|	1.0e-15	66.67	hypothetical protein CICLE_v10020223mg [Citrus clementina]	[more]
gi\|641850580\|gb\|KDO69452.1\|	1.8e-15	69.12	hypothetical protein CISIN_1g0139731mg, partial [Citrus sinensis]	[more]
gi\|567894930\|ref\|XP_006439953.1\|	1.8e-15	69.12	hypothetical protein CICLE_v10020223mg [Citrus clementina]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006397	mRNA processing
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0045727	positive regulation of translation
biological_process	GO:0046777	protein autophosphorylation
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0020037	heme binding
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
molecular_function	GO:0004672	protein kinase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C019453T1	MELO3C019453T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR24058	DUAL SPECIFICITY PROTEIN KINASE	coord: 7..70 score: 1.2
None	No IPR available	PANTHER	PTHR24058:SF58	SUBFAMILY NOT NAMED	coord: 7..70 score: 1.2

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C019453	Wild cucumber (PI 183967)	cpimeB241
MELO3C019453	Cucumber (Chinese Long) v2	cumeB166
MELO3C019453	Watermelon (Charleston Gray)	mewcgB427
MELO3C019453	Watermelon (97103) v1	mewmB461
MELO3C019453	Cucurbita pepo (Zucchini)	cpemeB192
MELO3C019453	Cucurbita pepo (Zucchini)	cpemeB412
MELO3C019453	Bottle gourd (USVL1VR-Ls)	lsimeB368
MELO3C019453	Cucumber (Gy14) v2	cgybmeB210
MELO3C019453	Silver-seed gourd	carmeB0041
MELO3C019453	Silver-seed gourd	carmeB0651
MELO3C019453	Cucumber (Chinese Long) v3	cucmeB247
MELO3C019453	Watermelon (97103) v2	mewmbB434
MELO3C019453	Wax gourd	mewgoB530
MELO3C019453	Cucumber (Gy14) v1	cgymeB002
MELO3C019453	Cucurbita maxima (Rimu)	cmameB298
MELO3C019453	Cucurbita maxima (Rimu)	cmameB691
MELO3C019453	Cucurbita moschata (Rifu)	cmomeB290
MELO3C019453	Cucurbita moschata (Rifu)	cmomeB683