MELO3C019449 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C019449
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionATP-dependent DNA helicase Q-like 4A
Locationchr6 : 9817759 .. 9822019 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CGAATTACATTAAGGTTAAGTATTTCTCCTAACAGTTACTGTTTGTGTGCAATTTCTATGACAATTTACAAGTCATAAGTGAATGCAGTATTCATATTTATGGTATATGTATTACCCTTGGAATGATGTGTGATCTAGCTATCATAATCCATAATAACCCAATAGGTTTGCTGTTGTGTTGAAGTCATACTATTGGTCCGAACTAATTCCAAAAGCAAAAATGGAAAGGCTTGTCCTGCTGCCGCTCTTTTCTGTTCTCTATATTGATTGTCTTTTAACTCATCTATAAGCTGTATTGTTCTTGCACTACATCTTTGCTTAGCACCTGAGACTTGGCAGCTAATTTGTTTTCTCTGGTACTTGACACACTTTCCAGGTTTCCATCAATTACAAAAACAAATAAACTGAGCAAATTTGAAATGACTCCAGCTAAAGGTTCTTTGGTATTTGGAAAAATGTATCCCAATATCGACACTCCTGCCCAGCCTCAATCTGAAGTTGATGTGGTAATTTATAAATCCTTTGCATAGCATTAAGCAGCATGGTTTTTTTTCTTGATGTTTGTGCTGTACAGTTCGTTACTTGGTTTGTTCTCAAGTGGGAAAATGATTTTGTTTTCTTACTGCAGCAACTCTCAGCAAAATTATATTCCTCTTTGCGGATGCTTCGAACTAATCTCGTTAAAGAGGCTGCAGATGGTGTTATGGCGTATCATATATTTGGGTAGGTTTTTTTCACTTTGTTAGCTCCTTTAAAGATGTCTCTCTCTCCCTCTCCTTCATTTTTCTAAAAGAAAACTTGGTGACTATAGTCTAAAAGTAATAACAAGAGAAAGTTGGAGAAGATTTCCAATCCTGGTTATTGGAAACCTCAGATAGGTTCTCTAATTTTGTGTTTCAGGATAGAACCAAAGAGATCTTCTTTGATGTCCGAAAATAAACCACAAAAAATTATTTGACGTCATACACTTGGGGCACTTAAATGTTTCTAGGATTCTTCTACTTTTCTTCTCAAATGTCCCAAACACTTTTTTACTCTCGAGTCAATGATTAATGAGGTCCCTCCCTATCGATGAAGATAATGAGATAAATGCTGAATGTGGCTCATCTCTTCCTTTGCCACCTCACACAAATCATATCTCAAAGACATCAATGTGCGTTTCTGTATGTTCTGACTAATTATCTGTCACTTTTGCTTCTATTCACCATTTCTTAGATGAGGTTGGATCTATTGTTGATATCTAGGTATATAAGTGGGTGAAGATTATTATCGTGTTTAGTGATCATTGTTTGCTGCTTCTGTAAGTAGCATCAAACTTCTTTTAGGAGAAGTGCAAGAAAAAAGATTCGTGTAACTACTAAGTGTTTTGTACTTAGGAAGACATACTCAACTCATATGGAGAGTTGGTTGGTCTGTAGCACGGACTTCTATGGTAAGTTGGCCAGTAGTTGCAGGGAGGAGAACAAGAAGAGATGAGTAGGTCATGGGAGGAAAGAGCGCATTGTGGATGAAAAAGATATAAGATGACTCGTCACTATACAGATGTTAAATGGTAAGCACAGGCAAGCATTGTAACTGCAAAATACTAATAACAAGAGAGCAAGTAAAGACTCATAAAGTTGGTAACCTAGTTTGGTGAAATCCACCTACGTTTGGGGTGTAGTGTGCCTAGACAAGATAATCCATTAGTATTAAAGAATTACAATTACAATGCCGTACTTATTTGCAATACAATGACTATTACAGCTACTCACATGGAGCCCACTCGCATATCACCTAGATTACCCCTAGATCTGAGATTCCCTCTCAATTAAACTTAGGCTCCCCTAAGTATACGAATATTAGTGAATGATCACTTAGATTCTCCCTCGGTGTGAGACTTACTCTCACCAAGACTATTATTTTTCCTCCTTCAAATGCAACTCCATTTGATGAGCTTAGGCTCCCCTTGAGTTTGATAAATACTTCTCAAGTTGATGAAGAACAAGTCAACAAGATCTAGAGAATCACTCAAGATCGATAATGACAAAAGCTTTACGATCTAATGAAACGACACACGTGTTCTTCGGCACAAACACAACACAATGGCAGGAATATTCTTAAAAAACGACCGACCCTAAAATTGAACAAGATGCTATATATGTTTGTGTGAATATATATGAGTAGCTTTGAGAATATCTTTTTGGAAGAATAAATCAACTCTGTAAGGAAAAATACAACATATCACGAAGTGTACGAAATACTACTAATATACAAGGAAAAAAACTTCTGCAGAATGTATTGCCTTTCACGTTAGAGATATTGAAAAAGTTATAACATATCGAGAGACATGTTACAAAAACGCCAATCATATTTGCAATAACAAACACCGTAACAAAGGACATGGTAGTAGAGTAGGGGCATGTTTGGAAGCAATTTCAGAGTGACTAAAATCACTTTTTACATGTCAAAAATCTTTCTTTTAGTCTAATGGTTTTTAACTCTAGCTTTTTTTCCTCTCAATTTATTTTTTACTCTTTTTCTAACGTTCTGCTCTTGATTTTCCCCCCCTCACTCTTAAGTTTTTCTTTCTTTAAAGTTATTCTCCAAAATTTTTTGTATCTTTCTAGCTTTATTTTACTTTCTTCTTATTTTTATTGTCTCTGCTAAATTTCTTGTCAGACTAACATTTATTATTATTTTTGAAAATTTTCTCTAGCTCTCTATTTTGTCTCTAGAAACTTTAATATTTCTCTCAATAAAGTTCTTTGCCTCTAATTTTTAGTGATTTGATGATTCTAAAACTACCTTTGGAAACAAACATTAATCACCTGAAAATCTTTTAAATTGAATTTAAATTATTTATACTATGAAACTTTAACATGATTTGTCACAATCTTTTAAATTGAATTTAAATTATATATACTATGAAACTTTAACATGATTTGTCACAATCTTTTAAATTGAATTTAAATTATATATACTATGAAACTTTAACATGATTTGTCACACTTTTACAAAACTAATTATAGTTAAATTATTTAGCTCAAAACACCGATTCTAAAAATTTAATCTCAAACATTCCCTTCAAGTCATTGTAATAAAAATAATAATAATAATAAAAAGCATTGAAAATCACTCTTAAAAAGCTTAGAACAAACATTAAAATGTTTATAAGAAAATCACTTGTTAATAAATGAAATTTGTTAAAATTACTATTTCTAAAAACACTCCCAAGTATGTCTTAAGAGTCCTACAATTTGTAAATAAATACACTTTTAATTGTTTTAGAGTTGGTGATCTATGTTAGTACTTTTTATTTATGACATTTGATGATGTTGAGTATGTCATTTTTTAAAATGGCCGTCCTGTAATTTTGTACCTTCTTTTTATATGATATATTTTTTTTTCGTTTTGAAATGCAGTTAGGCTGCATCATGGTTTCGTTATGAGATTGTTTTTTTCCTTTTTAATTTCTATTTACGTCCAAATTTCTTCGTGAAGTGCTGATTAGTTGATTACATTTCTTCTCTCAATACAGAAATGCTACATTGCAACAGATAAGCCGAAGAGTTCCCAGATCGAAAGAAGAATTACTTGATATCAACGGCATTGGCAAGTAAGTTTCCAGGCTTCTTGTCTTAAAAAATTTAATTTACTCTATAGTACAAAACATTTGACAAAATAATCTCCTTAATTTAGGGCTAAGGTAAGCAAGTACGGTGACCGTATTTTGGAAACCATAGAATCAACCATCAATGAATTCTATGGAGCAGGGAAAAATGGAAGCAACAGTAATGACAGTAACGATTCTGGAAAGAGAAGAAGAGGTGGAAATAAAGATAAAGATGAATATTTAGATGAAAATGACGCCACTAAAAGCTTTGATAGATCAAAGAAAAGAGCAACAAATATTCAGAGCATAGATCCTAAAGTCCATAATTCTTCTAGGCCGGAACATCCAGATCAATTCTTTGACAGTGAGCTGGATTTCGATGACAGTCATTATGAAATTCGTGACTTGGAGCTAAACAATAACCTGGATCATGGTAATGATGGAAGGGTGTTACCTTCATGGTCATAACAGAAATTCTGGTTGGTAACTGTATAGTTTTAGATGAAAAATTTATCATTGCTCAGGTTGTTTTGAATGGTATATAACTGAAGGTGAAGCCATCCTGGGGGAAGGTAAAGGGAGTTTTGATTTATACAAATGGTGCTTGAAACTTGGAACAGAGCAATCCAATTGAAATGGAAACCAATCTTTCACTGCTACAAATAC

mRNA sequence

CGAATTACATTAAGGTTTCCATCAATTACAAAAACAAATAAACTGAGCAAATTTGAAATGACTCCAGCTAAAGGTTCTTTGGTATTTGGAAAAATGTATCCCAATATCGACACTCCTGCCCAGCCTCAATCTGAAGTTGATGTGCAACTCTCAGCAAAATTATATTCCTCTTTGCGGATGCTTCGAACTAATCTCGTTAAAGAGGCTGCAGATGGTGTTATGGCGTATCATATATTTGGAAATGCTACATTGCAACAGATAAGCCGAAGAGTTCCCAGATCGAAAGAAGAATTACTTGATATCAACGGCATTGGCAAGGCTAAGGTAAGCAAGTACGGTGACCGTATTTTGGAAACCATAGAATCAACCATCAATGAATTCTATGGAGCAGGGAAAAATGGAAGCAACAGTAATGACAGTAACGATTCTGGAAAGAGAAGAAGAGGTGGAAATAAAGATAAAGATGAATATTTAGATGAAAATGACGCCACTAAAAGCTTTGATAGATCAAAGAAAAGAGCAACAAATATTCAGAGCATAGATCCTAAAGTCCATAATTCTTCTAGGCCGGAACATCCAGATCAATTCTTTGACAGTGAGCTGGATTTCGATGACAGTCATTATGAAATTCGTGACTTGGAGCTAAACAATAACCTGGATCATGGTTGTTTTGAATGGTATATAACTGAAGGTGAAGCCATCCTGGGGGAAGGTAAAGGGAGTTTTGATTTATACAAATGGTGCTTGAAACTTGGAACAGAGCAATCCAATTGAAATGGAAACCAATCTTTCACTGCTACAAATAC

Coding sequence (CDS)

ATGACTCCAGCTAAAGGTTCTTTGGTATTTGGAAAAATGTATCCCAATATCGACACTCCTGCCCAGCCTCAATCTGAAGTTGATGTGCAACTCTCAGCAAAATTATATTCCTCTTTGCGGATGCTTCGAACTAATCTCGTTAAAGAGGCTGCAGATGGTGTTATGGCGTATCATATATTTGGAAATGCTACATTGCAACAGATAAGCCGAAGAGTTCCCAGATCGAAAGAAGAATTACTTGATATCAACGGCATTGGCAAGGCTAAGGTAAGCAAGTACGGTGACCGTATTTTGGAAACCATAGAATCAACCATCAATGAATTCTATGGAGCAGGGAAAAATGGAAGCAACAGTAATGACAGTAACGATTCTGGAAAGAGAAGAAGAGGTGGAAATAAAGATAAAGATGAATATTTAGATGAAAATGACGCCACTAAAAGCTTTGATAGATCAAAGAAAAGAGCAACAAATATTCAGAGCATAGATCCTAAAGTCCATAATTCTTCTAGGCCGGAACATCCAGATCAATTCTTTGACAGTGAGCTGGATTTCGATGACAGTCATTATGAAATTCGTGACTTGGAGCTAAACAATAACCTGGATCATGGTTGTTTTGAATGGTATATAACTGAAGGTGAAGCCATCCTGGGGGAAGGTAAAGGGAGTTTTGATTTATACAAATGGTGCTTGAAACTTGGAACAGAGCAATCCAATTGA

Protein sequence

MTPAKGSLVFGKMYPNIDTPAQPQSEVDVQLSAKLYSSLRMLRTNLVKEAADGVMAYHIFGNATLQQISRRVPRSKEELLDINGIGKAKVSKYGDRILETIESTINEFYGAGKNGSNSNDSNDSGKRRRGGNKDKDEYLDENDATKSFDRSKKRATNIQSIDPKVHNSSRPEHPDQFFDSELDFDDSHYEIRDLELNNNLDHGCFEWYITEGEAILGEGKGSFDLYKWCLKLGTEQSN*
Homology
[Close]
BLAST of MELO3C019449 vs. Swiss-Prot
Match: RQL4A_ARATH (ATP-dependent DNA helicase Q-like 4A OS=Arabidopsis thaliana GN=RECQL4A PE=2 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 1.0e-37
Identity = 100/192 (52.08%), Postives = 116/192 (60.42%), Query Frame = 1 

Query: 2    TPAKGSLVFGKM--YPNIDTPAQPQSEVDVQLSAKLYSSLRMLRTNLVKEAADGVMAYHI 61
            T AKG L   K    P     A P+   DV LSA +Y++LR LRT LVKEA DGVMAYHI
Sbjct: 992  TAAKGPLTSEKQSTLPLTTEDAPPK---DVNLSANMYTALRKLRTALVKEAPDGVMAYHI 1051

Query: 62   FGNATLQQISRRVPRSKEELLDINGIGKAKVSKYGDRILETIESTINEFYGAGKNGS-NS 121
            F N+TLQQISRR+PR+KEELL+ING+GKAKVSKYGD++LETIE+T+NE+YG  K  S  S
Sbjct: 1052 FINSTLQQISRRIPRTKEELLEINGLGKAKVSKYGDQLLETIETTVNEYYGTNKKDSIIS 1111

Query: 122  NDSNDSGKRRRGGNKDKDEYLDENDATKSFDRSKKRATNIQSIDPKVHNSSRPEHPDQFF 181
            NDS DSGKRRR          DEN +    +      +  QS    V N S      +  
Sbjct: 1112 NDSPDSGKRRR----------DENISPNVAEDDDFEVSPSQSCKKTVRNKSNEVLHGECI 1170

Query: 182  DS-----ELDFD 186
            D      ELDFD
Sbjct: 1172 DGDRRGMELDFD 1170

[Close]
BLAST of MELO3C019449 vs. Swiss-Prot
Match: RQL4B_ARATH (ATP-dependent DNA helicase Q-like 4B OS=Arabidopsis thaliana GN=RECQL4B PE=2 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 9.8e-28
Identity = 72/137 (52.55%), Postives = 90/137 (65.69%), Query Frame = 1 

Query: 21   AQPQSEVDVQLSAKLYSSLRMLRTNLVKEAADGVMAYHIFGNATLQQISRRVPRSKEELL 80
            A PQ   D  LS  L ++L+ LRT++VKE+ D VMAYHIFGNATL++IS+R+PR+KEELL
Sbjct: 1024 AAPQ---DSNLSGILLTALKNLRTDIVKESPDLVMAYHIFGNATLKEISKRLPRTKEELL 1083

Query: 81   DINGIGKAKVSKYGDRILETIESTINEFYGAGKNGSNSNDSNDSGKRRRGGNKDKDEYLD 140
            DING+GKAKVSKYGDR+LETI+STIN+ Y              SGKRRR  N + +   D
Sbjct: 1084 DINGLGKAKVSKYGDRLLETIDSTINDHY---------KTRPGSGKRRRDENVNPNVAED 1143

Query: 141  ENDATKSFDRSKKRATN 158
            ++    +    KK   N
Sbjct: 1144 DDPDWSASQSHKKVVKN 1148

[Close]
BLAST of MELO3C019449 vs. TrEMBL
Match: A0A0A0L762_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G221760 PE=4 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 7.4e-107
Identity = 196/203 (96.55%), Postives = 198/203 (97.54%), Query Frame = 1 

Query: 1    MTPAKGSLVFGKMYPNIDTPAQPQSEVDVQLSAKLYSSLRMLRTNLVKEAADGVMAYHIF 60
            MTPAKGSLV GKMYPNIDTPAQPQSEVDVQLSA+LYSSLRMLRTNLVKEAADGVMAYHIF
Sbjct: 977  MTPAKGSLVSGKMYPNIDTPAQPQSEVDVQLSAELYSSLRMLRTNLVKEAADGVMAYHIF 1036

Query: 61   GNATLQQISRRVPRSKEELLDINGIGKAKVSKYGDRILETIESTINEFYGAGKNGSNSND 120
            GNATLQQISRRVPRSKEELLDINGIGKAKVSKYGDRILETIESTI EFYGAGKNGSNSND
Sbjct: 1037 GNATLQQISRRVPRSKEELLDINGIGKAKVSKYGDRILETIESTIKEFYGAGKNGSNSND 1096

Query: 121  SNDSGKRRRGGNKDKDEYLDENDATKSFDRSKKRATNIQSIDPKVHNSSRPEHPDQFFDS 180
            SNDSGKRRRGGNKDKDEYLDENDATKSFDRSKKRATNIQ+ DP VHNSS PEHPDQFFDS
Sbjct: 1097 SNDSGKRRRGGNKDKDEYLDENDATKSFDRSKKRATNIQNKDPNVHNSSMPEHPDQFFDS 1156

Query: 181  ELDFDDSHYEIRDLELNNNLDHG 204
            ELDFDDSHYEIRDLELNNNLDHG
Sbjct: 1157 ELDFDDSHYEIRDLELNNNLDHG 1179

[Close]
BLAST of MELO3C019449 vs. TrEMBL
Match: A0A061E184_THECC (DNA helicase isoform 1 OS=Theobroma cacao GN=TCM_006933 PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 1.1e-57
Identity = 120/187 (64.17%), Postives = 145/187 (77.54%), Query Frame = 1 

Query: 1    MTPAKGSLVFGKMYP-NIDTPAQPQSEVDVQLSAKLYSSLRMLRTNLVKEAADGVMAYHI 60
            +TPAKGSL  GK+ P  +DTPAQ QS+VD+ LSAKLYS+LRMLRT LVKEA DGVMAYHI
Sbjct: 1035 VTPAKGSLTSGKLSPPRVDTPAQSQSKVDLNLSAKLYSALRMLRTVLVKEAGDGVMAYHI 1094

Query: 61   FGNATLQQISRRVPRSKEELLDINGIGKAKVSKYGDRILETIESTINEFYGAGKNGSNSN 120
            FGNATLQ IS+RVPR++EELL+INGIGKAK+SKYGDRILETIE TI E Y   +N S+SN
Sbjct: 1095 FGNATLQHISKRVPRTEEELLEINGIGKAKISKYGDRILETIEVTIKEHYKTDRNSSSSN 1154

Query: 121  DSNDSGKRRRGGNKDKDEYLDENDATKSFDRSKKRATNIQSIDPKVHNSSRPEHPDQFFD 180
            DSNDS KRRR  N      +D++D T+S  RSKKR   +Q+ D   H+S  P++ +Q   
Sbjct: 1155 DSNDSTKRRRDANGAPKANVDDDDFTRSTSRSKKRTVKMQNNDGGAHSSKDPDYNNQCTG 1214

Query: 181  SELDFDD 187
            ++LDFDD
Sbjct: 1215 NDLDFDD 1221

[Close]
BLAST of MELO3C019449 vs. TrEMBL
Match: A0A067KV41_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04990 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 5.4e-57
Identity = 124/210 (59.05%), Postives = 154/210 (73.33%), Query Frame = 1 

Query: 1    MTPAKGSLVFGKMYP-NIDTPAQPQSEVD-----------VQLSAKLYSSLRMLRTNLVK 60
            +TPAKG LV GK  P  +DTPAQPQSE D           + LSAKLYS+LRMLRT LVK
Sbjct: 1017 VTPAKGLLVSGKQSPPRVDTPAQPQSEGDFAPAQPQPEGDLNLSAKLYSALRMLRTILVK 1076

Query: 61   EAADGVMAYHIFGNATLQQISRRVPRSKEELLDINGIGKAKVSKYGDRILETIESTINEF 120
            EA +GVMAYHIFGNATLQ +S+R+PR+KEELL+INGIGK KVS+YGDR+LETIESTI E+
Sbjct: 1077 EAGEGVMAYHIFGNATLQHLSKRIPRTKEELLEINGIGKVKVSRYGDRLLETIESTIKEY 1136

Query: 121  YGAGKNGSNSNDSNDSGKRRRGGNKDKDEYLDENDATKSFDRSKKRATNIQSIDPKVHNS 180
            Y   +N S+SNDSNDS KRRR  N + + +++++D TKS  RSK+RA   Q+ DP VHNS
Sbjct: 1137 YKTDRNSSSSNDSNDSMKRRRNENANPNGFVEDDDYTKSTGRSKRRAAKFQNKDPDVHNS 1196

Query: 181  SRPEHPDQFFDSELDFDDSHY--EIRDLEL 197
            S+ ++     D +LDF D  Y  +I  LE+
Sbjct: 1197 SKTDY--NCLDDDLDFQDLCYDQDINSLEI 1224

[Close]
BLAST of MELO3C019449 vs. TrEMBL
Match: B9GZD8_POPTR (DNA helicase family protein OS=Populus trichocarpa GN=POPTR_0003s01160g PE=4 SV=2)

HSP 1 Score: 226.9 bits (577), Expect = 2.7e-56
Identity = 119/192 (61.98%), Postives = 148/192 (77.08%), Query Frame = 1 

Query: 2    TPAKGSLVFGKMYP-NIDTPAQPQSEVDVQLSAKLYSSLRMLRTNLVKEAADGVMAYHIF 61
            TPAKGSL+ GK+ P    +PAQPQSEVD+ LSAKL+S+LRMLRT L+KEA DGVMAYHIF
Sbjct: 999  TPAKGSLMSGKLSPPQAGSPAQPQSEVDLNLSAKLFSALRMLRTALLKEAGDGVMAYHIF 1058

Query: 62   GNATLQQISRRVPRSKEELLDINGIGKAKVSKYGDRILETIESTINEFYGAGKNGSNSND 121
            GNATLQ +S+R+PR+KEELL+INGIGKAKVSKYGDR+LETIESTI E+    +N S SN+
Sbjct: 1059 GNATLQHMSKRIPRTKEELLEINGIGKAKVSKYGDRVLETIESTIREYNKGDRNSSGSNE 1118

Query: 122  SNDSGKRRRGGNKDKDEYLDENDA-TKSFDRSKKRATNIQSIDPKVHNSSRPEHPDQFFD 181
            S+DS KRRR  +K  +  ++E D  TKS  RSKKR    Q+   +VHNS  P   +QF D
Sbjct: 1119 SSDSIKRRRDASKALNGNMEEEDEFTKSTGRSKKRTATRQNKGSEVHNSMEPVSCNQFLD 1178

Query: 182  SELDFDDSHYEI 192
             +LDF DS++++
Sbjct: 1179 DDLDFKDSYHDL 1190

[Close]
BLAST of MELO3C019449 vs. TrEMBL
Match: V4SBW7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10000077mg PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 7.8e-56
Identity = 124/191 (64.92%), Postives = 150/191 (78.53%), Query Frame = 1 

Query: 1    MTPAKGSLVFGKMYPNI-DTPAQPQSEVDVQLSAKLYSSLRMLRTNLVKEAADGVMAYHI 60
            +TPAKGSL+ GK+ P+  DTP+QPQ+EVD+ LSAKLYSSLRMLRT LVKEA +GVMAYHI
Sbjct: 933  VTPAKGSLMSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGVMAYHI 992

Query: 61   FGNATLQQISRRVPRSKEELLDINGIGKAKVSKYGDRILETIESTINEFYGAGKNGSNSN 120
            FGNATLQ +S+RVPR++EELL+INGIGKAKVSKYG R+LETIESTI EFY   KNGS+SN
Sbjct: 993  FGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKEFYKTDKNGSSSN 1052

Query: 121  DSNDSGKRRRGGNKDKDEYL-DENDATKSFDRSKKRATNIQSIDPKVHNSSRPEHPDQFF 180
            DSNDSGKRRR  N+  +    D++D TKS  RSKKRA+  Q+   +V N + P+  +   
Sbjct: 1053 DSNDSGKRRRDENEAPNSNKGDDDDFTKSTARSKKRASKSQNKTVEVINHNEPDSYECVD 1112

Query: 181  DSELDFDDSHY 190
            D  LDFD+  Y
Sbjct: 1113 D--LDFDEYEY 1121

[Close]
BLAST of MELO3C019449 vs. TAIR10
Match: AT1G10930.1 (AT1G10930.1 DNA helicase (RECQl4A))

HSP 1 Score: 158.3 bits (399), Expect = 5.9e-39
Identity = 100/192 (52.08%), Postives = 116/192 (60.42%), Query Frame = 1 

Query: 2    TPAKGSLVFGKM--YPNIDTPAQPQSEVDVQLSAKLYSSLRMLRTNLVKEAADGVMAYHI 61
            T AKG L   K    P     A P+   DV LSA +Y++LR LRT LVKEA DGVMAYHI
Sbjct: 992  TAAKGPLTSEKQSTLPLTTEDAPPK---DVNLSANMYTALRKLRTALVKEAPDGVMAYHI 1051

Query: 62   FGNATLQQISRRVPRSKEELLDINGIGKAKVSKYGDRILETIESTINEFYGAGKNGS-NS 121
            F N+TLQQISRR+PR+KEELL+ING+GKAKVSKYGD++LETIE+T+NE+YG  K  S  S
Sbjct: 1052 FINSTLQQISRRIPRTKEELLEINGLGKAKVSKYGDQLLETIETTVNEYYGTNKKDSIIS 1111

Query: 122  NDSNDSGKRRRGGNKDKDEYLDENDATKSFDRSKKRATNIQSIDPKVHNSSRPEHPDQFF 181
            NDS DSGKRRR          DEN +    +      +  QS    V N S      +  
Sbjct: 1112 NDSPDSGKRRR----------DENISPNVAEDDDFEVSPSQSCKKTVRNKSNEVLHGECI 1170

Query: 182  DS-----ELDFD 186
            D      ELDFD
Sbjct: 1172 DGDRRGMELDFD 1170

[Close]
BLAST of MELO3C019449 vs. TAIR10
Match: AT1G60930.1 (AT1G60930.1 RECQ helicase L4B)

HSP 1 Score: 125.2 bits (313), Expect = 5.5e-29
Identity = 72/137 (52.55%), Postives = 90/137 (65.69%), Query Frame = 1 

Query: 21   AQPQSEVDVQLSAKLYSSLRMLRTNLVKEAADGVMAYHIFGNATLQQISRRVPRSKEELL 80
            A PQ   D  LS  L ++L+ LRT++VKE+ D VMAYHIFGNATL++IS+R+PR+KEELL
Sbjct: 1024 AAPQ---DSNLSGILLTALKNLRTDIVKESPDLVMAYHIFGNATLKEISKRLPRTKEELL 1083

Query: 81   DINGIGKAKVSKYGDRILETIESTINEFYGAGKNGSNSNDSNDSGKRRRGGNKDKDEYLD 140
            DING+GKAKVSKYGDR+LETI+STIN+ Y              SGKRRR  N + +   D
Sbjct: 1084 DINGLGKAKVSKYGDRLLETIDSTINDHY---------KTRPGSGKRRRDENVNPNVAED 1143

Query: 141  ENDATKSFDRSKKRATN 158
            ++    +    KK   N
Sbjct: 1144 DDPDWSASQSHKKVVKN 1148

[Close]
BLAST of MELO3C019449 vs. NCBI nr
Match: gi|659112092|ref|XP_008456062.1| (PREDICTED: ATP-dependent DNA helicase Q-like 4A isoform X5 [Cucumis melo])

HSP 1 Score: 409.8 bits (1052), Expect = 3.2e-111
Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 1 

Query: 1   MTPAKGSLVFGKMYPNIDTPAQPQSEVDVQLSAKLYSSLRMLRTNLVKEAADGVMAYHIF 60
           MTPAKGSLVFGKMYPNIDTPAQPQSEVDVQLSAKLYSSLRMLRTNLVKEAADGVMAYHIF
Sbjct: 632 MTPAKGSLVFGKMYPNIDTPAQPQSEVDVQLSAKLYSSLRMLRTNLVKEAADGVMAYHIF 691

Query: 61  GNATLQQISRRVPRSKEELLDINGIGKAKVSKYGDRILETIESTINEFYGAGKNGSNSND 120
           GNATLQQISRRVPRSKEELLDINGIGKAKVSKYGDRILETIESTINEFYGAGKNGSNSND
Sbjct: 692 GNATLQQISRRVPRSKEELLDINGIGKAKVSKYGDRILETIESTINEFYGAGKNGSNSND 751

Query: 121 SNDSGKRRRGGNKDKDEYLDENDATKSFDRSKKRATNIQSIDPKVHNSSRPEHPDQFFDS 180
           SNDSGKRRRGGNKDKDEYLDENDATKSFDRSKKRATNIQSIDPKVHNSSRPEHPDQFFDS
Sbjct: 752 SNDSGKRRRGGNKDKDEYLDENDATKSFDRSKKRATNIQSIDPKVHNSSRPEHPDQFFDS 811

Query: 181 ELDFDDSHYEIRDLELNNNLDHG 204
           ELDFDDSHYEIRDLELNNNLDHG
Sbjct: 812 ELDFDDSHYEIRDLELNNNLDHG 834

[Close]
BLAST of MELO3C019449 vs. NCBI nr
Match: gi|659112090|ref|XP_008456061.1| (PREDICTED: ATP-dependent DNA helicase Q-like 4A isoform X4 [Cucumis melo])

HSP 1 Score: 409.8 bits (1052), Expect = 3.2e-111
Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 1 

Query: 1    MTPAKGSLVFGKMYPNIDTPAQPQSEVDVQLSAKLYSSLRMLRTNLVKEAADGVMAYHIF 60
            MTPAKGSLVFGKMYPNIDTPAQPQSEVDVQLSAKLYSSLRMLRTNLVKEAADGVMAYHIF
Sbjct: 930  MTPAKGSLVFGKMYPNIDTPAQPQSEVDVQLSAKLYSSLRMLRTNLVKEAADGVMAYHIF 989

Query: 61   GNATLQQISRRVPRSKEELLDINGIGKAKVSKYGDRILETIESTINEFYGAGKNGSNSND 120
            GNATLQQISRRVPRSKEELLDINGIGKAKVSKYGDRILETIESTINEFYGAGKNGSNSND
Sbjct: 990  GNATLQQISRRVPRSKEELLDINGIGKAKVSKYGDRILETIESTINEFYGAGKNGSNSND 1049

Query: 121  SNDSGKRRRGGNKDKDEYLDENDATKSFDRSKKRATNIQSIDPKVHNSSRPEHPDQFFDS 180
            SNDSGKRRRGGNKDKDEYLDENDATKSFDRSKKRATNIQSIDPKVHNSSRPEHPDQFFDS
Sbjct: 1050 SNDSGKRRRGGNKDKDEYLDENDATKSFDRSKKRATNIQSIDPKVHNSSRPEHPDQFFDS 1109

Query: 181  ELDFDDSHYEIRDLELNNNLDHG 204
            ELDFDDSHYEIRDLELNNNLDHG
Sbjct: 1110 ELDFDDSHYEIRDLELNNNLDHG 1132

[Close]
BLAST of MELO3C019449 vs. NCBI nr
Match: gi|659112088|ref|XP_008456060.1| (PREDICTED: ATP-dependent DNA helicase Q-like 4A isoform X3 [Cucumis melo])

HSP 1 Score: 409.8 bits (1052), Expect = 3.2e-111
Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 1 

Query: 1    MTPAKGSLVFGKMYPNIDTPAQPQSEVDVQLSAKLYSSLRMLRTNLVKEAADGVMAYHIF 60
            MTPAKGSLVFGKMYPNIDTPAQPQSEVDVQLSAKLYSSLRMLRTNLVKEAADGVMAYHIF
Sbjct: 964  MTPAKGSLVFGKMYPNIDTPAQPQSEVDVQLSAKLYSSLRMLRTNLVKEAADGVMAYHIF 1023

Query: 61   GNATLQQISRRVPRSKEELLDINGIGKAKVSKYGDRILETIESTINEFYGAGKNGSNSND 120
            GNATLQQISRRVPRSKEELLDINGIGKAKVSKYGDRILETIESTINEFYGAGKNGSNSND
Sbjct: 1024 GNATLQQISRRVPRSKEELLDINGIGKAKVSKYGDRILETIESTINEFYGAGKNGSNSND 1083

Query: 121  SNDSGKRRRGGNKDKDEYLDENDATKSFDRSKKRATNIQSIDPKVHNSSRPEHPDQFFDS 180
            SNDSGKRRRGGNKDKDEYLDENDATKSFDRSKKRATNIQSIDPKVHNSSRPEHPDQFFDS
Sbjct: 1084 SNDSGKRRRGGNKDKDEYLDENDATKSFDRSKKRATNIQSIDPKVHNSSRPEHPDQFFDS 1143

Query: 181  ELDFDDSHYEIRDLELNNNLDHG 204
            ELDFDDSHYEIRDLELNNNLDHG
Sbjct: 1144 ELDFDDSHYEIRDLELNNNLDHG 1166

[Close]
BLAST of MELO3C019449 vs. NCBI nr
Match: gi|659112086|ref|XP_008456059.1| (PREDICTED: ATP-dependent DNA helicase Q-like 4A isoform X2 [Cucumis melo])

HSP 1 Score: 409.8 bits (1052), Expect = 3.2e-111
Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 1 

Query: 1    MTPAKGSLVFGKMYPNIDTPAQPQSEVDVQLSAKLYSSLRMLRTNLVKEAADGVMAYHIF 60
            MTPAKGSLVFGKMYPNIDTPAQPQSEVDVQLSAKLYSSLRMLRTNLVKEAADGVMAYHIF
Sbjct: 974  MTPAKGSLVFGKMYPNIDTPAQPQSEVDVQLSAKLYSSLRMLRTNLVKEAADGVMAYHIF 1033

Query: 61   GNATLQQISRRVPRSKEELLDINGIGKAKVSKYGDRILETIESTINEFYGAGKNGSNSND 120
            GNATLQQISRRVPRSKEELLDINGIGKAKVSKYGDRILETIESTINEFYGAGKNGSNSND
Sbjct: 1034 GNATLQQISRRVPRSKEELLDINGIGKAKVSKYGDRILETIESTINEFYGAGKNGSNSND 1093

Query: 121  SNDSGKRRRGGNKDKDEYLDENDATKSFDRSKKRATNIQSIDPKVHNSSRPEHPDQFFDS 180
            SNDSGKRRRGGNKDKDEYLDENDATKSFDRSKKRATNIQSIDPKVHNSSRPEHPDQFFDS
Sbjct: 1094 SNDSGKRRRGGNKDKDEYLDENDATKSFDRSKKRATNIQSIDPKVHNSSRPEHPDQFFDS 1153

Query: 181  ELDFDDSHYEIRDLELNNNLDHG 204
            ELDFDDSHYEIRDLELNNNLDHG
Sbjct: 1154 ELDFDDSHYEIRDLELNNNLDHG 1176

[Close]
BLAST of MELO3C019449 vs. NCBI nr
Match: gi|659112082|ref|XP_008456057.1| (PREDICTED: ATP-dependent DNA helicase Q-like 4A isoform X1 [Cucumis melo])

HSP 1 Score: 409.8 bits (1052), Expect = 3.2e-111
Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 1 

Query: 1    MTPAKGSLVFGKMYPNIDTPAQPQSEVDVQLSAKLYSSLRMLRTNLVKEAADGVMAYHIF 60
            MTPAKGSLVFGKMYPNIDTPAQPQSEVDVQLSAKLYSSLRMLRTNLVKEAADGVMAYHIF
Sbjct: 997  MTPAKGSLVFGKMYPNIDTPAQPQSEVDVQLSAKLYSSLRMLRTNLVKEAADGVMAYHIF 1056

Query: 61   GNATLQQISRRVPRSKEELLDINGIGKAKVSKYGDRILETIESTINEFYGAGKNGSNSND 120
            GNATLQQISRRVPRSKEELLDINGIGKAKVSKYGDRILETIESTINEFYGAGKNGSNSND
Sbjct: 1057 GNATLQQISRRVPRSKEELLDINGIGKAKVSKYGDRILETIESTINEFYGAGKNGSNSND 1116

Query: 121  SNDSGKRRRGGNKDKDEYLDENDATKSFDRSKKRATNIQSIDPKVHNSSRPEHPDQFFDS 180
            SNDSGKRRRGGNKDKDEYLDENDATKSFDRSKKRATNIQSIDPKVHNSSRPEHPDQFFDS
Sbjct: 1117 SNDSGKRRRGGNKDKDEYLDENDATKSFDRSKKRATNIQSIDPKVHNSSRPEHPDQFFDS 1176

Query: 181  ELDFDDSHYEIRDLELNNNLDHG 204
            ELDFDDSHYEIRDLELNNNLDHG
Sbjct: 1177 ELDFDDSHYEIRDLELNNNLDHG 1199

The following BLAST results are available for this feature:
BLAST of MELO3C019449 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RQL4A_ARATH1.0e-3752.08ATP-dependent DNA helicase Q-like 4A OS=Arabidopsis thaliana GN=RECQL4A PE=2 SV=... [more]
RQL4B_ARATH9.8e-2852.55ATP-dependent DNA helicase Q-like 4B OS=Arabidopsis thaliana GN=RECQL4B PE=2 SV=... [more]
BLAST of MELO3C019449 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L762_CUCSA7.4e-10796.55Uncharacterized protein OS=Cucumis sativus GN=Csa_3G221760 PE=4 SV=1[more]
A0A061E184_THECC1.1e-5764.17DNA helicase isoform 1 OS=Theobroma cacao GN=TCM_006933 PE=4 SV=1[more]
A0A067KV41_JATCU5.4e-5759.05Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04990 PE=4 SV=1[more]
B9GZD8_POPTR2.7e-5661.98DNA helicase family protein OS=Populus trichocarpa GN=POPTR_0003s01160g PE=4 SV=... [more]
V4SBW7_9ROSI7.8e-5664.92Uncharacterized protein OS=Citrus clementina GN=CICLE_v10000077mg PE=4 SV=1[more]
BLAST of MELO3C019449 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G10930.15.9e-3952.08 DNA helicase (RECQl4A)[more]
AT1G60930.15.5e-2952.55 RECQ helicase L4B[more]
BLAST of MELO3C019449 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659112092|ref|XP_008456062.1|3.2e-111100.00PREDICTED: ATP-dependent DNA helicase Q-like 4A isoform X5 [Cucumis melo][more]
gi|659112090|ref|XP_008456061.1|3.2e-111100.00PREDICTED: ATP-dependent DNA helicase Q-like 4A isoform X4 [Cucumis melo][more]
gi|659112088|ref|XP_008456060.1|3.2e-111100.00PREDICTED: ATP-dependent DNA helicase Q-like 4A isoform X3 [Cucumis melo][more]
gi|659112086|ref|XP_008456059.1|3.2e-111100.00PREDICTED: ATP-dependent DNA helicase Q-like 4A isoform X2 [Cucumis melo][more]
gi|659112082|ref|XP_008456057.1|3.2e-111100.00PREDICTED: ATP-dependent DNA helicase Q-like 4A isoform X1 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002121HRDC_dom
IPR010997HRDC-like_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0000166nucleotide binding
GO:0003824catalytic activity
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: Biological Process
TermDefinition
GO:0044237cellular metabolic process
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032508 DNA duplex unwinding
biological_process GO:0006310 DNA recombination
biological_process GO:0006281 DNA repair
biological_process GO:0006260 DNA replication
biological_process GO:0044237 cellular metabolic process
cellular_component GO:0005657 replication fork
cellular_component GO:0005622 intracellular
molecular_function GO:0005524 ATP binding
molecular_function GO:0043140 ATP-dependent 3'-5' DNA helicase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003824 catalytic activity
molecular_function GO:0000166 nucleotide binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C019449T1MELO3C019449T1mRNA


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002121HRDC domainGENE3DG3DSA:1.10.150.80coord: 33..104
score: 1.3
IPR002121HRDC domainPFAMPF00570HRDCcoord: 34..101
score: 3.6
IPR002121HRDC domainPROFILEPS50967HRDCcoord: 29..111
score: 18
IPR010997HRDC-likeunknownSSF47819HRDC-likecoord: 32..104
score: 5.89
NoneNo IPR availablePANTHERPTHR13710DNA HELICASE RECQ FAMILY MEMBERcoord: 15..228
score: 1.3
NoneNo IPR availablePANTHERPTHR13710:SF94ATP-DEPENDENT DNA HELICASE RECQ FAMILY PROTEINcoord: 15..228
score: 1.3

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C019449Cucurbita moschata (Rifu)cmomeB290
MELO3C019449Cucurbita moschata (Rifu)cmomeB683
MELO3C019449Wild cucumber (PI 183967)cpimeB241
MELO3C019449Cucumber (Chinese Long) v2cumeB166
MELO3C019449Watermelon (Charleston Gray)mewcgB427
MELO3C019449Watermelon (97103) v1mewmB461
MELO3C019449Cucurbita pepo (Zucchini)cpemeB192
MELO3C019449Cucurbita pepo (Zucchini)cpemeB412
MELO3C019449Bottle gourd (USVL1VR-Ls)lsimeB368
MELO3C019449Cucumber (Gy14) v2cgybmeB210
MELO3C019449Silver-seed gourdcarmeB0041
MELO3C019449Silver-seed gourdcarmeB0651
MELO3C019449Cucumber (Chinese Long) v3cucmeB247
MELO3C019449Watermelon (97103) v2mewmbB434
MELO3C019449Wax gourdmewgoB530
MELO3C019449Cucumber (Gy14) v1cgymeB002
MELO3C019449Cucurbita maxima (Rimu)cmameB298
MELO3C019449Cucurbita maxima (Rimu)cmameB691