MELO3C019437.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C019437.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionPentatricopeptide repeat-containing protein
Locationchr06 : 10764516 .. 10766783 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TCACTCTTCCACAATTCCAAAAGCTTCAATTCCCTAAACTTCCTCTACTAATCACTCTAATCCTAATTTACCTGCTTTCAATGACAAGGGGATTTCGTTTCAATGCTGTCTTTCATTGTTCCTACGCAATTGCAAGACAGGTAACATTACTGCAATTCAAGCATTTCATTTCTTTGACCTAATGATGCGTTCATATCCTCCACCCCCCCTTTCTTCTTTCAATCGCTTGCTCGGTGGGCTTGCTAAGATTAACCATTACTCTCAACTATTTTCTCTTTATAATAAAATGCACCTTGCTGGACTTTCGCCTGATATCTTCACATTGAATATATTGGTGAATTGCCTTTGTAAGGTCAATCGAGTTAGCGAAGCTCTTGCGGCCATGGTAGGGATTTTAAGGAGAGGTTATATTCCTAATATAGTCATATATACGACCTTGATTAAGGGATTGTGTATGGAGCATAGGATTAGTGAAGCCACACGGTTATTTATCAAAATGCAAAAGTTAGGTTGTACGCTCGATGTGGTTACTTATGGGACTTTGATCAAGGGGCTTTGCCAACCGGGAATATTAACATTGCTCTTAAGTTGCATCAAAAAATGCTCAATGACACTAGTCATTATGGGATTAATTGTAAGCCTGACGTTATTTCCTATAGTATCATCATAGATGGGCTTTGTAAGGTTGGACGTGAAGAAGAGGCAAAAGGACTTTTTGAGGAAATGAAAGCTCAGGGAATGATTCCCAATGTCATTTCATATAGCTCCTTAATTCATGGATTTTGTTGGGCTGGAAAGTGGGAGGAGTCTAAACGTTTGTTCGACGATTGAGGATTGAGGTGTTTAACCAAATATGGTCACATTTACTCTGTTGATTGATATGCTTTGCAAGGAAGGAAAGGTTTTTGAGGCTCACAAGTTGTTTAAGGTCATGATTCGAAAAAGTATCATTCCTTATTTATTTACTTATAATTCACTGATTGAGGGGTTTTGTAAGGCTGGTGATTTGAATAGTACCAAAGAACTGTTCCTTAGTATCCCAAGCAAAGGATGTGAACCTGATGAGATCTACTACAATATACTAATTAATGGGTATTGTAAAACTTGGAAGATGAAAGAAGCAATGAACCTTTACAATGAAATGCTTCAAGTAGGAAAGAGACCAGATTTGAAAACATATGGTACCTTGTTAACAGGAGGTTGGTGATGTAAAGAAGCTATTTGGTGTCATGAAAGCTTATGGTATTTCTGCAGATTCTTGTATATATGGTATTTTCTTAGATGGGTTGTGTAAGAATGATTGTTTATATGAAGCAATGGAACTTTTTATTGAGCTAAAATCACACAACTACAAATTGGATATTGAAAACTATAGTTGTCTAATTGATGGCCTGTGTAAAGTAGGAAATCTTGAAATTGCTTGGGAGCTTTTTGAAAAACTATCTAAAGAAGGGATTCAACCAGATGTTGTCACTTATTCCATTATGATCAATGGGTTTTGTAAAGTGGGACAAGTAGATAACGCAAATATTTTGTTTGAAAAGATGGAAGAAAATGGTTGTACTCCTAACATAATTACTTATGAAACCCTTCTGCGTGGTTTCTATGAGAATAATAAGTTAGAGGAGGTGGTTAAACTTCTCCATGAGATGGTTCAAAGGGATTTATCACCGGATGCTAGCATTTGCACCATAATCGTTGACATGCTCTGCAAAGATGAAAAATATCGAGAATGTCTAGACTTGCTTCCAAAATTTCTAGTCCAACAGCATCGAGGTTGATATTGAATTTTTTTTTTTTTTTGAAAGCCCACCTTGACCTTTAATTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCGAGGTTGATATTGAATTTTTTTTTTTTGTAAAGCCCACCTTGACCTTTAATTTAGTTCTAATATTAAGTTTTTGAGGTTCCACATTTGATGCAACTCTTTTTTTTTCTTGCACTGTCTCTGAGCGGCCATGGTTGATTGAACATTTATAAATCTTTTAGTTCATAAACTTAGTATATAAATATCATACTTCTTGACATCAATAAGTACTGA

mRNA sequence

TCACTCTTCCACAATTCCAAAAGCTTCAATTCCCTAAACTTCCTCTACTAATCACTCTAATCCTAATTTACCTGCTTTCAATGACAAGGGGATTTCGTTTCAATGCTGTCTTTCATTGTTCCTACGCAATTGCAAGACAGGTAACATTACTGCAATTCAAGCATTTCATTTCTTTGACCTAATGATGCGTTCATATCCTCCACCCCCCCTTTCTTCTTTCAATCGCTTGCTCGGTGGGCTTGCTAAGATTAACCATTACTCTCAACTATTTTCTCTTTATAATAAAATGCACCTTGCTGGACTTTCGCCTGATATCTTCACATTGAATATATTGGTGAATTGCCTTTGTAAGGTCAATCGAGTTAGCGAAGCTCTTGCGGCCATGGTAGGGATTTTAAGGAGAGGTTATATTCCTAATATAGTCATATATACGACCTTGATTAAGGGATTGTGTATGGAGCATAGGATTAGTGAAGCCACACGGTTATTTATCAAAATGCAAAAGTTAGGTTGTACGCTCGATGTGGTTACTTATGGGACTTTGATCAAGGGGCTTTGCCAACCGGGAATATTAACATTGCTCTTAAGTTGCATCAAAAAATGCTCAATGACACTAGTCATTATGGGATTAATTGTAAGCCTGACGTTATTTCCTATAGTATCATCATAGATGGGCTTTGTAAGGTTGGACGTGAAGAAGAGGCAAAAGGACTTTTTGAGGAAATGAAAGCTCAGGGAATGATTCCCAATGTCATTTCATATAGCTCCTTAATTCATGGATTTTGTTGGGCTGGAAAACCAAATATGGTCACATTTACTCTGTTGATTGATATGCTTTGCAAGGAAGGAAAGGTTTTTGAGGCTCACAAGTTGTTTAAGGTCATGATTCGAAAAAGTATCATTCCTTATTTATTTACTTATAATTCACTGATTGAGGGgTTTTGTAAGGCTGGTGATTTGAATAGTACCAAAGAACTGTTCCTTAGTATCCCAAGCAAAGGATGTGAACCTGATGAGATCTACTACAATATACTAATTAATGGGTATTGTAAAACTTGGAAGATGAAAGAAGCAATGAACCTTTACAATGAAATGCTTCAAGAGGTTGGTGATGTAAAGAAGCTATTTGGTGTCATGAAAGCTTATGGTATTTCTGCAGATTCTTGTATATATGGTATTTTCTTAGATGGGTTGTGTAAGAATGATTGTTTATATGAAGCAATGGAACTTTTTATTGAGCTAAAATCACACAACTACAAATTGGATATTGAAAACTATAGTTGTCTAATTGATGGCCTGTGTAAAGTAGGAAATCTTGAAATTGCTTGGGAGCTTTTTGAAAAACTATCTAAAGAAGGGATTCAACCAGATGTTGTCACTTATTCCATTATGATCAATGGGTTTTGTAAAGTGGGACAAGTAGATAACGCAAATATTTTGTTTGAAAAGATGGAAGAAAATGGTTGTACTCCTAACATAATTACTTATGAAACCCTTCTGCGTGGTTTCTATGAGAATAATAAGTTAGAGGAGGTGGTTAAACTTCTCCATGAGATGTATATAAATATCATACTTCTTGACATCAATAAGTACTGA

Coding sequence (CDS)

ATGCTCAATGACACTAGTCATTATGGGATTAATTGTAAGCCTGACGTTATTTCCTATAGTATCATCATAGATGGGCTTTGTAAGGTTGGACGTGAAGAAGAGGCAAAAGGACTTTTTGAGGAAATGAAAGCTCAGGGAATGATTCCCAATGTCATTTCATATAGCTCCTTAATTCATGGATTTTGTTGGGCTGGAAAACCAAATATGGTCACATTTACTCTGTTGATTGATATGCTTTGCAAGGAAGGAAAGGTTTTTGAGGCTCACAAGTTGTTTAAGGTCATGATTCGAAAAAGTATCATTCCTTATTTATTTACTTATAATTCACTGATTGAGGGGTTTTGTAAGGCTGGTGATTTGAATAGTACCAAAGAACTGTTCCTTAGTATCCCAAGCAAAGGATGTGAACCTGATGAGATCTACTACAATATACTAATTAATGGGTATTGTAAAACTTGGAAGATGAAAGAAGCAATGAACCTTTACAATGAAATGCTTCAAGAGGTTGGTGATGTAAAGAAGCTATTTGGTGTCATGAAAGCTTATGGTATTTCTGCAGATTCTTGTATATATGGTATTTTCTTAGATGGGTTGTGTAAGAATGATTGTTTATATGAAGCAATGGAACTTTTTATTGAGCTAAAATCACACAACTACAAATTGGATATTGAAAACTATAGTTGTCTAATTGATGGCCTGTGTAAAGTAGGAAATCTTGAAATTGCTTGGGAGCTTTTTGAAAAACTATCTAAAGAAGGGATTCAACCAGATGTTGTCACTTATTCCATTATGATCAATGGGTTTTGTAAAGTGGGACAAGTAGATAACGCAAATATTTTGTTTGAAAAGATGGAAGAAAATGGTTGTACTCCTAACATAATTACTTATGAAACCCTTCTGCGTGGTTTCTATGAGAATAATAAGTTAGAGGAGGTGGTTAAACTTCTCCATGAGATGTATATAAATATCATACTTCTTGACATCAATAAGTACTGA

Protein sequence

MLNDTSHYGINCKPDVISYSIIIDGLCKVGREEEAKGLFEEMKAQGMIPNVISYSSLIHGFCWAGKPNMVTFTLLIDMLCKEGKVFEAHKLFKVMIRKSIIPYLFTYNSLIEGFCKAGDLNSTKELFLSIPSKGCEPDEIYYNILINGYCKTWKMKEAMNLYNEMLQEVGDVKKLFGVMKAYGISADSCIYGIFLDGLCKNDCLYEAMELFIELKSHNYKLDIENYSCLIDGLCKVGNLEIAWELFEKLSKEGIQPDVVTYSIMINGFCKVGQVDNANILFEKMEENGCTPNIITYETLLRGFYENNKLEEVVKLLHEMYINIILLDINKY
Homology
[Close]
BLAST of MELO3C019437.2 vs. NCBI nr
Match: XP_016901890.1 (PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial [Cucumis melo])

HSP 1 Score: 85.1 bits (209), Expect = 4.8e-13
Identity = 69/100 (69.00%), Postives = 69/100 (69.00%), Query Frame = 0 

Query: 2   LNDTSHYGINCKPDVISYSIIIDGLCKVGREEEAKGLFEEMKAQGMIXXXXXXXXXXXXX 61
           LNDTSHYG                               EMKAQGMIXXXXXXXXXXXXX
Sbjct: 142 LNDTSHYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMKAQGMIXXXXXXXXXXXXX 201

Query: 62  XXXXXXNMVTFTLLIDMLCKEGKVFEAHKLFKVMIRKSII 102
           XXXXXXNMVTFTLLIDMLCKEGKVFEAHKLFKVMIRKSII
Sbjct: 202 XXXXXXNMVTFTLLIDMLCKEGKVFEAHKLFKVMIRKSII 241

[Close]
BLAST of MELO3C019437.2 vs. NCBI nr
Match: XP_011659252.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g62914, mitochondrial-like isoform X1 [Cucumis sativus] >XP_011659253.1 PREDICTED: pentatricopeptide repeat-containing protein At1g62914, mitochondrial-like isoform X2 [Cucumis sativus])

HSP 1 Score: 77.0 bits (188), Expect = 1.3e-10
Identity = 35/47 (74.47%), Postives = 40/47 (85.11%), Query Frame = 0 

Query: 1  MLNDTSHYGINCKPDVISYSIIIDGLCKVGREEEAKGLFEEMKAQGM 48
          MLNDT  YGI CKP +ISYSIIIDGLCK  RE+EA+ LF+EMKAQG+
Sbjct: 1  MLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGI 47

[Close]
BLAST of MELO3C019437.2 vs. NCBI nr
Match: XP_016901072.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g63330-like isoform X3 [Cucumis melo])

HSP 1 Score: 76.3 bits (186), Expect = 2.2e-10
Identity = 36/48 (75.00%), Postives = 41/48 (85.42%), Query Frame = 0 

Query: 1   MLNDTSHYGINCKPDVISYSIIIDGLCKVGREEEAKGLFEEMKAQGMI 49
           MLN+TS YGIN KP V+SY+IIID LCK  RE+EA+ LFEEMKAQGMI
Sbjct: 227 MLNETSRYGINFKPIVVSYTIIIDALCKDRREDEARELFEEMKAQGMI 274

[Close]
BLAST of MELO3C019437.2 vs. NCBI nr
Match: XP_016901059.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g63080, mitochondrial-like isoform X1 [Cucumis melo] >XP_016901060.1 PREDICTED: pentatricopeptide repeat-containing protein At1g63080, mitochondrial-like isoform X1 [Cucumis melo] >XP_016901061.1 PREDICTED: pentatricopeptide repeat-containing protein At1g63080, mitochondrial-like isoform X1 [Cucumis melo] >XP_016901062.1 PREDICTED: pentatricopeptide repeat-containing protein At1g63080, mitochondrial-like isoform X1 [Cucumis melo] >XP_016901063.1 PREDICTED: pentatricopeptide repeat-containing protein At1g63080, mitochondrial-like isoform X1 [Cucumis melo] >XP_016901064.1 PREDICTED: pentatricopeptide repeat-containing protein At1g63080, mitochondrial-like isoform X1 [Cucumis melo] >XP_016901065.1 PREDICTED: pentatricopeptide repeat-containing protein At1g63080, mitochondrial-like isoform X1 [Cucumis melo] >XP_016901066.1 PREDICTED: pentatricopeptide repeat-containing protein At1g63080, mitochondrial-like isoform X1 [Cucumis melo] >XP_016901067.1 PREDICTED: pentatricopeptide repeat-containing protein At1g63080, mitochondrial-like isoform X1 [Cucumis melo] >XP_016901068.1 PREDICTED: pentatricopeptide repeat-containing protein At1g63080, mitochondrial-like isoform X1 [Cucumis melo] >XP_016901069.1 PREDICTED: pentatricopeptide repeat-containing protein At1g63080, mitochondrial-like isoform X1 [Cucumis melo] >XP_016901070.1 PREDICTED: pentatricopeptide repeat-containing protein At1g63080, mitochondrial-like isoform X1 [Cucumis melo])

HSP 1 Score: 70.5 bits (171), Expect = 1.2e-08
Identity = 32/47 (68.09%), Postives = 37/47 (78.72%), Query Frame = 0 

Query: 1   MLNDTSHYGINCKPDVISYSIIIDGLCKVGREEEAKGLFEEMKAQGM 48
           ML+  S YGI CKP +ISYSI+ID LCK  RE+EA  LF+EMKAQGM
Sbjct: 207 MLHGPSRYGIKCKPTIISYSIVIDALCKDRREDEASELFKEMKAQGM 253

[Close]
BLAST of MELO3C019437.2 vs. NCBI nr
Match: XP_016901071.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g63330-like isoform X2 [Cucumis melo])

HSP 1 Score: 70.5 bits (171), Expect = 1.2e-08
Identity = 32/47 (68.09%), Postives = 37/47 (78.72%), Query Frame = 0 

Query: 1   MLNDTSHYGINCKPDVISYSIIIDGLCKVGREEEAKGLFEEMKAQGM 48
           ML+  S YGI CKP +ISYSI+ID LCK  RE+EA  LF+EMKAQGM
Sbjct: 130 MLHGPSRYGIKCKPTIISYSIVIDALCKDRREDEASELFKEMKAQGM 176

[Close]
BLAST of MELO3C019437.2 vs. TAIR10
Match: AT2G17140.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 50.1 bits (118), Expect = 3.1e-06
Identity = 23/44 (52.27%), Postives = 29/44 (65.91%), Query Frame = 0 

Query: 2   LNDTSHYGINCKPDVISYSIIIDGLCKVGREEEAKGLFEEMKAQ 46
           L D S    NC PD+I+YS +++GLCK GR  EAK LF EM  +
Sbjct: 510 LVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGE 553

[Close]
BLAST of MELO3C019437.2 vs. TAIR10
Match: AT3G07290.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 45.1 bits (105), Expect = 1.0e-04
Identity = 19/33 (57.58%), Postives = 26/33 (78.79%), Query Frame = 0 

Query: 10  INCKPDVISYSIIIDGLCKVGREEEAKGLFEEM 43
           + C P+ +SYSI+I GLC+VGR EEA GL ++M
Sbjct: 260 VTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQM 292

[Close]
BLAST of MELO3C019437.2 vs. TAIR10
Match: AT1G20300.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 43.1 bits (100), Expect = 3.8e-04
Identity = 26/93 (27.96%), Postives = 43/93 (46.24%), Query Frame = 0 

Query: 3   NDTSHYGINCKPDVISYSIIIDGLCKVGREEEAKGLFEEMKAQGMIXXXXXXXXXXXXXX 62
           N    YG  C PD I++SI+I  L +  R  EA+  F+ +K +                 
Sbjct: 210 NRMEDYG--CVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDR----------------- 269

Query: 63  XXXXXNMVTFTLLIDMLCKEGKVFEAHKLFKVM 96
                +++ +T L+   C+ G++ EA K+FK M
Sbjct: 270 --FEPDVIVYTNLVRGWCRAGEISEAEKVFKEM 281

[Close]
BLAST of MELO3C019437.2 vs. Swiss-Prot
Match: sp|Q0WPZ6|PP158_ARATH (Pentatricopeptide repeat-containing protein At2g17140 OS=Arabidopsis thaliana OX=3702 GN=At2g17140 PE=2 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 5.6e-05
Identity = 23/44 (52.27%), Postives = 29/44 (65.91%), Query Frame = 0 

Query: 2   LNDTSHYGINCKPDVISYSIIIDGLCKVGREEEAKGLFEEMKAQ 46
           L D S    NC PD+I+YS +++GLCK GR  EAK LF EM  +
Sbjct: 510 LVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGE 553

[Close]
BLAST of MELO3C019437.2 vs. TrEMBL
Match: tr|A0A1S4E1M9|A0A1S4E1M9_CUCME (LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial OS=Cucumis melo OX=3656 GN=LOC107991456 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 3.2e-13
Identity = 69/100 (69.00%), Postives = 69/100 (69.00%), Query Frame = 0 

Query: 2   LNDTSHYGINCKPDVISYSIIIDGLCKVGREEEAKGLFEEMKAQGMIXXXXXXXXXXXXX 61
           LNDTSHYG                               EMKAQGMIXXXXXXXXXXXXX
Sbjct: 142 LNDTSHYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMKAQGMIXXXXXXXXXXXXX 201

Query: 62  XXXXXXNMVTFTLLIDMLCKEGKVFEAHKLFKVMIRKSII 102
           XXXXXXNMVTFTLLIDMLCKEGKVFEAHKLFKVMIRKSII
Sbjct: 202 XXXXXXNMVTFTLLIDMLCKEGKVFEAHKLFKVMIRKSII 241

[Close]
BLAST of MELO3C019437.2 vs. TrEMBL
Match: tr|A0A1S4DYL3|A0A1S4DYL3_CUCME (pentatricopeptide repeat-containing protein At1g63330-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103492587 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 1.5e-10
Identity = 36/48 (75.00%), Postives = 41/48 (85.42%), Query Frame = 0 

Query: 1   MLNDTSHYGINCKPDVISYSIIIDGLCKVGREEEAKGLFEEMKAQGMI 49
           MLN+TS YGIN KP V+SY+IIID LCK  RE+EA+ LFEEMKAQGMI
Sbjct: 227 MLNETSRYGINFKPIVVSYTIIIDALCKDRREDEARELFEEMKAQGMI 274

[Close]
BLAST of MELO3C019437.2 vs. TrEMBL
Match: tr|A0A1S4DYM0|A0A1S4DYM0_CUCME (pentatricopeptide repeat-containing protein At1g63080, mitochondrial-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492587 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 8.2e-09
Identity = 32/47 (68.09%), Postives = 37/47 (78.72%), Query Frame = 0 

Query: 1   MLNDTSHYGINCKPDVISYSIIIDGLCKVGREEEAKGLFEEMKAQGM 48
           ML+  S YGI CKP +ISYSI+ID LCK  RE+EA  LF+EMKAQGM
Sbjct: 207 MLHGPSRYGIKCKPTIISYSIVIDALCKDRREDEASELFKEMKAQGM 253

[Close]
BLAST of MELO3C019437.2 vs. TrEMBL
Match: tr|A0A1S4DYL1|A0A1S4DYL1_CUCME (pentatricopeptide repeat-containing protein At1g63330-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492587 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 8.2e-09
Identity = 32/47 (68.09%), Postives = 37/47 (78.72%), Query Frame = 0 

Query: 1   MLNDTSHYGINCKPDVISYSIIIDGLCKVGREEEAKGLFEEMKAQGM 48
           ML+  S YGI CKP +ISYSI+ID LCK  RE+EA  LF+EMKAQGM
Sbjct: 130 MLHGPSRYGIKCKPTIISYSIVIDALCKDRREDEASELFKEMKAQGM 176

[Close]
BLAST of MELO3C019437.2 vs. TrEMBL
Match: tr|A0A1S4DYM5|A0A1S4DYM5_CUCME (pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like isoform X4 OS=Cucumis melo OX=3656 GN=LOC103492587 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 8.2e-09
Identity = 32/47 (68.09%), Postives = 37/47 (78.72%), Query Frame = 0 

Query: 1  MLNDTSHYGINCKPDVISYSIIIDGLCKVGREEEAKGLFEEMKAQGM 48
          ML+  S YGI CKP +ISYSI+ID LCK  RE+EA  LF+EMKAQGM
Sbjct: 30 MLHGPSRYGIKCKPTIISYSIVIDALCKDRREDEASELFKEMKAQGM 76

The following BLAST results are available for this feature:
BLAST of MELO3C019437.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_016901890.14.8e-1369.00PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing pro... [more]
XP_011659252.11.3e-1074.47PREDICTED: pentatricopeptide repeat-containing protein At1g62914, mitochondrial-... [more]
XP_016901072.12.2e-1075.00PREDICTED: pentatricopeptide repeat-containing protein At1g63330-like isoform X3... [more]
XP_016901059.11.2e-0868.09PREDICTED: pentatricopeptide repeat-containing protein At1g63080, mitochondrial-... [more]
XP_016901071.11.2e-0868.09PREDICTED: pentatricopeptide repeat-containing protein At1g63330-like isoform X2... [more]
BLAST of MELO3C019437.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G17140.13.1e-0652.27Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G07290.11.0e-0457.58Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G20300.13.8e-0427.96Pentatricopeptide repeat (PPR) superfamily protein[more]
BLAST of MELO3C019437.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q0WPZ6|PP158_ARATH5.6e-0552.27Pentatricopeptide repeat-containing protein At2g17140 OS=Arabidopsis thaliana OX... [more]
BLAST of MELO3C019437.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S4E1M9|A0A1S4E1M9_CUCME3.2e-1369.00LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At1g12... [more]
tr|A0A1S4DYL3|A0A1S4DYL3_CUCME1.5e-1075.00pentatricopeptide repeat-containing protein At1g63330-like isoform X3 OS=Cucumis... [more]
tr|A0A1S4DYM0|A0A1S4DYM0_CUCME8.2e-0968.09pentatricopeptide repeat-containing protein At1g63080, mitochondrial-like isofor... [more]
tr|A0A1S4DYL1|A0A1S4DYL1_CUCME8.2e-0968.09pentatricopeptide repeat-containing protein At1g63330-like isoform X2 OS=Cucumis... [more]
tr|A0A1S4DYM5|A0A1S4DYM5_CUCME8.2e-0968.09pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like isofor... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C019437.2.1MELO3C019437.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 102..127
e-value: 2.7E-8
score: 33.3
coord: 287..319
e-value: 6.2E-6
score: 25.7
coord: 66..95
e-value: 4.5E-10
score: 39.0
coord: 133..165
e-value: 4.1E-11
score: 42.3
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 105..139
e-value: 1.0E-8
score: 32.8
coord: 294..320
e-value: 7.6E-4
score: 17.5
coord: 259..293
e-value: 3.0E-9
score: 34.5
coord: 17..51
e-value: 3.0E-10
score: 37.6
coord: 226..258
e-value: 1.1E-8
score: 32.7
coord: 190..222
e-value: 8.6E-4
score: 17.3
coord: 70..102
e-value: 1.0E-6
score: 26.5
coord: 142..167
e-value: 2.6E-5
score: 22.1
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 190..218
e-value: 2.6E-4
score: 20.9
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 14..62
e-value: 5.0E-16
score: 58.5
coord: 223..270
e-value: 3.9E-18
score: 65.2
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 68..102
score: 11.816
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 15..49
score: 13.439
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 103..137
score: 11.608
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 257..291
score: 14.074
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 222..256
score: 12.77
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 138..168
score: 10.545
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 187..221
score: 9.098
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 292..326
score: 8.364
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 171..327
e-value: 1.7E-42
score: 147.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 1..67
e-value: 8.2E-19
score: 69.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 68..170
e-value: 1.8E-30
score: 108.5
NoneNo IPR availablePANTHERPTHR44149FAMILY NOT NAMEDcoord: 66..167
NoneNo IPR availablePANTHERPTHR44149:SF3SUBFAMILY NOT NAMEDcoord: 12..65
coord: 167..321
NoneNo IPR availablePANTHERPTHR44149:SF3SUBFAMILY NOT NAMEDcoord: 66..167
NoneNo IPR availablePANTHERPTHR44149FAMILY NOT NAMEDcoord: 12..65
coord: 167..321

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C019437.2Cucumber (Gy14) v2cgybmedB215
MELO3C019437.2Cucumber (Gy14) v1cgymedB002
MELO3C019437.2Cucurbita maxima (Rimu)cmamedB346
MELO3C019437.2Cucurbita maxima (Rimu)cmamedB777
MELO3C019437.2Cucurbita moschata (Rifu)cmomedB332
MELO3C019437.2Cucurbita moschata (Rifu)cmomedB774
MELO3C019437.2Cucurbita pepo (Zucchini)cpemedB234
MELO3C019437.2Cucurbita pepo (Zucchini)cpemedB481
MELO3C019437.2Wild cucumber (PI 183967)cpimedB239
MELO3C019437.2Cucumber (Chinese Long) v2cumedB238
MELO3C019437.2Bottle gourd (USVL1VR-Ls)lsimedB384
MELO3C019437.2Watermelon (Charleston Gray)medwcgB417
MELO3C019437.2Watermelon (97103) v1medwmB448
MELO3C019437.2Silver-seed gourdcarmedB0042
MELO3C019437.2Silver-seed gourdcarmedB0661
MELO3C019437.2Cucumber (Chinese Long) v3cucmedB246
MELO3C019437.2Watermelon (97103) v2medwmbB424
MELO3C019437.2Wax gourdmedwgoB531