MELO3C019417 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C019417
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionPeptidyl-prolyl cis-trans isomerase
Locationchr6 : 9383912 .. 9384160 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTCTCAATAATTTCTCGAAGTCTTCCATGCCTCTCCAATTTGCTGTCGTCGTCATCTTCAACATTCGAAAACGCTGCCGTCGTCTTCAACATCCGCTGAAGCTTCGACGTCCGACCGAGTCAACGACGTCCGCCCACTTCTCTTTGTTGTATCAACCACGATGCCTCCTTCTCTTGATCGTCTTTCTCATTTTCCTTGTTTTCGCGCTCTTCACTCACAATCAAGTATGTTTTCTTCCCTTTTGA

mRNA sequence

ATGCCTCTCAATAATTTCTCGAAGTCTTCCATGCCTCTCCAATTTGCTGTCGTCGTCATCTTCAACATTCGAAAACGCTGCCGTCGTCTTCAACATCCGCTGAAGCTTCGACGTCCGACCGAGTCAACGACGTCCGCCCACTTCTCTTTGTTGTATCAACCACGATGCCTCCTTCTCTTGATCGTCTTTCTCATTTTCCTTGTTTTCGCGCTCTTCACTCACAATCAAGTATGTTTTCTTCCCTTTTGA

Coding sequence (CDS)

ATGCCTCTCAATAATTTCTCGAAGTCTTCCATGCCTCTCCAATTTGCTGTCGTCGTCATCTTCAACATTCGAAAACGCTGCCGTCGTCTTCAACATCCGCTGAAGCTTCGACGTCCGACCGAGTCAACGACGTCCGCCCACTTCTCTTTGTTGTATCAACCACGATGCCTCCTTCTCTTGATCGTCTTTCTCATTTTCCTTGTTTTCGCGCTCTTCACTCACAATCAAGTATGTTTTCTTCCCTTTTGA

Protein sequence

MPLNNFSKSSMPLQFAVVVIFNIRKRCRRLQHPLKLRRPTESTTSAHFSLLYQPRCLLLLIVFLIFLVFALFTHNQVCFLPF*
Homology
[Close]
BLAST of MELO3C019417 vs. TrEMBL
Match: A0A0A0LPN3_CUCSA (Peptidyl-prolyl cis-trans isomerase OS=Cucumis sativus GN=Csa_2G270140 PE=3 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 5.7e-06
Identity = 27/29 (93.10%), Postives = 27/29 (93.10%), Query Frame = 1 

Query: 48 FSLLYQPRCLLLLIVFLIFLVFALFTHNQ 77
          FSLLYQPRCLLL IVFLIFLVF LFTHNQ
Sbjct: 5  FSLLYQPRCLLLFIVFLIFLVFVLFTHNQ 33

[Close]
BLAST of MELO3C019417 vs. NCBI nr
Match: gi|659115673|ref|XP_008457675.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP19-4 [Cucumis melo])

HSP 1 Score: 61.2 bits (147), Expect = 9.6e-07
Identity = 29/29 (100.00%), Postives = 29/29 (100.00%), Query Frame = 1 

Query: 48 FSLLYQPRCLLLLIVFLIFLVFALFTHNQ 77
          FSLLYQPRCLLLLIVFLIFLVFALFTHNQ
Sbjct: 5  FSLLYQPRCLLLLIVFLIFLVFALFTHNQ 33

[Close]
BLAST of MELO3C019417 vs. NCBI nr
Match: gi|449458594|ref|XP_004147032.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP21-1 [Cucumis sativus])

HSP 1 Score: 58.2 bits (139), Expect = 8.2e-06
Identity = 27/29 (93.10%), Postives = 27/29 (93.10%), Query Frame = 1 

Query: 48 FSLLYQPRCLLLLIVFLIFLVFALFTHNQ 77
          FSLLYQPRCLLL IVFLIFLVF LFTHNQ
Sbjct: 5  FSLLYQPRCLLLFIVFLIFLVFVLFTHNQ 33

The following BLAST results are available for this feature:
BLAST of MELO3C019417 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LPN3_CUCSA5.7e-0693.10Peptidyl-prolyl cis-trans isomerase OS=Cucumis sativus GN=Csa_2G270140 PE=3 SV=1[more]
BLAST of MELO3C019417 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659115673|ref|XP_008457675.1|9.6e-07100.00PREDICTED: peptidyl-prolyl cis-trans isomerase CYP19-4 [Cucumis melo][more]
gi|449458594|ref|XP_004147032.1|8.2e-0693.10PREDICTED: peptidyl-prolyl cis-trans isomerase CYP21-1 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C019417T1MELO3C019417T1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C019417Cucurbita pepo (Zucchini)cpemeB192
MELO3C019417Cucurbita pepo (Zucchini)cpemeB412
MELO3C019417Bottle gourd (USVL1VR-Ls)lsimeB368
MELO3C019417Cucumber (Gy14) v2cgybmeB210
MELO3C019417Silver-seed gourdcarmeB0041
MELO3C019417Silver-seed gourdcarmeB0651
MELO3C019417Cucumber (Chinese Long) v3cucmeB247
MELO3C019417Watermelon (97103) v2mewmbB434
MELO3C019417Wax gourdmewgoB530
MELO3C019417Cucumber (Gy14) v1cgymeB002
MELO3C019417Cucurbita maxima (Rimu)cmameB298
MELO3C019417Cucurbita maxima (Rimu)cmameB691
MELO3C019417Cucurbita moschata (Rifu)cmomeB290
MELO3C019417Cucurbita moschata (Rifu)cmomeB683
MELO3C019417Wild cucumber (PI 183967)cpimeB241
MELO3C019417Cucumber (Chinese Long) v2cumeB166
MELO3C019417Watermelon (Charleston Gray)mewcgB427
MELO3C019417Watermelon (97103) v1mewmB461