MELO3C019388.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C019388.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	Envelope-like protein
Location	chr06 : 10080339 .. 10081070 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGAACACTCGAAAGGGTACTTATGCGGCGAAGTCTTCTAAAGACGTTCTTGAAACTCAAATTTTGAAGACATCCATGCATGGTGTGAGTATTGGAGGTCTTCGTTTCAAAAGTACTCCACTACAGAGACCTTATCGCCTTTTGTTAGAAAAATCACAGGCACATGTTTTCGACAGACTTTATGAGCCTGTGCAAGACGATGTTGATTCTCGAAATCCTGCGACAAATACTGAACATGCACCAGGTGCTCCTGAGAGTCATATGTCCAATATGGATTCAGATGACCTAGATGATGTTCCACTAGCCCGATTGTTAAAGAAGAATTTTGTTCTTGATGTTGTAGCTGAAAAATATATTGATCCTCCTATATCAGTTCATTCTTAGGAAAGCTCGTCTACTGAAGGTGTGTTTGTTCCTACCCCTAGCCTTCAACATACTTCAAATGTTGAACCAGGTCCATCACTTTACTCCTCTCCAGTTAGATCTTCCATTCCAAAAAATACTACTACATCTGGTCCGCATAATGACTCTGCACCTGCTTTTGCTGATGAGTCCATTGCAACCGAGGGAAGGACTGATGTTCATAATGGTGAAGACGAGGTTGAACCTGCCAATATTGGCGATCATACTGGTGAGATCTCCATTGATGACAATAATAACCCAGCTGCTCAACCTGAGACTCATGCATTTCTTGAGGAATCCAGGCCAACAAAGAAGAAATTTCAGTAG

mRNA sequence

ATGGTGAACACTCGAAAGGGTACTTATGCGGCGAAGTCTTCTAAAGACGTTCTTGAAACTCAAATTTTGAAGACATCCATGCATGGTGTGAGTATTGGAGGTCTTCGTTTCAAAAGTACTCCACTACAGAGACCTTATCGCCTTTTGTTAGAAAAATCACAGGCACATGTTTTCGACAGACTTTATGAGCCTGTGCAAGACGATGTTGATTCTCGAAATCCTGCGACAAATACTGAACATGCACCAGGTCCATCACTTTACTCCTCTCCAGTTAGATCTTCCATTCCAAAAAATACTACTACATCTGGTCCGCATAATGACTCTGCACCTGCTTTTGCTGATGAGTCCATTGCAACCGAGGGAAGGACTGATGTTCATAATGGTGAAGACGAGGTTGAACCTGCCAATATTGGCGATCATACTGGTGAGATCTCCATTGATGACAATAATAACCCAGCTGCTCAACCTGAGACTCATGCATTTCTTGAGGAATCCAGGCCAACAAAGAAGAAATTTCAGTAG

Coding sequence (CDS)

ATGGTGAACACTCGAAAGGGTACTTATGCGGCGAAGTCTTCTAAAGACGTTCTTGAAACTCAAATTTTGAAGACATCCATGCATGGTGTGAGTATTGGAGGTCTTCGTTTCAAAAGTACTCCACTACAGAGACCTTATCGCCTTTTGTTAGAAAAATCACAGGCACATGTTTTCGACAGACTTTATGAGCCTGTGCAAGACGATGTTGATTCTCGAAATCCTGCGACAAATACTGAACATGCACCAGGTCCATCACTTTACTCCTCTCCAGTTAGATCTTCCATTCCAAAAAATACTACTACATCTGGTCCGCATAATGACTCTGCACCTGCTTTTGCTGATGAGTCCATTGCAACCGAGGGAAGGACTGATGTTCATAATGGTGAAGACGAGGTTGAACCTGCCAATATTGGCGATCATACTGGTGAGATCTCCATTGATGACAATAATAACCCAGCTGCTCAACCTGAGACTCATGCATTTCTTGAGGAATCCAGGCCAACAAAGAAGAAATTTCAGTAG

Protein sequence

MVNTRKGTYAAKSSKDVLETQILKTSMHGVSIGGLRFKSTPLQRPYRLLLEKSQAHVFDRLYEPVQDDVDSRNPATNTEHAPGPSLYSSPVRSSIPKNTTTSGPHNDSAPAFADESIATEGRTDVHNGEDEVEPANIGDHTGEISIDDNNNPAAQPETHAFLEESRPTKKKFQ

Homology

[Close]

BLAST of MELO3C019388.2 vs. NCBI nr
Match: ADN33761.1 (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 159.5 bits (402), Expect = 1.1e-35
Identity = 109/244 (44.67%), Postives = 124/244 (50.82%), Query Frame = 0


Query: 1   MVNTRKGTYAAKSSKDVLETQILKTSMHGVSIGGLRFKSTPLQRPYRLLLEKSQAHVFDR 60
           M+NTRKGTY AKSS+D LE QIL TSMHG                         A+V  R
Sbjct: 1   MMNTRKGTYVAKSSEDGLEAQILTTSMHG-------------------------ANVSTR 60

Query: 61  LYEPVQDDVDSRNPATNTEHAP-------------------------------------- 120
           L++ V +DV+S+NP TN EH P                                      
Sbjct: 61  LHKLVPNDVNSQNPTTNAEHEPSAPKTHMYDMDSNDLDDVRLARLLKKTYVPNVAAGNSI 120

Query: 121 --------------------------------GPSLYSSPVRSSIPKNTTTSGPHNDSAP 174
                                           GPSLYSSPVRSS+P +TTTSG +N+SAP
Sbjct: 121 DPSVSSHSQESSSTEGVFVPTPGVQHTSNFKLGPSLYSSPVRSSVP-DTTTSGLNNNSAP 180

[Close]

BLAST of MELO3C019388.2 vs. NCBI nr
Match: XP_008466805.1 (PREDICTED: uncharacterized protein LOC103504128 [Cucumis melo])

HSP 1 Score: 103.2 bits (256), Expect = 9.0e-19
Identity = 82/199 (41.21%), Postives = 99/199 (49.75%), Query Frame = 0


Query: 1   MVNTRKGTYAAKSSKDVLETQILKTSMHGVSIGGLRFKSTPLQRPYRLLLEKSQAHVFDR 60
           MVNTRKGTY  KSSK+V E    K +MHG       F+        R  +   +AH+ D 
Sbjct: 1   MVNTRKGTYTGKSSKEVHEAPSPKATMHGPVQEDAGFEGAAKDAKTRSSV--FEAHLSDM 60

Query: 61  LYEPVQD---------DVDSRN---PATNTEHA----PGPSLYSSPVRSSIPKNTTTSGP 120
            ++ + D            S+    P     H     P PS YSSP+RSSIP  TTT+  
Sbjct: 61  DFDDLDDIPLALHSQGSSSSKGVFIPTPGFHHTSVIEPIPSHYSSPIRSSIPDKTTTTDS 120

Query: 121 HNDSAPAFADESIATEGRTDVHNGE------DEVEPANIGDHTGEISIDDNNNPAA---- 174
           H D A A  DES+ATEGRTDV + E      D VE  N  DH  + SIDDN +  A    
Sbjct: 121 HVDLARASVDESVATEGRTDVCDDEPPAGDDDVVESVNTDDHNDKFSIDDNVDQGAHNDS 180

[Close]

BLAST of MELO3C019388.2 vs. NCBI nr
Match: XP_008463658.1 (PREDICTED: uncharacterized protein LOC103501750 [Cucumis melo])

HSP 1 Score: 81.3 bits (199), Expect = 3.7e-12
Identity = 65/180 (36.11%), Postives = 84/180 (46.67%), Query Frame = 0


Query: 34  GLRFKSTPLQRPYRLLLEKSQAHVFDRLYEPVQDDVDSRNPATNTEHA------------ 93
           G RFK+TP +RPYRL  EKSQA V  RL E + + VDS NP +++ HA            
Sbjct: 3   GRRFKNTPPRRPYRLPSEKSQAEVSSRLSESMPETVDSPNPTSSSSHAPNIPETIVSDMD 62

Query: 94  ----------------------------PGPSLYSSPVRSSIPKNTTTSGPHNDSAPAFA 153
                                       PGPS++S  +RS I      S P+   A    
Sbjct: 63  SNDLDDESSSTEGVFVPTPGIHHTSNIQPGPSIHSPFIRSPI-SEPLPSKPNTAHAIVPG 122

Query: 154 DESIATEGRTDVHNGEDEVEPANIGDHTGEISIDDNNNPAAQPETHAFLEESRPTKKKFQ 174
           + SI    RTDV+N EDE+ P N   H+ E S   +NN  A P ++A   ES+P KKK Q
Sbjct: 123 EVSIEPLVRTDVYNDEDELNPPNPKVHSEEFSDVADNNLTASPASYAIPVESQPAKKKSQ 181

[Close]

BLAST of MELO3C019388.2 vs. NCBI nr
Match: XP_008454855.1 (PREDICTED: uncharacterized protein LOC103495162 [Cucumis melo])

HSP 1 Score: 68.2 bits (165), Expect = 3.2e-08
Identity = 58/185 (31.35%), Postives = 90/185 (48.65%), Query Frame = 0


Query: 1   MVNTRKGTYAAKSSKDVLETQILKTSMHGVSIGGLRFKSTPLQRPYRLLLEKSQAHVFDR 60
           MVNTRKGTY  KS+K+V E    +  +HG+ + G RFKST  +RPY+L  EK+ A++   
Sbjct: 1   MVNTRKGTY--KSTKEVPEPPSPRAVVHGIRVHGQRFKSTLPRRPYKLPSEKAHAYISSG 60

Query: 61  LYEPVQDDVDSRNPATNTEHAPGPS-----------LYSSPVRSSIPKNTTTSG-PHNDS 120
            +E + ++V   N   + E AP  S           L   P+   + K T  +  P N +
Sbjct: 61  SFELIHEEVVYGNVMKDAETAPAASEAHLSNMDSDDLDDVPLARLVKKVTAPNAVPKNVN 120

Query: 121 APAFADESIATEGRTDVHNGEDEVEPANIGDHTGEISIDDNNNPAAQPETHAFLEESRPT 174
               +D+S  +     V      +      DH  E+ + D+ + +AQ ET     E +P+
Sbjct: 121 DNVLSDQSQESSSSEGVFVPTPGLRQM---DHNEEVHVADSVDSSAQQETPLVSTEPKPS 180

[Close]

BLAST of MELO3C019388.2 vs. NCBI nr
Match: XP_008463460.1 (PREDICTED: uncharacterized protein LOC103501627 [Cucumis melo])

HSP 1 Score: 61.2 bits (147), Expect = 3.9e-06
Identity = 41/105 (39.05%), Postives = 55/105 (52.38%), Query Frame = 0


Query: 1   MVNTRKGTYAAKSSKDVLETQILKTSMHGVSIGGLRFKSTPLQRPYRLLLEKSQAHVFDR 60
           MVNTRKGTY  KSS++VLE    K ++HG+ +   RFKST  +RPY+L  +KS A +   
Sbjct: 1   MVNTRKGTYTDKSSEEVLEAPSPKATVHGIRVRERRFKSTLPRRPYKLPSKKSHADI--- 60

Query: 61  LYEPVQDDVDSRNPATNTEHAPGPSLYSSPVRSSIPKNTTTSGPH 106
                 DD+D    A   +    P        S IP N  ++ PH
Sbjct: 61  --PTNSDDLDDIPLAQLLKKVAAPD-------SPIPDNIASTDPH 93

[Close]

BLAST of MELO3C019388.2 vs. TrEMBL
Match: tr|E5GBC0|E5GBC0_CUCME (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 7.0e-36
Identity = 109/244 (44.67%), Postives = 124/244 (50.82%), Query Frame = 0


Query: 1   MVNTRKGTYAAKSSKDVLETQILKTSMHGVSIGGLRFKSTPLQRPYRLLLEKSQAHVFDR 60
           M+NTRKGTY AKSS+D LE QIL TSMHG                         A+V  R
Sbjct: 1   MMNTRKGTYVAKSSEDGLEAQILTTSMHG-------------------------ANVSTR 60

Query: 61  LYEPVQDDVDSRNPATNTEHAP-------------------------------------- 120
           L++ V +DV+S+NP TN EH P                                      
Sbjct: 61  LHKLVPNDVNSQNPTTNAEHEPSAPKTHMYDMDSNDLDDVRLARLLKKTYVPNVAAGNSI 120

Query: 121 --------------------------------GPSLYSSPVRSSIPKNTTTSGPHNDSAP 174
                                           GPSLYSSPVRSS+P +TTTSG +N+SAP
Sbjct: 121 DPSVSSHSQESSSTEGVFVPTPGVQHTSNFKLGPSLYSSPVRSSVP-DTTTSGLNNNSAP 180

[Close]

BLAST of MELO3C019388.2 vs. TrEMBL
Match: tr|A0A1S3CS40|A0A1S3CS40_CUCME (uncharacterized protein LOC103504128 OS=Cucumis melo OX=3656 GN=LOC103504128 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 5.9e-19
Identity = 82/199 (41.21%), Postives = 99/199 (49.75%), Query Frame = 0


Query: 1   MVNTRKGTYAAKSSKDVLETQILKTSMHGVSIGGLRFKSTPLQRPYRLLLEKSQAHVFDR 60
           MVNTRKGTY  KSSK+V E    K +MHG       F+        R  +   +AH+ D 
Sbjct: 1   MVNTRKGTYTGKSSKEVHEAPSPKATMHGPVQEDAGFEGAAKDAKTRSSV--FEAHLSDM 60

Query: 61  LYEPVQD---------DVDSRN---PATNTEHA----PGPSLYSSPVRSSIPKNTTTSGP 120
            ++ + D            S+    P     H     P PS YSSP+RSSIP  TTT+  
Sbjct: 61  DFDDLDDIPLALHSQGSSSSKGVFIPTPGFHHTSVIEPIPSHYSSPIRSSIPDKTTTTDS 120

Query: 121 HNDSAPAFADESIATEGRTDVHNGE------DEVEPANIGDHTGEISIDDNNNPAA---- 174
           H D A A  DES+ATEGRTDV + E      D VE  N  DH  + SIDDN +  A    
Sbjct: 121 HVDLARASVDESVATEGRTDVCDDEPPAGDDDVVESVNTDDHNDKFSIDDNVDQGAHNDS 180

[Close]

BLAST of MELO3C019388.2 vs. TrEMBL
Match: tr|A0A1S3CJS2|A0A1S3CJS2_CUCME (uncharacterized protein LOC103501750 OS=Cucumis melo OX=3656 GN=LOC103501750 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 2.4e-12
Identity = 65/180 (36.11%), Postives = 84/180 (46.67%), Query Frame = 0


Query: 34  GLRFKSTPLQRPYRLLLEKSQAHVFDRLYEPVQDDVDSRNPATNTEHA------------ 93
           G RFK+TP +RPYRL  EKSQA V  RL E + + VDS NP +++ HA            
Sbjct: 3   GRRFKNTPPRRPYRLPSEKSQAEVSSRLSESMPETVDSPNPTSSSSHAPNIPETIVSDMD 62

Query: 94  ----------------------------PGPSLYSSPVRSSIPKNTTTSGPHNDSAPAFA 153
                                       PGPS++S  +RS I      S P+   A    
Sbjct: 63  SNDLDDESSSTEGVFVPTPGIHHTSNIQPGPSIHSPFIRSPI-SEPLPSKPNTAHAIVPG 122

Query: 154 DESIATEGRTDVHNGEDEVEPANIGDHTGEISIDDNNNPAAQPETHAFLEESRPTKKKFQ 174
           + SI    RTDV+N EDE+ P N   H+ E S   +NN  A P ++A   ES+P KKK Q
Sbjct: 123 EVSIEPLVRTDVYNDEDELNPPNPKVHSEEFSDVADNNLTASPASYAIPVESQPAKKKSQ 181

[Close]

BLAST of MELO3C019388.2 vs. TrEMBL
Match: tr|A0A1S3BZ31|A0A1S3BZ31_CUCME (uncharacterized protein LOC103495162 OS=Cucumis melo OX=3656 GN=LOC103495162 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 2.1e-08
Identity = 58/185 (31.35%), Postives = 90/185 (48.65%), Query Frame = 0


Query: 1   MVNTRKGTYAAKSSKDVLETQILKTSMHGVSIGGLRFKSTPLQRPYRLLLEKSQAHVFDR 60
           MVNTRKGTY  KS+K+V E    +  +HG+ + G RFKST  +RPY+L  EK+ A++   
Sbjct: 1   MVNTRKGTY--KSTKEVPEPPSPRAVVHGIRVHGQRFKSTLPRRPYKLPSEKAHAYISSG 60

Query: 61  LYEPVQDDVDSRNPATNTEHAPGPS-----------LYSSPVRSSIPKNTTTSG-PHNDS 120
            +E + ++V   N   + E AP  S           L   P+   + K T  +  P N +
Sbjct: 61  SFELIHEEVVYGNVMKDAETAPAASEAHLSNMDSDDLDDVPLARLVKKVTAPNAVPKNVN 120

Query: 121 APAFADESIATEGRTDVHNGEDEVEPANIGDHTGEISIDDNNNPAAQPETHAFLEESRPT 174
               +D+S  +     V      +      DH  E+ + D+ + +AQ ET     E +P+
Sbjct: 121 DNVLSDQSQESSSSEGVFVPTPGLRQM---DHNEEVHVADSVDSSAQQETPLVSTEPKPS 180

[Close]

BLAST of MELO3C019388.2 vs. TrEMBL
Match: tr|A0A1S3CJR8|A0A1S3CJR8_CUCME (uncharacterized protein LOC103501627 OS=Cucumis melo OX=3656 GN=LOC103501627 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 2.6e-06
Identity = 41/105 (39.05%), Postives = 55/105 (52.38%), Query Frame = 0


Query: 1   MVNTRKGTYAAKSSKDVLETQILKTSMHGVSIGGLRFKSTPLQRPYRLLLEKSQAHVFDR 60
           MVNTRKGTY  KSS++VLE    K ++HG+ +   RFKST  +RPY+L  +KS A +   
Sbjct: 1   MVNTRKGTYTDKSSEEVLEAPSPKATVHGIRVRERRFKSTLPRRPYKLPSKKSHADI--- 60

Query: 61  LYEPVQDDVDSRNPATNTEHAPGPSLYSSPVRSSIPKNTTTSGPH 106
                 DD+D    A   +    P        S IP N  ++ PH
Sbjct: 61  --PTNSDDLDDIPLAQLLKKVAAPD-------SPIPDNIASTDPH 93

The following BLAST results are available for this feature:

BLAST of MELO3C019388.2 vs. NCBI nr


Match Name	E-value	Identity	Description
ADN33761.1	1.1e-35	44.67	hypothetical protein [Cucumis melo subsp. melo]	[more]
XP_008466805.1	9.0e-19	41.21	PREDICTED: uncharacterized protein LOC103504128 [Cucumis melo]	[more]
XP_008463658.1	3.7e-12	36.11	PREDICTED: uncharacterized protein LOC103501750 [Cucumis melo]	[more]
XP_008454855.1	3.2e-08	31.35	PREDICTED: uncharacterized protein LOC103495162 [Cucumis melo]	[more]
XP_008463460.1	3.9e-06	39.05	PREDICTED: uncharacterized protein LOC103501627 [Cucumis melo]	[more]

BLAST of MELO3C019388.2 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of MELO3C019388.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of MELO3C019388.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|E5GBC0\|E5GBC0_CUCME	7.0e-36	44.67	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
tr\|A0A1S3CS40\|A0A1S3CS40_CUCME	5.9e-19	41.21	uncharacterized protein LOC103504128 OS=Cucumis melo OX=3656 GN=LOC103504128 PE=...	[more]
tr\|A0A1S3CJS2\|A0A1S3CJS2_CUCME	2.4e-12	36.11	uncharacterized protein LOC103501750 OS=Cucumis melo OX=3656 GN=LOC103501750 PE=...	[more]
tr\|A0A1S3BZ31\|A0A1S3BZ31_CUCME	2.1e-08	31.35	uncharacterized protein LOC103495162 OS=Cucumis melo OX=3656 GN=LOC103495162 PE=...	[more]
tr\|A0A1S3CJR8\|A0A1S3CJR8_CUCME	2.6e-06	39.05	uncharacterized protein LOC103501627 OS=Cucumis melo OX=3656 GN=LOC103501627 PE=...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C019388.2.1	MELO3C019388.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 123..173
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 123..137

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C019388.2	Cucumber (Chinese Long) v3	cucmedB246
MELO3C019388.2	Watermelon (97103) v2	medwmbB424
MELO3C019388.2	Wax gourd	medwgoB531
MELO3C019388.2	Cucumber (Gy14) v2	cgybmedB215
MELO3C019388.2	Cucumber (Gy14) v1	cgymedB002
MELO3C019388.2	Wild cucumber (PI 183967)	cpimedB239
MELO3C019388.2	Cucumber (Chinese Long) v2	cumedB238
MELO3C019388.2	Bottle gourd (USVL1VR-Ls)	lsimedB384
MELO3C019388.2	Watermelon (Charleston Gray)	medwcgB417
MELO3C019388.2	Watermelon (97103) v1	medwmB448