MELO3C019386 (gene) Melon (DHL92) v3.5.1

NameMELO3C019386
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionGTPase-activating protein
Locationchr6 : 8945316 .. 8945483 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCGCCTCCGGCACCGACATCTCCTCTTCCTTCGGCGTCGCCGGCGTCGGTGGCGGCCTCTTCTCCCGTTTGATGGCCACTACACGCCCCAATGCAGCCGTCGCCTTCACGGCCTTGGCCGGCCTCGCTGTGGTCGCCGTTCTCTTCTACTCCGCCAGTAGGTAA

mRNA sequence

ATGATCGCCTCCGGCACCGACATCTCCTCTTCCTTCGGCGTCGCCGGCGTCGGTGGCGGCCTCTTCTCCCGTTTGATGGCCACTACACGCCCCAATGCAGCCGTCGCCTTCACGGCCTTGGCCGGCCTCGCTGTGGTCGCCGTTCTCTTCTACTCCGCCAGTAGGTAA

Coding sequence (CDS)

ATGATCGCCTCCGGCACCGACATCTCCTCTTCCTTCGGCGTCGCCGGCGTCGGTGGCGGCCTCTTCTCCCGTTTGATGGCCACTACACGCCCCAATGCAGCCGTCGCCTTCACGGCCTTGGCCGGCCTCGCTGTGGTCGCCGTTCTCTTCTACTCCGCCAGTAGGTAA

Protein sequence

MIASGTDISSSFGVAGVGGGLFSRLMATTRPNAAVAFTALAGLAVVAVLFYSASR*
BLAST of MELO3C019386 vs. TrEMBL
Match: A0A0A0L793_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G238090 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 2.7e-20
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 1

Query: 1  MIASGTDISSSFGVAGVGGGLFSRLMATTRPNAAVAFTALAGLAVVAVLFYSASR 56
          MIASGTDISSSFGVAGVGGGLFSRLMATTRPNAAVAFTALAGLAVVAVLFYSASR
Sbjct: 1  MIASGTDISSSFGVAGVGGGLFSRLMATTRPNAAVAFTALAGLAVVAVLFYSASR 55

BLAST of MELO3C019386 vs. NCBI nr
Match: gi|778680382|ref|XP_011651302.1| (PREDICTED: small G protein signaling modulator 1 isoform X2 [Cucumis sativus])

HSP 1 Score: 105.1 bits (261), Expect = 3.9e-20
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 1

Query: 1  MIASGTDISSSFGVAGVGGGLFSRLMATTRPNAAVAFTALAGLAVVAVLFYSASR 56
          MIASGTDISSSFGVAGVGGGLFSRLMATTRPNAAVAFTALAGLAVVAVLFYSASR
Sbjct: 1  MIASGTDISSSFGVAGVGGGLFSRLMATTRPNAAVAFTALAGLAVVAVLFYSASR 55

BLAST of MELO3C019386 vs. NCBI nr
Match: gi|659111972|ref|XP_008456003.1| (PREDICTED: TBC1 domain family member 15-like isoform X2 [Cucumis melo])

HSP 1 Score: 105.1 bits (261), Expect = 3.9e-20
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 1

Query: 1  MIASGTDISSSFGVAGVGGGLFSRLMATTRPNAAVAFTALAGLAVVAVLFYSASR 56
          MIASGTDISSSFGVAGVGGGLFSRLMATTRPNAAVAFTALAGLAVVAVLFYSASR
Sbjct: 1  MIASGTDISSSFGVAGVGGGLFSRLMATTRPNAAVAFTALAGLAVVAVLFYSASR 55

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0L793_CUCSA2.7e-20100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G238090 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|778680382|ref|XP_011651302.1|3.9e-20100.00PREDICTED: small G protein signaling modulator 1 isoform X2 [Cucumis sativus][more]
gi|659111972|ref|XP_008456003.1|3.9e-20100.00PREDICTED: TBC1 domain family member 15-like isoform X2 [Cucumis melo][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU46357melon EST collection version 4.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C019386T1MELO3C019386T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU46357MU46357transcribed_cluster


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None