MELO3C019274 (gene) Melon (DHL92) v3.5.1

NameMELO3C019274
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionHTH-type transcriptional regulator NorG
Locationchr11 : 10528387 .. 10529151 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTGGAAGTGCTTCAACTAATTTCTCGGACGTCATAACAATTGGGGAGAGGATTGAATTTGGAGTGAAAAATGGAAGGATCACTGATTCTTCTTCAGAGACAAGAAGGATGATGACCCCAAAGAAAAAAGAGGAAGAAATACATGAGTTGAGCTCAACTCAAAGAGTAGTGCATGTATTCTCACCAAATGTGGGGCAGACAAATTACTCTCCTAGTTATCAGAATGAAGGTAAAAGTCCATTTTGTCAGGCAACTCAGAGAAACGCGAGGAGCAATTGGAAGCAAACCCATTTTGATCTCATACCTATGTCATATACAAAGCTTTTGCCTCAACTTTTAAAGAGTCGTCAAGTAGCTATCGTACCATAAGAGCCTTTGCAACCATCATATCGTAACTGGTATGACCCCAACGCAAAATGTGAATATCACACTGGGGCAGTTGGGAATTCTACGGAGAATTGTTTTCCTTTGGAAGCTAAAGTGCAAAGTCTAGTCAAGGCCAAATGGTTGAAATTCAAGAAAACAGGAGAAGAGCCTGACGTTAACCAGAACCCTTTACCAAATAATGAGGGTCCCACCATAAATGTTGTTGACACATTCAAAGAAAGATACAAGAATGAGGTGTGTGATGTGACTACTTCAATGAATGCACTTTTCCAAATCCTTCATGGAGCTGGATATTTGTCACCAAGGTTTAACAATGATGAGGGGAGAAGTTTGGATGTGCCAACGAGAAGCAGTGTTTATTCCACCCTGAGATAG

mRNA sequence

ATGGTTGGAAGTGCTTCAACTAATTTCTCGGACGTCATAACAATTGGGGAGAGGATTGAATTTGGAGTGAAAAATGGAAGGATCACTGATTCTTCTTCAGAGACAAGAAGGATGATGACCCCAAAGAAAAAAGAGGAAGAAATACATGAGTTGAGCTCAACTCAAAGAGTAGTGCATGTATTCTCACCAAATGTGGGGCAGACAAATTACTCTCCTAGTTATCAGAATGAAGTTGGGAATTCTACGGAGAATTGTTTTCCTTTGGAAGCTAAAGTGCAAAGTCTAGTCAAGGCCAAATGGTTGAAATTCAAGAAAACAGGAGAAGAGCCTGACGTTAACCAGAACCCTTTACCAAATAATGAGGGTCCCACCATAAATGTTGTTGACACATTCAAAGAAAGATACAAGAATGAGGTGTGTGATGTGACTACTTCAATGAATGCACTTTTCCAAATCCTTCATGGAGCTGGATATTTGTCACCAAGGTTTAACAATGATGAGGGGAGAAGTTTGGATGTGCCAACGAGAAGCAGTGTTTATTCCACCCTGAGATAG

Coding sequence (CDS)

ATGGTTGGAAGTGCTTCAACTAATTTCTCGGACGTCATAACAATTGGGGAGAGGATTGAATTTGGAGTGAAAAATGGAAGGATCACTGATTCTTCTTCAGAGACAAGAAGGATGATGACCCCAAAGAAAAAAGAGGAAGAAATACATGAGTTGAGCTCAACTCAAAGAGTAGTGCATGTATTCTCACCAAATGTGGGGCAGACAAATTACTCTCCTAGTTATCAGAATGAAGTTGGGAATTCTACGGAGAATTGTTTTCCTTTGGAAGCTAAAGTGCAAAGTCTAGTCAAGGCCAAATGGTTGAAATTCAAGAAAACAGGAGAAGAGCCTGACGTTAACCAGAACCCTTTACCAAATAATGAGGGTCCCACCATAAATGTTGTTGACACATTCAAAGAAAGATACAAGAATGAGGTGTGTGATGTGACTACTTCAATGAATGCACTTTTCCAAATCCTTCATGGAGCTGGATATTTGTCACCAAGGTTTAACAATGATGAGGGGAGAAGTTTGGATGTGCCAACGAGAAGCAGTGTTTATTCCACCCTGAGATAG

Protein sequence

MVGSASTNFSDVITIGERIEFGVKNGRITDSSSETRRMMTPKKKEEEIHELSSTQRVVHVFSPNVGQTNYSPSYQNEVGNSTENCFPLEAKVQSLVKAKWLKFKKTGEEPDVNQNPLPNNEGPTINVVDTFKERYKNEVCDVTTSMNALFQILHGAGYLSPRFNNDEGRSLDVPTRSSVYSTLR*
BLAST of MELO3C019274 vs. TrEMBL
Match: A0A061FQT3_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_044564 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 2.2e-13
Identity = 57/202 (28.22%), Postives = 99/202 (49.01%), Query Frame = 1

Query: 1   MVGSASTNFSDVITIGERIEFGVKNGRITDSS-SETRRMMTPKKKEEEIHELSSTQRVVH 60
           ++G+A+ NF+D++  GE I+  +K+G+I     + +++  T KKKE ++  ++   +  H
Sbjct: 197 LIGNATKNFTDLVLSGEIIKGAIKSGKIEGHEVANSKKGNTSKKKEGDVQAVAHDNQQAH 256

Query: 61  VFSP---------------NVGQTNY------SPSYQNEV------------------GN 120
            F+P               N+ Q  Y       P++Q  V                  G+
Sbjct: 257 NFNPYYPYPPYQPFYPNIGNITQNPYVYQPTPQPTFQTNVLPQTPPSRPVASTNNPGHGH 316

Query: 121 STENCFPLEAKVQSLVKAKWLKFKKTGEEPDVNQNPLPNNEGPTINVV-DTFKERYKNEV 162
           STENC  L+ KVQ+L+KA  L F K  +   V+ NPLPN+  PT+N + +    R K  +
Sbjct: 317 STENCITLKHKVQALIKAGLLNFAKK-DSSSVDGNPLPNHGRPTVNAIHEGMIRRVKKSI 376

BLAST of MELO3C019274 vs. TrEMBL
Match: A0A061FPX5_THECC (Gag-pro-like protein OS=Theobroma cacao GN=TCM_044454 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 5.3e-12
Identity = 62/192 (32.29%), Postives = 96/192 (50.00%), Query Frame = 1

Query: 1   MVGSASTNFSDVITIGERIEFGVKNGRI-TDSSSETRRMMTPKKKEEEIHELSSTQRVVH 60
           +VGSA  NF+D++  GE IE  +K G+I    ++ T++  T KK+E E   ++S Q    
Sbjct: 439 LVGSAIKNFADMVISGEMIETAIKQGKIERGDTANTKKGGTFKKREGEAQAITSGQPQGG 498

Query: 61  VFSPNVGQTNYSPSY--------------QNEVGNSTENCFPLEAKVQSLVKAKWLKFKK 120
            ++P      Y P Y                  G+S ENC   + KVQ L+KA  L F+K
Sbjct: 499 SYNPYQPYPPY-PYYPVRWYDASAHCDYHYGIEGHSIENCTTFKHKVQGLIKAGILNFEK 558

Query: 121 TGEEPDVNQNPLPNNEGPTINVVDTFKERYKNEVCDVTTSMNALFQILHGAGYL---SPR 175
             +E +VN NPLPN+ G  +N ++  +   K  + +V T M  +F+ L  A  L   S R
Sbjct: 559 K-QEQNVNNNPLPNHTGAGVNAIEG-EMNVKKNIPEVETPMEKVFEALVKACMLEVWSKR 618

BLAST of MELO3C019274 vs. TrEMBL
Match: M1B273_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400013592 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 7.7e-11
Identity = 44/144 (30.56%), Postives = 74/144 (51.39%), Query Frame = 1

Query: 9   FSDVITIGERIEFGVKNGRITDSSSETRRMMTPKKKEEEIHELS-----------STQRV 68
           F++++ +GE IE G++ G+I   ++  R     KKK E++  +S           S Q  
Sbjct: 30  FAEIVKVGETIEDGLRTGKIARVAASPRSSSLLKKKREDVSSISYEGKKTLRKSSSYQGY 89

Query: 69  VHVFSPNVGQTN---YSPS-----YQNEVGNSTENCFPLEAKVQSLVKAKWLKFKKTGEE 128
           +H   P    T+   Y P      + N VG+ TE+C  L+ K+Q L+    +  +     
Sbjct: 90  IHPVGPKPVDTSSRFYRPDQRCACHSNSVGHDTEDCVNLKHKIQDLIDQNVVSLQTVA-- 149

Query: 129 PDVNQNPLPNNEGPTINVVDTFKE 134
           P+VN NPLPN+ G TIN+++T+ +
Sbjct: 150 PNVNSNPLPNHGGATINMIETYDD 171

BLAST of MELO3C019274 vs. TrEMBL
Match: A0A151UFQ0_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_047908 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 9.4e-09
Identity = 47/134 (35.07%), Postives = 72/134 (53.73%), Query Frame = 1

Query: 4   SASTNFSDVITIGERIEFGVKNGRITDS-SSETRRMMTPKKKEEEIHELSSTQRVVHVFS 63
           + ST F+D++TIGERIE G+K+G+I  + +S   R +  KK+EE +H + ST +      
Sbjct: 99  NTSTLFADIVTIGERIEQGLKSGKIGKAPTSYDPRKVYEKKREEGVHAVISTPKSQATPQ 158

Query: 64  ----PNVGQTN--YSPSYQ---------NEVGNSTENCFPLEAKVQSLVKAKWLKFKKTG 122
               P   + N  Y P Y+         N  G+S E C  L+ +VQ L+ A WLKF    
Sbjct: 159 AKPLPPTKKMNPPYPPWYKPEERCDYHSNSPGHSVERCKTLQFRVQGLIDAGWLKFDT-- 218

BLAST of MELO3C019274 vs. TrEMBL
Match: A0A0L9VSW4_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan11g120500 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 3.0e-07
Identity = 36/81 (44.44%), Postives = 48/81 (59.26%), Query Frame = 1

Query: 1   MVGSASTNFSDVITIGERIEFGVKNGRITDSSSETRRMMTP-----KKKEEEIHELSS-- 60
           MVG+ S NF+D+I IGERIE GVK+G+I  SS  T     P     KKKE ++H +S+  
Sbjct: 334 MVGNVSANFADIIIIGERIEIGVKSGKIAYSSPATANYKKPNFNTGKKKEGDVHAVSAMP 393

Query: 61  ---TQRVVHVFSPNVGQTNYS 72
              +Q   H F P +GQ  Y+
Sbjct: 394 VWRSQAPTHSFRPYLGQPPYA 414

BLAST of MELO3C019274 vs. NCBI nr
Match: gi|659122237|ref|XP_008461036.1| (PREDICTED: uncharacterized protein LOC103499741 [Cucumis melo])

HSP 1 Score: 221.9 bits (564), Expect = 9.5e-55
Identity = 123/184 (66.85%), Postives = 132/184 (71.74%), Query Frame = 1

Query: 1   MVGSASTNFSDVITIGERIEFGVKNGRITDSSSETRRMMTPKKKEEEIHELSSTQRVVHV 60
           MVGSASTNFSDVITI ERIEFGVKNG+I DSSSE RRMMT KKK E+  +L       H 
Sbjct: 274 MVGSASTNFSDVITIEERIEFGVKNGKIIDSSSERRRMMTSKKKWEKYTKLLPQLLKSHQ 333

Query: 61  FSPNVGQTNYSPSYQN-------------EVGNSTENCFPLEAKVQSLVKAKWLKFKKTG 120
            +  V Q    P Y                VG+S ENCFPL+AKVQSLVKA WLKFKKTG
Sbjct: 334 VAI-VPQEPLQPPYPKWYDPNARCEYHAGTVGHSIENCFPLKAKVQSLVKAGWLKFKKTG 393

Query: 121 EEPDVNQNPLPNNEGPTINVVDTFKERYKNEVCDVTTSMNALFQILHGAGYLSPRFNNDE 172
           EE DVNQNPLPN+EGP INVVDTF ER KN V  VTTSMN LFQILHGAGYLSPRFNND+
Sbjct: 394 EELDVNQNPLPNHEGPAINVVDTFTERNKNMVSGVTTSMNTLFQILHGAGYLSPRFNNDD 453

BLAST of MELO3C019274 vs. NCBI nr
Match: gi|659125951|ref|XP_008462935.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103501197 [Cucumis melo])

HSP 1 Score: 124.4 bits (311), Expect = 2.1e-25
Identity = 80/217 (36.87%), Postives = 114/217 (52.53%), Query Frame = 1

Query: 1   MVGSASTNFSDVITIGERIEFGVKNGRITDSS--SETRRMMT------------------ 60
           M+G+ASTNFSD+I IGERIE+G+K+G    +   SET + +                   
Sbjct: 279 MIGNASTNFSDIIVIGERIEYGIKHGSYVPAHTVSETPKPVNSNSPRPFVQSQGSKTNSD 338

Query: 61  -----PKKKEEEIHELSSTQRVVHV-------FSPNVGQTNYSPSYQNE-VGNSTENCFP 120
                P    E + +L   +++  +         P    +N    Y  E + +STENC  
Sbjct: 339 TWRFDPISMTELLPQLIQNRQLAPIPMIPIQPSYPKWYDSNARCDYHAEGMRHSTENCLA 398

Query: 121 LEAKVQSLVKAKWLKFKKTGEEPDVNQNPLPNNEGPTINVVDTFKERYKNEVCDVTTSMN 180
           L+ KVQSL+ A WL FKK+GE+P+VN+NPLP++E P +N VD+  E+ KNEV ++   M 
Sbjct: 399 LKRKVQSLINAGWLSFKKSGEKPNVNENPLPDHENPKVNAVDSLVEKCKNEVHEIVMPME 458

Query: 181 ALFQILHGAGYLSPRFNNDEGRSLDVPTRSSVYSTLR 185
           ALF+ L  AGY+  R    E R+L  P     Y   R
Sbjct: 459 ALFEGLFEAGYVEKREKKCE-RALQRPRCGDAYHCKR 494

BLAST of MELO3C019274 vs. NCBI nr
Match: gi|659129309|ref|XP_008464622.1| (PREDICTED: uncharacterized protein LOC103502461 [Cucumis melo])

HSP 1 Score: 99.8 bits (247), Expect = 5.5e-18
Identity = 50/101 (49.50%), Postives = 69/101 (68.32%), Query Frame = 1

Query: 78  VGNSTENCFPLEAKVQSLVKAKWLKFKKTGEEPDVNQNPLPNNEGPTINVVDTFKERYKN 137
           VG+STENC  L+ KVQSL+ A WL FKK+GE+P+VN+NPL ++E P +NVVD+  E+ K+
Sbjct: 399 VGHSTENCLALKRKVQSLINAGWLSFKKSGEKPNVNENPLSDHENPKVNVVDSLVEKCKS 458

Query: 138 EVCDVTTSMNALFQILHGAGYLSPRFNND----EGRSLDVP 175
           EV ++   M ALF+ L  AGY+S  + +     EG   D P
Sbjct: 459 EVHEIVMPMEALFEGLFEAGYVSHEYLDPNIRYEGNQRDNP 499

BLAST of MELO3C019274 vs. NCBI nr
Match: gi|659102853|ref|XP_008452348.1| (PREDICTED: uncharacterized protein LOC103493407 [Cucumis melo])

HSP 1 Score: 95.9 bits (237), Expect = 7.9e-17
Identity = 50/54 (92.59%), Postives = 50/54 (92.59%), Query Frame = 1

Query: 1   MVGSASTNFSDVITIGERIEFGVKNGRITDSSSETRRMMTPKKKEEEIHELSST 55
           MVGSASTNFSDVI IGERIEFGVKN RITD SSETRRMMT KKKEEEIHELSST
Sbjct: 294 MVGSASTNFSDVIRIGERIEFGVKNERITDFSSETRRMMTLKKKEEEIHELSST 347

BLAST of MELO3C019274 vs. NCBI nr
Match: gi|659130442|ref|XP_008465174.1| (PREDICTED: uncharacterized protein LOC103502838 [Cucumis melo])

HSP 1 Score: 93.2 bits (230), Expect = 5.1e-16
Identity = 47/51 (92.16%), Postives = 47/51 (92.16%), Query Frame = 1

Query: 1   MVGSASTNFSDVITIGERIEFGVKNGRITDSSSETRRMMTPKKKEEEIHEL 52
           MVGSASTNFSDVITIGE IEFGVKNGRI D SSE RRMMTPKKKEEEIHEL
Sbjct: 287 MVGSASTNFSDVITIGEMIEFGVKNGRIFDPSSEIRRMMTPKKKEEEIHEL 337

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A061FQT3_THECC2.2e-1328.22Uncharacterized protein OS=Theobroma cacao GN=TCM_044564 PE=4 SV=1[more]
A0A061FPX5_THECC5.3e-1232.29Gag-pro-like protein OS=Theobroma cacao GN=TCM_044454 PE=4 SV=1[more]
M1B273_SOLTU7.7e-1130.56Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400013592 PE=4 SV=1[more]
A0A151UFQ0_CAJCA9.4e-0935.07Uncharacterized protein OS=Cajanus cajan GN=KK1_047908 PE=4 SV=1[more]
A0A0L9VSW4_PHAAN3.0e-0744.44Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan11g120500 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|659122237|ref|XP_008461036.1|9.5e-5566.85PREDICTED: uncharacterized protein LOC103499741 [Cucumis melo][more]
gi|659125951|ref|XP_008462935.1|2.1e-2536.87PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103501197 [Cucumis me... [more]
gi|659129309|ref|XP_008464622.1|5.5e-1849.50PREDICTED: uncharacterized protein LOC103502461 [Cucumis melo][more]
gi|659102853|ref|XP_008452348.1|7.9e-1792.59PREDICTED: uncharacterized protein LOC103493407 [Cucumis melo][more]
gi|659130442|ref|XP_008465174.1|5.1e-1692.16PREDICTED: uncharacterized protein LOC103502838 [Cucumis melo][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C019274T1MELO3C019274T1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C019274Cucurbita pepo (Zucchini)cpemeB257
MELO3C019274Cucurbita pepo (Zucchini)cpemeB599
MELO3C019274Cucurbita pepo (Zucchini)cpemeB667
MELO3C019274Bottle gourd (USVL1VR-Ls)lsimeB053
MELO3C019274Bottle gourd (USVL1VR-Ls)lsimeB088
MELO3C019274Cucumber (Gy14) v2cgybmeB083
MELO3C019274Cucumber (Gy14) v2cgybmeB395
MELO3C019274Cucumber (Gy14) v2cgybmeB452
MELO3C019274Silver-seed gourdcarmeB0030
MELO3C019274Silver-seed gourdcarmeB0341
MELO3C019274Silver-seed gourdcarmeB0863
MELO3C019274Cucumber (Chinese Long) v3cucmeB103
MELO3C019274Cucumber (Chinese Long) v3cucmeB457
MELO3C019274Cucumber (Chinese Long) v3cucmeB532
MELO3C019274Watermelon (97103) v2mewmbB083
MELO3C019274Watermelon (97103) v2mewmbB092
MELO3C019274Wax gourdmewgoB107
MELO3C019274Wax gourdmewgoB126
MELO3C019274Wax gourdmewgoB140
MELO3C019274Melon (DHL92) v3.5.1memeB039
MELO3C019274Melon (DHL92) v3.5.1memeB057
MELO3C019274Cucumber (Gy14) v1cgymeB014
MELO3C019274Cucumber (Gy14) v1cgymeB072
MELO3C019274Cucumber (Gy14) v1cgymeB246
MELO3C019274Cucurbita maxima (Rimu)cmameB087
MELO3C019274Cucurbita maxima (Rimu)cmameB451
MELO3C019274Cucurbita maxima (Rimu)cmameB502
MELO3C019274Cucurbita maxima (Rimu)cmameB533
MELO3C019274Cucurbita moschata (Rifu)cmomeB080
MELO3C019274Cucurbita moschata (Rifu)cmomeB443
MELO3C019274Cucurbita moschata (Rifu)cmomeB482
MELO3C019274Cucurbita moschata (Rifu)cmomeB523
MELO3C019274Cucurbita moschata (Rifu)cmomeB768
MELO3C019274Wild cucumber (PI 183967)cpimeB096
MELO3C019274Wild cucumber (PI 183967)cpimeB445
MELO3C019274Wild cucumber (PI 183967)cpimeB520
MELO3C019274Cucumber (Chinese Long) v2cumeB097
MELO3C019274Cucumber (Chinese Long) v2cumeB454
MELO3C019274Cucumber (Chinese Long) v2cumeB516
MELO3C019274Watermelon (Charleston Gray)mewcgB086
MELO3C019274Watermelon (Charleston Gray)mewcgB090
MELO3C019274Watermelon (Charleston Gray)mewcgB092
MELO3C019274Watermelon (97103) v1mewmB103
MELO3C019274Watermelon (97103) v1mewmB124
MELO3C019274Watermelon (97103) v1mewmB130