MELO3C019259 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C019259
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionAcidic phospholipase A2 1
Locationchr11 : 10129038 .. 10129391 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCAAAAACAAAAATGTTGATCAGTCTGAAAAGAAAAAAGCACTATCTACGGGCAATCCATCTGAAAGGGATATCGAAGTTGTATGCTCCGACAATCCTGTGTCGAAGCAGGCACAACTTTCATCCTCATTACACAATGAAGCACTACCTAGTTCAAGTGAGGTTTTTGGAACAGAAGGGTGGAACCCTTTCAACTTCAAGGGCAAAGAGATATCCATGACGGATGAAAATAATATTGGAATGATGTTGAAATTGCTCCTTGAAGAAAGTAACAAAAGAAAAAAAGTGAGAGAAGAAGTTGAAAAGAAAAAGAAAGAAGATGACAAAAAAGCGAGGAAAGCAAGGATTTAG

mRNA sequence

ATGGCCAAAAACAAAAATGTTGATCAGTCTGAAAAGAAAAAAGCACTATCTACGGGCAATCCATCTGAAAGGGATATCGAAGTTGTATGCTCCGACAATCCTGTGTCGAAGCAGGCACAACTTTCATCCTCATTACACAATGAAGCACTACCTAGTTCAAGTGAGGTTTTTGGAACAGAAGGGTGGAACCCTTTCAACTTCAAGGGCAAAGAGATATCCATGACGGATGAAAATAATATTGGAATGATGTTGAAATTGCTCCTTGAAGAAAGTAACAAAAGAAAAAAAGTGAGAGAAGAAGTTGAAAAGAAAAAGAAAGAAGATGACAAAAAAGCGAGGAAAGCAAGGATTTAG

Coding sequence (CDS)

ATGGCCAAAAACAAAAATGTTGATCAGTCTGAAAAGAAAAAAGCACTATCTACGGGCAATCCATCTGAAAGGGATATCGAAGTTGTATGCTCCGACAATCCTGTGTCGAAGCAGGCACAACTTTCATCCTCATTACACAATGAAGCACTACCTAGTTCAAGTGAGGTTTTTGGAACAGAAGGGTGGAACCCTTTCAACTTCAAGGGCAAAGAGATATCCATGACGGATGAAAATAATATTGGAATGATGTTGAAATTGCTCCTTGAAGAAAGTAACAAAAGAAAAAAAGTGAGAGAAGAAGTTGAAAAGAAAAAGAAAGAAGATGACAAAAAAGCGAGGAAAGCAAGGATTTAG

Protein sequence

MAKNKNVDQSEKKKALSTGNPSERDIEVVCSDNPVSKQAQLSSSLHNEALPSSSEVFGTEGWNPFNFKGKEISMTDENNIGMMLKLLLEESNKRKKVREEVEKKKKEDDKKARKARI*
Homology
[Close]
BLAST of MELO3C019259 vs. TrEMBL
Match: A0A0A0KJ97_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G026440 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 8.6e-16
Identity = 52/107 (48.60%), Postives = 70/107 (65.42%), Query Frame = 1 

Query: 1   MAKNKNVDQSEKKKALSTGNPSERDIEVVCSDNPVSKQAQLSSSLHNEALPSSSEVFGTE 60
           MAKN   +  EKKK         ++ +VVC D PVS+QAQ  S+   E + +SSEV  TE
Sbjct: 1   MAKNNESEHFEKKKV-------RKNTKVVCFDGPVSEQAQHDSTPQTETMRNSSEVLETE 60

Query: 61  GWNPFNFKGKEISMTDENNIGMMLKLLLEESNKRKKVREEVEKKKKE 108
           GWNPF F+  EIS+TDE NIG   K+LL++ N+R + +E VE+K+KE
Sbjct: 61  GWNPFKFQWMEISITDE-NIG---KMLLDKRNRRGRAKEGVEEKQKE 96

[Close]
BLAST of MELO3C019259 vs. TrEMBL
Match: A0A0A0LBL2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G427420 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 3.6e-14
Identity = 49/101 (48.51%), Postives = 70/101 (69.31%), Query Frame = 1 

Query: 19  GNPSERDIEVVCSDNPVSKQAQLSSSLHNEA--LPSSSEVFGTEGWNPFNFKGKEISMTD 78
           G+ SERD         VS+QAQ++   +NE   L  SSE+FG EG+N FNF G+EI +T 
Sbjct: 2   GSSSERD-------GHVSEQAQVNPLPYNEGATLSCSSEIFGIEGFNSFNFNGREIPITT 61

Query: 79  ENNIGMMLKLLLEESNKRKKVREEVEKKKKEDDKKARKARI 118
           + +I +ML L LEE+ +R+++ EE EK++KEDDKKARK ++
Sbjct: 62  D-DIEVMLGLFLEENQRRERLMEEAEKRQKEDDKKARKEQL 94

[Close]
BLAST of MELO3C019259 vs. TrEMBL
Match: A0A0A0LAT2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G298590 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.1e-13
Identity = 52/116 (44.83%), Postives = 74/116 (63.79%), Query Frame = 1 

Query: 1   MAKNKNVDQSEKKKALSTGNPSERDIEVVCSDNPVSKQAQLSSSLHNEALPSSSEVFGTE 60
           MA  K V++SEK            ++EVV SD  +S+QAQ S     + LPSSS++FG E
Sbjct: 1   MAGEKAVEKSEKS-----------ELEVVRSDGRMSEQAQPSFV---QTLPSSSDIFGAE 60

Query: 61  GWNPFNFKGKEISMTDENNIGMMLKLLLEESNKRKKVREEVEKKKKEDDKKARKAR 117
           G+NPFNF+G+EISMT E N+ +ML L LEE+ +R+K+RE    +K+    + RK +
Sbjct: 61  GFNPFNFQGREISMTAE-NLEIMLGLFLEENKRREKLRETYGGEKESRGGRKRKKK 101

[Close]
BLAST of MELO3C019259 vs. NCBI nr
Match: gi|700194441|gb|KGN49618.1| (hypothetical protein Csa_5G026440 [Cucumis sativus])

HSP 1 Score: 91.3 bits (225), Expect = 1.2e-15
Identity = 52/107 (48.60%), Postives = 70/107 (65.42%), Query Frame = 1 

Query: 1   MAKNKNVDQSEKKKALSTGNPSERDIEVVCSDNPVSKQAQLSSSLHNEALPSSSEVFGTE 60
           MAKN   +  EKKK         ++ +VVC D PVS+QAQ  S+   E + +SSEV  TE
Sbjct: 1   MAKNNESEHFEKKKV-------RKNTKVVCFDGPVSEQAQHDSTPQTETMRNSSEVLETE 60

Query: 61  GWNPFNFKGKEISMTDENNIGMMLKLLLEESNKRKKVREEVEKKKKE 108
           GWNPF F+  EIS+TDE NIG   K+LL++ N+R + +E VE+K+KE
Sbjct: 61  GWNPFKFQWMEISITDE-NIG---KMLLDKRNRRGRAKEGVEEKQKE 96

[Close]
BLAST of MELO3C019259 vs. NCBI nr
Match: gi|700202874|gb|KGN58007.1| (hypothetical protein Csa_3G427420 [Cucumis sativus])

HSP 1 Score: 85.9 bits (211), Expect = 5.2e-14
Identity = 49/101 (48.51%), Postives = 70/101 (69.31%), Query Frame = 1 

Query: 19  GNPSERDIEVVCSDNPVSKQAQLSSSLHNEA--LPSSSEVFGTEGWNPFNFKGKEISMTD 78
           G+ SERD         VS+QAQ++   +NE   L  SSE+FG EG+N FNF G+EI +T 
Sbjct: 2   GSSSERD-------GHVSEQAQVNPLPYNEGATLSCSSEIFGIEGFNSFNFNGREIPITT 61

Query: 79  ENNIGMMLKLLLEESNKRKKVREEVEKKKKEDDKKARKARI 118
           + +I +ML L LEE+ +R+++ EE EK++KEDDKKARK ++
Sbjct: 62  D-DIEVMLGLFLEENQRRERLMEEAEKRQKEDDKKARKEQL 94

[Close]
BLAST of MELO3C019259 vs. NCBI nr
Match: gi|700202649|gb|KGN57782.1| (hypothetical protein Csa_3G298590 [Cucumis sativus])

HSP 1 Score: 84.3 bits (207), Expect = 1.5e-13
Identity = 52/116 (44.83%), Postives = 74/116 (63.79%), Query Frame = 1 

Query: 1   MAKNKNVDQSEKKKALSTGNPSERDIEVVCSDNPVSKQAQLSSSLHNEALPSSSEVFGTE 60
           MA  K V++SEK            ++EVV SD  +S+QAQ S     + LPSSS++FG E
Sbjct: 1   MAGEKAVEKSEKS-----------ELEVVRSDGRMSEQAQPSFV---QTLPSSSDIFGAE 60

Query: 61  GWNPFNFKGKEISMTDENNIGMMLKLLLEESNKRKKVREEVEKKKKEDDKKARKAR 117
           G+NPFNF+G+EISMT E N+ +ML L LEE+ +R+K+RE    +K+    + RK +
Sbjct: 61  GFNPFNFQGREISMTAE-NLEIMLGLFLEENKRREKLRETYGGEKESRGGRKRKKK 101

The following BLAST results are available for this feature:
BLAST of MELO3C019259 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KJ97_CUCSA8.6e-1648.60Uncharacterized protein OS=Cucumis sativus GN=Csa_5G026440 PE=4 SV=1[more]
A0A0A0LBL2_CUCSA3.6e-1448.51Uncharacterized protein OS=Cucumis sativus GN=Csa_3G427420 PE=4 SV=1[more]
A0A0A0LAT2_CUCSA1.1e-1344.83Uncharacterized protein OS=Cucumis sativus GN=Csa_3G298590 PE=4 SV=1[more]
BLAST of MELO3C019259 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700194441|gb|KGN49618.1|1.2e-1548.60hypothetical protein Csa_5G026440 [Cucumis sativus][more]
gi|700202874|gb|KGN58007.1|5.2e-1448.51hypothetical protein Csa_3G427420 [Cucumis sativus][more]
gi|700202649|gb|KGN57782.1|1.5e-1344.83hypothetical protein Csa_3G298590 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C019259T1MELO3C019259T1mRNA


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 87..107
scor

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C019259Silver-seed gourdcarmeB0030
MELO3C019259Silver-seed gourdcarmeB0341
MELO3C019259Silver-seed gourdcarmeB0863
MELO3C019259Cucumber (Chinese Long) v3cucmeB103
MELO3C019259Cucumber (Chinese Long) v3cucmeB457
MELO3C019259Cucumber (Chinese Long) v3cucmeB532
MELO3C019259Watermelon (97103) v2mewmbB083
MELO3C019259Watermelon (97103) v2mewmbB092
MELO3C019259Watermelon (97103) v2mewmbB106
MELO3C019259Wax gourdmewgoB107
MELO3C019259Wax gourdmewgoB126
MELO3C019259Wax gourdmewgoB140
MELO3C019259Melon (DHL92) v3.5.1memeB039
MELO3C019259Melon (DHL92) v3.5.1memeB057
MELO3C019259Cucumber (Gy14) v1cgymeB014
MELO3C019259Cucumber (Gy14) v1cgymeB072
MELO3C019259Cucumber (Gy14) v1cgymeB246
MELO3C019259Cucurbita maxima (Rimu)cmameB087
MELO3C019259Cucurbita maxima (Rimu)cmameB451
MELO3C019259Cucurbita maxima (Rimu)cmameB502
MELO3C019259Cucurbita maxima (Rimu)cmameB533
MELO3C019259Cucurbita moschata (Rifu)cmomeB080
MELO3C019259Cucurbita moschata (Rifu)cmomeB443
MELO3C019259Cucurbita moschata (Rifu)cmomeB482
MELO3C019259Cucurbita moschata (Rifu)cmomeB523
MELO3C019259Cucurbita moschata (Rifu)cmomeB768
MELO3C019259Wild cucumber (PI 183967)cpimeB096
MELO3C019259Wild cucumber (PI 183967)cpimeB445
MELO3C019259Wild cucumber (PI 183967)cpimeB520
MELO3C019259Cucumber (Chinese Long) v2cumeB097
MELO3C019259Cucumber (Chinese Long) v2cumeB454
MELO3C019259Cucumber (Chinese Long) v2cumeB516
MELO3C019259Watermelon (Charleston Gray)mewcgB086
MELO3C019259Watermelon (Charleston Gray)mewcgB090
MELO3C019259Watermelon (Charleston Gray)mewcgB092
MELO3C019259Watermelon (97103) v1mewmB103
MELO3C019259Watermelon (97103) v1mewmB124
MELO3C019259Watermelon (97103) v1mewmB130
MELO3C019259Cucurbita pepo (Zucchini)cpemeB257
MELO3C019259Cucurbita pepo (Zucchini)cpemeB599
MELO3C019259Cucurbita pepo (Zucchini)cpemeB667
MELO3C019259Bottle gourd (USVL1VR-Ls)lsimeB053
MELO3C019259Bottle gourd (USVL1VR-Ls)lsimeB088
MELO3C019259Cucumber (Gy14) v2cgybmeB083
MELO3C019259Cucumber (Gy14) v2cgybmeB395
MELO3C019259Cucumber (Gy14) v2cgybmeB452