MELO3C019191 (gene) Melon (DHL92) v3.5.1

NameMELO3C019191
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionInterleukin enhancer-binding factor 2
Locationchr8 : 14228271 .. 14228735 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGATGAAAAAACTCATTGATGCCAAGATTAAAGTTAGATATAATTATACTGGCTTTGTTCCAGCTTCTATAGTGATCACTGATGATCAAGGCGATAATTTTATCATCAATACCGTTCCACCACCCGAAGCCAGATGGTTTGTGGAAAGAAGTGTAAGAGTTCATGGTTCTTTCAAATCTAAGACCGCAGACAAATTTGATGAACACAACCCTTTGGCTGAAGTCTACACATACAATGGCTTTCAAGCAGCCCCGCCGGAAACAACAAAGTCACGCGGTGACTACAATTACCTAAACTCTGACAAGCATTCTATCTCAAATCCCACACAAGCCAAGAAAAACAACTCATCAGAATCTGAATATGATCTTTTCGATCAACAACTTAGTGAAAAAAGGAAAGAGAAAGCGAAGGTTATGCTCATCATAAATGATCAAGATCATTGTCATTACTCCAAGAGATAA

mRNA sequence

ATGAAGATGAAAAAACTCATTGATGCCAAGATTAAAGTTAGATATAATTATACTGGCTTTGTTCCAGCTTCTATAGTGATCACTGATGATCAAGGCGATAATTTTATCATCAATACCGTTCCACCACCCGAAGCCAGATGGTTTGTGGAAAGAAGTGTAAGAGTTCATGGTTCTTTCAAATCTAAGACCGCAGACAAATTTGATGAACACAACCCTTTGGCTGAAGTCTACACATACAATGGCTTTCAAGCAGCCCCGCCGGAAACAACAAAGTCACGCGGTGACTACAATTACCTAAACTCTGACAAGCATTCTATCTCAAATCCCACACAAGCCAAGAAAAACAACTCATCAGAATCTGAATATGATCTTTTCGATCAACAACTTAGTGAAAAAAGGAAAGAGAAAGCGAAGGTTATGCTCATCATAAATGATCAAGATCATTGTCATTACTCCAAGAGATAA

Coding sequence (CDS)

ATGAAGATGAAAAAACTCATTGATGCCAAGATTAAAGTTAGATATAATTATACTGGCTTTGTTCCAGCTTCTATAGTGATCACTGATGATCAAGGCGATAATTTTATCATCAATACCGTTCCACCACCCGAAGCCAGATGGTTTGTGGAAAGAAGTGTAAGAGTTCATGGTTCTTTCAAATCTAAGACCGCAGACAAATTTGATGAACACAACCCTTTGGCTGAAGTCTACACATACAATGGCTTTCAAGCAGCCCCGCCGGAAACAACAAAGTCACGCGGTGACTACAATTACCTAAACTCTGACAAGCATTCTATCTCAAATCCCACACAAGCCAAGAAAAACAACTCATCAGAATCTGAATATGATCTTTTCGATCAACAACTTAGTGAAAAAAGGAAAGAGAAAGCGAAGGTTATGCTCATCATAAATGATCAAGATCATTGTCATTACTCCAAGAGATAA

Protein sequence

MKMKKLIDAKIKVRYNYTGFVPASIVITDDQGDNFIINTVPPPEARWFVERSVRVHGSFKSKTADKFDEHNPLAEVYTYNGFQAAPPETTKSRGDYNYLNSDKHSISNPTQAKKNNSSESEYDLFDQQLSEKRKEKAKVMLIINDQDHCHYSKR*
BLAST of MELO3C019191 vs. TrEMBL
Match: E5GB30_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 3.5e-09
Identity = 33/91 (36.26%), Postives = 54/91 (59.34%), Query Frame = 1

Query: 2   KMKKLIDAKIKVRYNYTGFVPASIVITDDQGDNFIINTVPPPEARWFVERSVRVHGSFKS 61
           ++  LI+A I+V+ NY+GF+PA I + D +  ++II  +   E +W + R+  +HG+F  
Sbjct: 252 ELTDLIEASIRVKDNYSGFIPAFIKLIDKEERSYIIQVIVKTEGKWHLGRNPSIHGTFTR 311

Query: 62  KTADKFDEHNPLAEVYTYNGFQAAPPETTKS 93
           + A +FDE N  +E Y + G  A  PE   S
Sbjct: 312 EAARRFDEFNLNSEQYFFEGNLAISPEKAVS 342

BLAST of MELO3C019191 vs. TrEMBL
Match: A0A0A0LH82_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G055060 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 6.0e-09
Identity = 33/69 (47.83%), Postives = 44/69 (63.77%), Query Frame = 1

Query: 20 FVPASIVITDDQGDNFIINTVPPPEARWFVERSVRVHGSFKSKTADKFDEHNPLAEVYTY 79
          FVPA I ITDD G++F I  V   + +W VER+VR HG FKS+    F E NP A+ +T+
Sbjct: 8  FVPAYIRITDDLGNSFPIQIVSHTQGKWLVERNVRKHGIFKSQATTSFGEFNPNAKQFTF 67

Query: 80 NGFQAAPPE 89
           G +  PP+
Sbjct: 68 IGSEGLPPK 76

BLAST of MELO3C019191 vs. NCBI nr
Match: gi|659071590|ref|XP_008460776.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103499536 [Cucumis melo])

HSP 1 Score: 100.1 bits (248), Expect = 3.5e-18
Identity = 48/108 (44.44%), Postives = 69/108 (63.89%), Query Frame = 1

Query: 4   KKLIDAKIKVRYNYTGFVPASIVITDDQGDNFIINTVPPPEARWFVERSVRVHGSFKSKT 63
           K LI+AKIK+RYNY+GF+PA++ I D++G+ F I  V  PE +W +ER+VR+HG+FK + 
Sbjct: 327 KNLIEAKIKIRYNYSGFLPANVRIFDNEGNKFSIQVVTHPEGKWLIERNVRLHGTFKRQA 386

Query: 64  ADKFDEHNPLAEVYTYNGFQAAPPETTKSRGDYNYLNSDKHSISNPTQ 112
           A  FDE NP +E + + G +A  P       D+   +SD    S P Q
Sbjct: 387 AAAFDEFNPESEQFFFEGMEAISP-------DFLATSSDGRKSSTPDQ 427

BLAST of MELO3C019191 vs. NCBI nr
Match: gi|307135793|gb|ADN33672.1| (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 69.7 bits (169), Expect = 5.1e-09
Identity = 33/91 (36.26%), Postives = 54/91 (59.34%), Query Frame = 1

Query: 2   KMKKLIDAKIKVRYNYTGFVPASIVITDDQGDNFIINTVPPPEARWFVERSVRVHGSFKS 61
           ++  LI+A I+V+ NY+GF+PA I + D +  ++II  +   E +W + R+  +HG+F  
Sbjct: 252 ELTDLIEASIRVKDNYSGFIPAFIKLIDKEERSYIIQVIVKTEGKWHLGRNPSIHGTFTR 311

Query: 62  KTADKFDEHNPLAEVYTYNGFQAAPPETTKS 93
           + A +FDE N  +E Y + G  A  PE   S
Sbjct: 312 EAARRFDEFNLNSEQYFFEGNLAISPEKAVS 342

BLAST of MELO3C019191 vs. NCBI nr
Match: gi|700205999|gb|KGN61118.1| (hypothetical protein Csa_2G055060 [Cucumis sativus])

HSP 1 Score: 68.9 bits (167), Expect = 8.6e-09
Identity = 33/69 (47.83%), Postives = 44/69 (63.77%), Query Frame = 1

Query: 20 FVPASIVITDDQGDNFIINTVPPPEARWFVERSVRVHGSFKSKTADKFDEHNPLAEVYTY 79
          FVPA I ITDD G++F I  V   + +W VER+VR HG FKS+    F E NP A+ +T+
Sbjct: 8  FVPAYIRITDDLGNSFPIQIVSHTQGKWLVERNVRKHGIFKSQATTSFGEFNPNAKQFTF 67

Query: 80 NGFQAAPPE 89
           G +  PP+
Sbjct: 68 IGSEGLPPK 76

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
E5GB30_CUCME3.5e-0936.26Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A0A0A0LH82_CUCSA6.0e-0947.83Uncharacterized protein OS=Cucumis sativus GN=Csa_2G055060 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|659071590|ref|XP_008460776.1|3.5e-1844.44PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103499536 [Cucumis me... [more]
gi|307135793|gb|ADN33672.1|5.1e-0936.26hypothetical protein [Cucumis melo subsp. melo][more]
gi|700205999|gb|KGN61118.1|8.6e-0947.83hypothetical protein Csa_2G055060 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C019191T1MELO3C019191T1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None