MELO3C019090 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C019090
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	DNA gyrase subunit B
Location	chr8 : 11691419 .. 11697248 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGAAATTTTCATTGTTGAAGGAGACTCTGCCGGTGGAAGTGCGAAACAGGGTCGTGATAGGCGCTTCCAGGTATTCTCCGATTGTTAATGATTGATTAGTTTTGTAGATTTATTTTTAGCTTATAGCAACAATTGAAGGCTTAAAGCTTGTTAGGACAATAAATTAAGCTATTTATTTTTACAGAAAACGAGAATAAATGAAAATAAAAAGTATATCACATAGACTGTTGAGAAGTCCTCCCAGCAGGAAAGGAAAATAAATTGTGACTAATTGGGTGGGTTGCAAAAAGATCAGGTCCTCTCGACTGAAAGGGAAAACAGGAAAAGAAAGTCAACAGTTAGTAGAAGACAAAAAAATATCTTTTACATGATAGAAACGCAATCCCATATAGATCATAGGATATCTCTAACACTTTCTTCTTGATGTTTACTGACAAAGATCGTGGACAAATCATTCTTGAGGGGTTTAAGACAAGGAGACCCTTAGCTCCCTTTTCTTTGTAATTGTAATTGGTGTCTTGAGCTTTACTAAAGACAAGCTTTTGATAAAAGGTGTGGAAATGGCTTTAGGAATGACATTCATGTGAGTCATTGAATTTGTCGATGACATTTACTATAGTTAAGAGTACAATGCAGAGAAGCTTCACATTAAGAGAATTATCAATATTTTTGAGTTGGTCACTGGACTTAAAATTGATAAACACAAATGACAGCCAATATCTTGTGGATTAAATGTAGAAGAATGTGGAGAAAAATGTGTTTTGTGGGGATATGATGTGGAACCCAAGTCAAATGCACTTCTTTTTTTCAAAAGGAAACATAGTTTTTTTTTTTTGACAAAATGAAACCAACAATTGCAATGCAAAAATAAAGGGAGGCCAAGCCTTCAAGAACATCATGGTACAAGAATTCACGCGGCAAAAGATCCTTCCAACCGAAGAGACTTCTAACAAAGGCAAAACTTGCGACTTGACATCTTGAGAGCTTTGACTGCACCGAGACAAGATCTTCAAATATCAATCTCGAAACATCAAAAGCAGTCAGAAGCCCAGAAAGTCAAACTTACCACTTACCAATCAGATCTCAAGTTAAAATGTAACCACAGTTCCTCATTTGCTAATAACTTTATAGCTCCAATATGAATCCTCCTTGAAGAATTTCAAGTTTCATAACTTTCTTTTTAAACAGAGATAATTTTTCATTGATGTAATGAAAAGAGACTATTGCTCAAGCTACATTAGTAGCAAATAAGAATGAGGAGTCAACAAGTGCATTTGAATATCTAACTAGGTTGATATACCCTTAGCACCCTCATCATATCCCCAAAATAAGTGTTAGTGATATATAATTAAATTGTGATATATAATTAAATTTTCTTTCAACCACGAGCTTAAGCTTTTGGGTGAATTGGTGGTTTAAGATGGTGTCGGAGCAGGTGGTTTAGAAGGTCCTATGTTCAAGTCCATGTTTTGTTGTTTCCTTCCCAGTTAAAATTGATTTTTACTTGTTGGGCCTTTCAAATATTTCAAGCTCACAAGCGAGAAGTGTTGGTGGTATATAATTAAATTTGCCTTCAACCACTAGTTTAAGCTTTTGGGTGAATTGGTGATTTAAGAGATGTGTTACGTGCAAAATCAAGGGTGAAAAGTAGCACCATATTTTCTTTTCTTGTCTATCGTTAAGCCTAATTCGGGAAAAGATCTCGATGTTATTTGACTTGAGTTGGAACTTCCCCAGTAGTGTTGAAGGGACCCTTTTAGGCTTCAACAGACTTTTGGAACTCCAGTCATGATTAAGGCTAGGATCTTGTAGTCCAATACTATTATGATCTCTCTGTGAATGTTATGGAATCAGAGAAATAGGAGGATCTTCAAAGAACGCTACCTCAATGAGTTATGGGAGTCCACTGGGCTCTTTGCCTCCATCTGGTGTTCTCTCTAAATCTTTTTGCAATTATGGTCTTGTTCATATCCATGTGGGAGCCTTTTTTGTAAACCTTTGGCTTTGTGGGGATATCTCATCTCCATTTTTGTTTGATCTTTCCTATTTTTTTCTTTCCTTATCTTAATTTGACATGACAGTGGTTCAGATTTTGATGGTTGTGTGTCTTTTGAAATGTATGCATGTGTGAAATGTGTCTTTTGGAATATGCGTGCGAGCATGCACGTACATAAAAATGAGTACAACCCGTTTGCTCATACTTTTATTTTTCTACCTTATTTTTCACGATATTGGTCAATCAACTACAACTTTAAGGACAAATAGTTTTCAGGGCAATGTATCGTTTATTGGTAGGAAAGTATTAGAGCATACTATACCTTTCTCGGCCTTCTAGCTAAGAGCAAGTGCAAGTATAAGAGCGTACCTGTGGTCAACTGAGGAATTTGTTAAAAATGTAGTTATAAATACAACAGGGTGAAGTGATTTAAGGAAGCCAACTTTTAGTATTAGTTTTGGGATGTGGTGCAGCCCCCTCGATAGTGTATTTTCTCTTTCATATTCCAATACAATCCCAATTTCACTTCTCTACTTTCCATTCACGTGATGGGTTTCTATGGAAGTTTGTTACGTAGGAGGAATAGGCTTTTGCTAGAAGAGGAAAGGAATAGTAAGGAAATGAAGAGTGTATTTTTTGTCGAGCTTGGTTGAGAAGGAGGTCTCCAAGTTCATTGAATTACTTGTGATCCTGTCTGTTTTTTTTTTTCATTTTTACGAATATAAAATTTAGGATTTCTGTACTGTTGCTATCATATATAATGTATTCTGTGAGACCTCCTATTATACATACAGACAGACACAAGGGTAAAAGAGGGATTACACAGGGGACAGCTCATCAGGATATGACTGGAGAGGAGAATAGCGGTTGAGGGTCCCACCTGGGGAGGAGTACTTAAGAATGTGTGTGGATTGCTGAAGTTAGGTTTTATTTTGGGAAAAGCTGCTGAGAGCTTTTAGGAAAGAAGAGCCAGCCTTGTCGAAATTGCTGGAGGGTTACCTTTTATATTTCTATAGTTGCTTGCTTGTTATTTCTTTTTCTTCCTTGTTCGTGAGCTGAACTTTGGGTTAAGAACTTGCTCTGATTTCCTTTAGATAGATCATAACGGAGTACTGTCTCTGTTTCTCTAGTTTGTTGGGTTTTTCCGTGTTCCAGGTGGAGGAGTCCTAACATAATCTTAGACTGATAGAAAGTTCTTTAAATACTTTTACACTGATAGGCATCTACATGTGTCAGACACACATGGCTATGCGTACATGTCCAAGAAACAATACATACTTTGATATCACCGTGATTTTGGAGTGAACCATTAAAGAACCTCTGCATGTTTTATGAGGTTGAAGTCTGCGTGTGTTATAATTGAAACATATGCTTGCTGTATATATTGTCATTTCCTTTCTACTGTTTATAATACTCCAGTCCTTCAGTCACTTAAGTTTTTTCTTTTTTAAATCAGTGAAATAAGGATTGTGATACATTCGTATTCACATGTTTATCATACAGTCTATAGTTAAGTACCTGCATGCATGACAATACAAAAATGAATATGCACATATTATACACCACTGCAAATATCCTAAATGTCCTTAATTTGTTATAAATGCTCAATGCAGGCTATTCTACCTTTGAGAGGCAAAATCTTAAACATTGAGAGGAAAGACGAGGCTGCAATGTACAAAAATGAAGAGATTAATAATTTAATTCGAGCTCTTGGACTTGGATTCAAGGTTTATAATAGTTTTTCCTTTCATTATTTTGAATTATTGCTACTTTTTCTTAGATTTTGCATTTACCATTGATGTCAGGGGGAAGATTTTAAAAAGGAAGCTCTTCGGTATCATAAAATAATTATATTAACTGATGCTGATGTCGATGGTGCTCACATTCGAACTCTGCTCTTAACGTTTTTCTTCCGATATCAGGTACTGTAATTGGCATCATTATCAGGTACTGTTGTTGTCACTATTATTTGTGAGGGAATGAAAACCAATTTGATTTTGGGTCGTGATTACAGAAAGCTTTGTTTGAGGAAGGGTGCATTTATGTTGGAGTTCCACCTCTTTTCAAGGTTTGGTTTCCCACTTGATGGATCAGAGATGCAAAATCATATGCTTAGTTTTATTTCATTCTGTGGCTTTTTTCTTTTGCCTTATTCTTGTTTTTGGAGAATATCAGGTTGAGAGGGGGAAGCAAGTATACTATTGCTATGATGACAAGGAACTAAAGAAGGTTCAAAGTTCCTTCCCATCAAATGCATCATATAATATTCAGAGGTTCAAAGGTATTCATTAATGTTTGTGTTGATTACACCCTCTTGATGTTTTCAATAGAGCCGTTGCCCCTCTACCTGATGTCGTACACACCATTTGGTGGCTTCTTGTATAATCCTTGTTAGTTGAATTATGCTAATGTTTGAGAGTGCTTTAGGCATCACACAAAACCTCCATGGTGGGTGTAAAAAACAAAGATGCTTTTGGTAAAAGTTAAACGCACTAGGGTGCTTTTTAGTCCAAGTGCTTGGTTTGGAAACACTTCAATAGGTACTTGAGAGGGTTTTAGACACCCTTTCTCATTAATATATTGTTTCGTTTTCAAAAAAAGAACAAAGAAAGATTATTTAATAAACAAGCAGGATAGAAGTTTAATCTTGAGAGGTCAGCACATAGTTGAAATCTGAAAATATGACAAATCTGTAAGGCGCTCAAATTTTGAGACCGTGTAAAACTGGTTTGGCTGCTTTTCTTCAGATTCTGTGATGGAAGTTCTATTTTTCTACAAGACAATAATGATGTTAATGAATAAAGAATTGTTATATTGTATTTTTAAAAATATGCTAAATATTTTTTTATTTCAGGTTTGGGTGAGATGATGCCTGCACAACTATGGGAAACGACAATGGACCCAGAACGAAGGATGCTGAAGCAGTTGGCAGTTGAGGATGCAGCAGAAGCAAATGTCGTATTTTCATCTCTTATGGGTGCCCGAGTAAGTGGTTCTGCAGTTTCTACCATTTGGTGATATTTGGTATTTTCATGCATGTTAAAAGTTGCTCAATCGGAAAATAAGGAACCATTCCTACAGAAGTTTTTTAGACACCAACCAATTCATTTAAGCTAGAGAAGATTAGCATCAATGGCTTTTGCTTTAACAAAGCCTTCATAGTTTTGTGTTCAACTATTGTGCTTGTGTGCGTCCATGCCAATGTAACGTGCTAGCTTTTCTTTTTTGCATAAAATTCATCTGGCATACTTATATCTATTGCTCGAATTTTTCTTTTTTTTTTGTTCAATCACTGGATTAATATGGGTTCTTTCCTTTTCCCAGGTGGATTTTCGAAAGGAACTTATCCAGAAATCAGCAAGTACGATGAATCTCGAGCATCTAGATATTTAACTGTAGGATATTAGCTTCTAATCCAATCGGGGTAGTAACAGGATGGTCAGCTTTTGAACTTTTGGAAAAGTTAGAAAGAAATGTATGATTAAACAGATTGAATTGGTTGATGTATTATCTCCATTGGCTGTCATCATGATTTATATTGTTGTCCACAGCGGTCGAGAAAGACGAACATAGCCTTCACTTTAGGCCCATGCCAAGGGAGTGCTGTGCACATTGGCTTGTATAGGTGAGAAATTTAGGAGACTCAGGTGGGTGGTATGGTTAGGATGTCATTTTGATATATGAAATTCTTTAGCAAGTTTTGTATGTTTCTCACTTAGCTCCATTTTCTTTGTCCACCCTGTTGTATAATTTTAGGTTGAGTTGGGTTGTAAAGTTATTTGTTTTAATTGATTTAAAATACTTAAATTTCTTGGTTGTATAAATGTCAAATT

mRNA sequence

CAGAAATTTTCATTGTTGAAGGAGACTCTGCCGGTGGAAGTGCGAAACAGGGTCGTGATAGGCGCTTCCAGGCTATTCTACCTTTGAGAGGCAAAATCTTAAACATTGAGAGGAAAGACGAGGCTGCAATGTACAAAAATGAAGAGATTAATAATTTAATTCGAGCTCTTGGACTTGGATTCAAGGGGGAAGATTTTAAAAAGGAAGCTCTTCGGTATCATAAAATAATTATATTAACTGATGCTGATGTCGATGGTGCTCACATTCGAACTCTGCTCTTAACGTTTTTCTTCCGATATCAGAAAGCTTTGTTTGAGGAAGGGTGCATTTATGTTGGAGTTCCACCTCTTTTCAAGGTTGAGAGGGGGAAGCAAGTATACTATTGCTATGATGACAAGGAACTAAAGAAGGTTCAAAGTTCCTTCCCATCAAATGCATCATATAATATTCAGAGGTTCAAAGGTTTGGGTGAGATGATGCCTGCACAACTATGGGAAACGACAATGGACCCAGAACGAAGGATGCTGAAGCAGTTGGCAGTTGAGGATGCAGCAGAAGCAAATGTCGTATTTTCATCTCTTATGGGTGCCCGAGTGGATTTTCGAAAGGAACTTATCCAGAAATCAGCAAGTACGATGAATCTCGAGCATCTAGATATTTAACTGTAGGATATTAGCTTCTAATCCAATCGGGGTAGTAACAGGATGGTCAGCTTTTGAACTTTTGGAAAAGTTAGAAAGAAATGTATGATTAAACAGATTGAATTGGTTGATGTATTATCTCCATTGGCTGTCATCATGATTTATATTGTTGTCCACAGCGGTCGAGAAAGACGAACATAGCCTTCACTTTAGGCCCATGCCAAGGGAGTGCTGTGCACATTGGCTTGTATAGGTGAGAAATTTAGGAGACTCAGGTGGGTGGTATGGTTAGGATGTCATTTTGATATATGAAATTCTTTAGCAAGTTTTGTATGTTTCTCACTTAGCTCCATTTTCTTTGTCCACCCTGTTGTATAATTTTAGGTTGAGTTGGGTTGTAAAGTTATTTGTTTTAATTGATTTAAAATACTTAAATTTCTTGGTTGTATAAATGTCAAATT

Coding sequence (CDS)

ATGTACAAAAATGAAGAGATTAATAATTTAATTCGAGCTCTTGGACTTGGATTCAAGGGGGAAGATTTTAAAAAGGAAGCTCTTCGGTATCATAAAATAATTATATTAACTGATGCTGATGTCGATGGTGCTCACATTCGAACTCTGCTCTTAACGTTTTTCTTCCGATATCAGAAAGCTTTGTTTGAGGAAGGGTGCATTTATGTTGGAGTTCCACCTCTTTTCAAGGTTGAGAGGGGGAAGCAAGTATACTATTGCTATGATGACAAGGAACTAAAGAAGGTTCAAAGTTCCTTCCCATCAAATGCATCATATAATATTCAGAGGTTCAAAGGTTTGGGTGAGATGATGCCTGCACAACTATGGGAAACGACAATGGACCCAGAACGAAGGATGCTGAAGCAGTTGGCAGTTGAGGATGCAGCAGAAGCAAATGTCGTATTTTCATCTCTTATGGGTGCCCGAGTGGATTTTCGAAAGGAACTTATCCAGAAATCAGCAAGTACGATGAATCTCGAGCATCTAGATATTTAA

Protein sequence

MYKNEEINNLIRALGLGFKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFFRYQKALFEEGCIYVGVPPLFKVERGKQVYYCYDDKELKKVQSSFPSNASYNIQRFKGLGEMMPAQLWETTMDPERRMLKQLAVEDAAEANVVFSSLMGARVDFRKELIQKSASTMNLEHLDI*

Homology

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BLAST of MELO3C019090 vs. Swiss-Prot
Match: GYRB_NICBE (DNA gyrase subunit B, chloroplastic/mitochondrial OS=Nicotiana benthamiana GN=GYRB PE=2 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 6.9e-87
Identity = 159/177 (89.83%), Postives = 163/177 (92.09%), Query Frame = 1


Query: 1   MYKNEEINNLIRALGLGFKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFFRYQKA 60
           MYKNEEI NLI  LGLG KGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFFRYQ+A
Sbjct: 555 MYKNEEIQNLILGLGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFFRYQRA 614

Query: 61  LFEEGCIYVGVPPLFKVERGKQVYYCYDDKELKKVQSSFPSNASYNIQRFKGLGEMMPAQ 120
           LFEEGCIYVGVPPL+KVERGKQVYYCYDD ELKKVQ SFPSNASYNIQRFKGLGEMMPAQ
Sbjct: 615 LFEEGCIYVGVPPLYKVERGKQVYYCYDDAELKKVQRSFPSNASYNIQRFKGLGEMMPAQ 674

Query: 121 LWETTMDPERRMLKQLAVEDAAEANVVFSSLMGARVDFRKELIQKSASTMNLEHLDI 178
           LWETTM+PE R+LKQL VEDAAEANVVFSSLMG+RVD RK+LIQ SAS MNLE LDI
Sbjct: 675 LWETTMNPETRLLKQLVVEDAAEANVVFSSLMGSRVDIRKQLIQNSASMMNLEQLDI 731

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BLAST of MELO3C019090 vs. Swiss-Prot
Match: GYRB_ORYSJ (DNA gyrase subunit B, chloroplastic/mitochondrial OS=Oryza sativa subsp. japonica GN=GYRB PE=2 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 1.6e-83
Identity = 150/177 (84.75%), Postives = 163/177 (92.09%), Query Frame = 1


Query: 1   MYKNEEINNLIRALGLGFKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFFRYQKA 60
           +YKNEEI NLI ALGLG KGEDF KEALRYHKI+ILTDADVDGAHIRTLLLTFFFRYQKA
Sbjct: 553 LYKNEEIQNLIVALGLGVKGEDFNKEALRYHKIVILTDADVDGAHIRTLLLTFFFRYQKA 612

Query: 61  LFEEGCIYVGVPPLFKVERGKQVYYCYDDKELKKVQSSFPSNASYNIQRFKGLGEMMPAQ 120
           LF+EGCIYVGVPPL+KVERGKQ +YCYDD +LK++ ++FP+NASY+IQRFKGLGEMMPAQ
Sbjct: 613 LFDEGCIYVGVPPLYKVERGKQAHYCYDDADLKELVNTFPTNASYHIQRFKGLGEMMPAQ 672

Query: 121 LWETTMDPERRMLKQLAVEDAAEANVVFSSLMGARVDFRKELIQKSASTMNLEHLDI 178
           LWETTMDPERRMLKQL VEDAAEANVVFSSLMG RVD RK+LIQ +AS +NLEHLDI
Sbjct: 673 LWETTMDPERRMLKQLKVEDAAEANVVFSSLMGTRVDVRKQLIQNAASMVNLEHLDI 729

[Close]

BLAST of MELO3C019090 vs. Swiss-Prot
Match: GYRBP_ARATH (DNA gyrase subunit B, chloroplastic OS=Arabidopsis thaliana GN=GYRBC PE=2 SV=3)

HSP 1 Score: 298.5 bits (763), Expect = 4.8e-80
Identity = 145/177 (81.92%), Postives = 157/177 (88.70%), Query Frame = 1


Query: 1   MYKNEEINNLIRALGLGFKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFFRYQKA 60
           MYKNEEI NLI  LGLG KGEDF KE LRYHKIIILTDADVDGAHIRTLLLTFFFRYQ+A
Sbjct: 554 MYKNEEIQNLILGLGLGVKGEDFNKENLRYHKIIILTDADVDGAHIRTLLLTFFFRYQRA 613

Query: 61  LFEEGCIYVGVPPLFKVERGKQVYYCYDDKELKKVQSSFPSNASYNIQRFKGLGEMMPAQ 120
           LF+ GCIYVGVPPLFKVERGKQ +YCYDD  LKK+ +SFP NASYNIQRFKGLGEMMPAQ
Sbjct: 614 LFDAGCIYVGVPPLFKVERGKQAHYCYDDAALKKITASFPGNASYNIQRFKGLGEMMPAQ 673

Query: 121 LWETTMDPERRMLKQLAVEDAAEANVVFSSLMGARVDFRKELIQKSASTMNLEHLDI 178
           LWETTM+P+ R+LKQL V+DAAE N+VFSSLMGARVD RKELI+ +A+ MNLE+LDI
Sbjct: 674 LWETTMNPDTRILKQLVVDDAAETNMVFSSLMGARVDVRKELIKSAATRMNLENLDI 730

[Close]

BLAST of MELO3C019090 vs. Swiss-Prot
Match: GYRBM_ARATH (DNA gyrase subunit B, mitochondrial OS=Arabidopsis thaliana GN=GYRBM PE=2 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 2.0e-78
Identity = 142/177 (80.23%), Postives = 155/177 (87.57%), Query Frame = 1


Query: 1   MYKNEEINNLIRALGLGFKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFFRYQKA 60
           MYKNEEI NLI  LGLG KGEDFKKE LRYHKIIILTDADVDGAHIRTLLLTFFFRYQ+A
Sbjct: 556 MYKNEEIQNLILGLGLGVKGEDFKKENLRYHKIIILTDADVDGAHIRTLLLTFFFRYQRA 615

Query: 61  LFEEGCIYVGVPPLFKVERGKQVYYCYDDKELKKVQSSFPSNASYNIQRFKGLGEMMPAQ 120
           LF+ GCIYVGVPPLFKVERGK   YCYDD +LKK+ S+FP+NASYNIQRFKGLGEMMP Q
Sbjct: 616 LFDAGCIYVGVPPLFKVERGKNAQYCYDDADLKKITSNFPANASYNIQRFKGLGEMMPEQ 675

Query: 121 LWETTMDPERRMLKQLAVEDAAEANVVFSSLMGARVDFRKELIQKSASTMNLEHLDI 178
           LWETTM+PE R+LKQL V+D AEAN+ FSSLMGARVD RKELI+ +A+ +NL+ LDI
Sbjct: 676 LWETTMNPETRILKQLVVDDIAEANMTFSSLMGARVDVRKELIKNAATRINLQRLDI 732

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BLAST of MELO3C019090 vs. Swiss-Prot
Match: GYRB_SYNY3 (DNA gyrase subunit B OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=gyrB PE=3 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 8.0e-59
Identity = 107/177 (60.45%), Postives = 138/177 (77.97%), Query Frame = 1


Query: 1    MYKNEEINNLIRALGLGFKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFFRYQKA 60
            +YKN EI  LI ALGLG KG+DF   +LRYH+++I+TDADVDGAHIRTLLLTFF+RYQ+ 
Sbjct: 902  IYKNTEIQALITALGLGIKGDDFDISSLRYHRVVIMTDADVDGAHIRTLLLTFFYRYQRD 961

Query: 61   LFEEGCIYVGVPPLFKVERGKQVYYCYDDKELKKVQSSFPSNASYNIQRFKGLGEMMPAQ 120
            L ++G IY+  PPL+K+ERGK  +YCY D+EL++  S FP NA+Y IQRFKGLGEMMP Q
Sbjct: 962  LVDQGYIYIACPPLYKLERGKNHFYCYSDRELQEQISQFPPNANYTIQRFKGLGEMMPQQ 1021

Query: 121  LWETTMDPERRMLKQLAVEDAAEANVVFSSLMGARVDFRKELIQKSASTMNLEHLDI 178
            LW+TTM+PE R +K++ +EDAAEA+ +F+ LMG RV  R+E I+   + ++L  LDI
Sbjct: 1022 LWDTTMNPESRTMKRVHIEDAAEADRIFTVLMGDRVAPRREFIETYGTKLDLTDLDI 1078

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BLAST of MELO3C019090 vs. TrEMBL
Match: A0A0A0L272_CUCSA (DNA gyrase subunit B OS=Cucumis sativus GN=Csa_4G430890 PE=3 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 9.1e-94
Identity = 173/177 (97.74%), Postives = 176/177 (99.44%), Query Frame = 1


Query: 1   MYKNEEINNLIRALGLGFKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFFRYQKA 60
           MYKNEEINNLIRALGLGFKGEDFKK+ALRYHKIIILTDADVDGAHIRTLLLTFFFRYQKA
Sbjct: 561 MYKNEEINNLIRALGLGFKGEDFKKDALRYHKIIILTDADVDGAHIRTLLLTFFFRYQKA 620

Query: 61  LFEEGCIYVGVPPLFKVERGKQVYYCYDDKELKKVQSSFPSNASYNIQRFKGLGEMMPAQ 120
           LF+EGCIYVGVPPL+KVERGKQVYYCYDDKELKKVQSSFPSNASYNIQRFKGLGEMMPAQ
Sbjct: 621 LFDEGCIYVGVPPLYKVERGKQVYYCYDDKELKKVQSSFPSNASYNIQRFKGLGEMMPAQ 680

Query: 121 LWETTMDPERRMLKQLAVEDAAEANVVFSSLMGARVDFRKELIQKSASTMNLEHLDI 178
           LWETTMDPERRMLKQLAVEDAAEANVVFSSLMG RVDFRKELIQKSASTMNLEHLDI
Sbjct: 681 LWETTMDPERRMLKQLAVEDAAEANVVFSSLMGVRVDFRKELIQKSASTMNLEHLDI 737

[Close]

BLAST of MELO3C019090 vs. TrEMBL
Match: B9IHQ8_POPTR (DNA gyrase subunit B OS=Populus trichocarpa GN=POPTR_0016s03560g PE=3 SV=2)

HSP 1 Score: 318.5 bits (815), Expect = 5.0e-84
Identity = 153/177 (86.44%), Postives = 165/177 (93.22%), Query Frame = 1


Query: 1   MYKNEEINNLIRALGLGFKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFFRYQKA 60
           MYKNEEI NLI  LGLG KGEDFKK+ALRYHKIIILTDADVDGAHIRTLLLTFFFRYQ+A
Sbjct: 546 MYKNEEIQNLILGLGLGVKGEDFKKDALRYHKIIILTDADVDGAHIRTLLLTFFFRYQRA 605

Query: 61  LFEEGCIYVGVPPLFKVERGKQVYYCYDDKELKKVQSSFPSNASYNIQRFKGLGEMMPAQ 120
           LF+EGCIYVGVPPL+KVERGKQ YYC+DD ELKK+Q SFP NASYNIQRFKGLGEMMPAQ
Sbjct: 606 LFDEGCIYVGVPPLYKVERGKQAYYCFDDAELKKIQRSFPQNASYNIQRFKGLGEMMPAQ 665

Query: 121 LWETTMDPERRMLKQLAVEDAAEANVVFSSLMGARVDFRKELIQKSASTMNLEHLDI 178
           LWETTMDPERR+LKQL VEDAAEAN+VFSSLMG RVDFRKELIQ +AS +N++HLDI
Sbjct: 666 LWETTMDPERRVLKQLVVEDAAEANIVFSSLMGTRVDFRKELIQNAASMINVDHLDI 722

[Close]

BLAST of MELO3C019090 vs. TrEMBL
Match: W9QCV3_9ROSA (DNA gyrase subunit B OS=Morus notabilis GN=L484_003160 PE=3 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 1.9e-83
Identity = 154/177 (87.01%), Postives = 167/177 (94.35%), Query Frame = 1


Query: 1   MYKNEEINNLIRALGLGFKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFFRYQKA 60
           MYKNEEI NLI  LGLG KGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFFRYQKA
Sbjct: 573 MYKNEEIQNLILGLGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFFRYQKA 632

Query: 61  LFEEGCIYVGVPPLFKVERGKQVYYCYDDKELKKVQSSFPSNASYNIQRFKGLGEMMPAQ 120
           LF+ GCIYVGVPPL+KVERGKQVYYC+DD ELKK+QSSFPSNASYNIQRFKGLGEMMPAQ
Sbjct: 633 LFDAGCIYVGVPPLYKVERGKQVYYCFDDVELKKLQSSFPSNASYNIQRFKGLGEMMPAQ 692

Query: 121 LWETTMDPERRMLKQLAVEDAAEANVVFSSLMGARVDFRKELIQKSASTMNLEHLDI 178
           LWETT+DPE+R+LKQL VEDAAEAN+VFSSLMGARVD+RKELIQ SA+ ++L+ LDI
Sbjct: 693 LWETTLDPEQRLLKQLVVEDAAEANIVFSSLMGARVDYRKELIQNSANMIDLDQLDI 749

[Close]

BLAST of MELO3C019090 vs. TrEMBL
Match: D7TIQ6_VITVI (DNA gyrase subunit B OS=Vitis vinifera GN=VIT_08s0007g05120 PE=3 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 1.9e-83
Identity = 156/177 (88.14%), Postives = 165/177 (93.22%), Query Frame = 1


Query: 1   MYKNEEINNLIRALGLGFKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFFRYQKA 60
           MYK+EEI NLI  LGLG KGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFFRYQ+A
Sbjct: 531 MYKSEEIQNLILGLGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFFRYQRA 590

Query: 61  LFEEGCIYVGVPPLFKVERGKQVYYCYDDKELKKVQSSFPSNASYNIQRFKGLGEMMPAQ 120
           LF+EGCIYVGVPPLFKVERGKQV+YCYDD ELK++Q S P NASY+IQRFKGLGEMMP Q
Sbjct: 591 LFDEGCIYVGVPPLFKVERGKQVHYCYDDAELKQLQHSLPPNASYSIQRFKGLGEMMPVQ 650

Query: 121 LWETTMDPERRMLKQLAVEDAAEANVVFSSLMGARVDFRKELIQKSASTMNLEHLDI 178
           LWETTMDPERR+LKQL VEDAAEANVVFSSLMGARVDFRKELIQKSASTM L+ LDI
Sbjct: 651 LWETTMDPERRLLKQLVVEDAAEANVVFSSLMGARVDFRKELIQKSASTMKLDQLDI 707

[Close]

BLAST of MELO3C019090 vs. TrEMBL
Match: K4DDP2_SOLLC (DNA gyrase subunit B OS=Solanum lycopersicum PE=3 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 3.2e-83
Identity = 156/177 (88.14%), Postives = 164/177 (92.66%), Query Frame = 1


Query: 1   MYKNEEINNLIRALGLGFKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFFRYQKA 60
           MYKNEEI NLI  LGLG KGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFFRYQ+A
Sbjct: 553 MYKNEEIQNLILGLGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFFRYQRA 612

Query: 61  LFEEGCIYVGVPPLFKVERGKQVYYCYDDKELKKVQSSFPSNASYNIQRFKGLGEMMPAQ 120
           LFEEGCIYVGVPPL+KVERGKQ YYCYDD ELKKVQ SFPSNASYNIQRFKGLGEMMPAQ
Sbjct: 613 LFEEGCIYVGVPPLYKVERGKQAYYCYDDVELKKVQRSFPSNASYNIQRFKGLGEMMPAQ 672

Query: 121 LWETTMDPERRMLKQLAVEDAAEANVVFSSLMGARVDFRKELIQKSASTMNLEHLDI 178
           LWETTM+PE R+LKQL VEDAAEANVVFSSLMG++VD RK+LIQ SAS +NLE LDI
Sbjct: 673 LWETTMNPETRLLKQLVVEDAAEANVVFSSLMGSKVDVRKQLIQHSASMINLEQLDI 729

[Close]

BLAST of MELO3C019090 vs. TAIR10
Match: AT3G10270.1 (AT3G10270.1 DNA GYRASE B1)

HSP 1 Score: 298.5 bits (763), Expect = 2.7e-81
Identity = 145/177 (81.92%), Postives = 157/177 (88.70%), Query Frame = 1


Query: 1   MYKNEEINNLIRALGLGFKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFFRYQKA 60
           MYKNEEI NLI  LGLG KGEDF KE LRYHKIIILTDADVDGAHIRTLLLTFFFRYQ+A
Sbjct: 596 MYKNEEIQNLILGLGLGVKGEDFNKENLRYHKIIILTDADVDGAHIRTLLLTFFFRYQRA 655

Query: 61  LFEEGCIYVGVPPLFKVERGKQVYYCYDDKELKKVQSSFPSNASYNIQRFKGLGEMMPAQ 120
           LF+ GCIYVGVPPLFKVERGKQ +YCYDD  LKK+ +SFP NASYNIQRFKGLGEMMPAQ
Sbjct: 656 LFDAGCIYVGVPPLFKVERGKQAHYCYDDAALKKITASFPGNASYNIQRFKGLGEMMPAQ 715

Query: 121 LWETTMDPERRMLKQLAVEDAAEANVVFSSLMGARVDFRKELIQKSASTMNLEHLDI 178
           LWETTM+P+ R+LKQL V+DAAE N+VFSSLMGARVD RKELI+ +A+ MNLE+LDI
Sbjct: 716 LWETTMNPDTRILKQLVVDDAAETNMVFSSLMGARVDVRKELIKSAATRMNLENLDI 772

[Close]

BLAST of MELO3C019090 vs. TAIR10
Match: AT5G04130.1 (AT5G04130.1 DNA GYRASE B2)

HSP 1 Score: 293.1 bits (749), Expect = 1.1e-79
Identity = 142/177 (80.23%), Postives = 155/177 (87.57%), Query Frame = 1


Query: 1   MYKNEEINNLIRALGLGFKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFFRYQKA 60
           MYKNEEI NLI  LGLG KGEDFKKE LRYHKIIILTDADVDGAHIRTLLLTFFFRYQ+A
Sbjct: 556 MYKNEEIQNLILGLGLGVKGEDFKKENLRYHKIIILTDADVDGAHIRTLLLTFFFRYQRA 615

Query: 61  LFEEGCIYVGVPPLFKVERGKQVYYCYDDKELKKVQSSFPSNASYNIQRFKGLGEMMPAQ 120
           LF+ GCIYVGVPPLFKVERGK   YCYDD +LKK+ S+FP+NASYNIQRFKGLGEMMP Q
Sbjct: 616 LFDAGCIYVGVPPLFKVERGKNAQYCYDDADLKKITSNFPANASYNIQRFKGLGEMMPEQ 675

Query: 121 LWETTMDPERRMLKQLAVEDAAEANVVFSSLMGARVDFRKELIQKSASTMNLEHLDI 178
           LWETTM+PE R+LKQL V+D AEAN+ FSSLMGARVD RKELI+ +A+ +NL+ LDI
Sbjct: 676 LWETTMNPETRILKQLVVDDIAEANMTFSSLMGARVDVRKELIKNAATRINLQRLDI 732

[Close]

BLAST of MELO3C019090 vs. TAIR10
Match: AT3G23890.1 (AT3G23890.1 topoisomerase II)

HSP 1 Score: 57.8 bits (138), Expect = 8.1e-09
Identity = 39/115 (33.91%), Postives = 62/115 (53.91%), Query Frame = 1


Query: 4   NEEINNLIRALGLGFKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFFRYQKALFE 63
           N+EI NL + LGL    +     +LRY +++I+TD D DG+HI+ LL+ F   +  +L +
Sbjct: 504 NKEIENLKKILGLKQNMKYENVNSLRYGQMMIMTDQDHDGSHIKGLLINFIHSFWPSLLQ 563

Query: 64  EGCIYVG-VPPLFKVER--GKQVYYCYDDKELKKVQSSFPSNAS-YNIQRFKGLG 115
                V  + P+ K  R   K+V   Y   E ++ + S   NA+ ++I+ +KGLG
Sbjct: 564 VPSFLVEFITPIVKATRKGTKKVLSFYSMPEYEEWKESLKGNATGWDIKYYKGLG 618

[Close]

BLAST of MELO3C019090 vs. NCBI nr
Match: gi|659111368|ref|XP_008455715.1| (PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like isoform X1 [Cucumis melo])

HSP 1 Score: 355.9 bits (912), Expect = 4.1e-95
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 1


Query: 1   MYKNEEINNLIRALGLGFKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFFRYQKA 60
           MYKNEEINNLIRALGLGFKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFFRYQKA
Sbjct: 563 MYKNEEINNLIRALGLGFKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFFRYQKA 622

Query: 61  LFEEGCIYVGVPPLFKVERGKQVYYCYDDKELKKVQSSFPSNASYNIQRFKGLGEMMPAQ 120
           LFEEGCIYVGVPPLFKVERGKQVYYCYDDKELKKVQSSFPSNASYNIQRFKGLGEMMPAQ
Sbjct: 623 LFEEGCIYVGVPPLFKVERGKQVYYCYDDKELKKVQSSFPSNASYNIQRFKGLGEMMPAQ 682

Query: 121 LWETTMDPERRMLKQLAVEDAAEANVVFSSLMGARVDFRKELIQKSASTMNLEHLDI 178
           LWETTMDPERRMLKQLAVEDAAEANVVFSSLMGARVDFRKELIQKSASTMNLEHLDI
Sbjct: 683 LWETTMDPERRMLKQLAVEDAAEANVVFSSLMGARVDFRKELIQKSASTMNLEHLDI 739

[Close]

BLAST of MELO3C019090 vs. NCBI nr
Match: gi|659111370|ref|XP_008455716.1| (PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like isoform X2 [Cucumis melo])

HSP 1 Score: 355.9 bits (912), Expect = 4.1e-95
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 1


Query: 1   MYKNEEINNLIRALGLGFKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFFRYQKA 60
           MYKNEEINNLIRALGLGFKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFFRYQKA
Sbjct: 561 MYKNEEINNLIRALGLGFKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFFRYQKA 620

Query: 61  LFEEGCIYVGVPPLFKVERGKQVYYCYDDKELKKVQSSFPSNASYNIQRFKGLGEMMPAQ 120
           LFEEGCIYVGVPPLFKVERGKQVYYCYDDKELKKVQSSFPSNASYNIQRFKGLGEMMPAQ
Sbjct: 621 LFEEGCIYVGVPPLFKVERGKQVYYCYDDKELKKVQSSFPSNASYNIQRFKGLGEMMPAQ 680

Query: 121 LWETTMDPERRMLKQLAVEDAAEANVVFSSLMGARVDFRKELIQKSASTMNLEHLDI 178
           LWETTMDPERRMLKQLAVEDAAEANVVFSSLMGARVDFRKELIQKSASTMNLEHLDI
Sbjct: 681 LWETTMDPERRMLKQLAVEDAAEANVVFSSLMGARVDFRKELIQKSASTMNLEHLDI 737

[Close]

BLAST of MELO3C019090 vs. NCBI nr
Match: gi|778694728|ref|XP_004144333.2| (PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial [Cucumis sativus])

HSP 1 Score: 350.9 bits (899), Expect = 1.3e-93
Identity = 173/177 (97.74%), Postives = 176/177 (99.44%), Query Frame = 1


Query: 1   MYKNEEINNLIRALGLGFKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFFRYQKA 60
           MYKNEEINNLIRALGLGFKGEDFKK+ALRYHKIIILTDADVDGAHIRTLLLTFFFRYQKA
Sbjct: 561 MYKNEEINNLIRALGLGFKGEDFKKDALRYHKIIILTDADVDGAHIRTLLLTFFFRYQKA 620

Query: 61  LFEEGCIYVGVPPLFKVERGKQVYYCYDDKELKKVQSSFPSNASYNIQRFKGLGEMMPAQ 120
           LF+EGCIYVGVPPL+KVERGKQVYYCYDDKELKKVQSSFPSNASYNIQRFKGLGEMMPAQ
Sbjct: 621 LFDEGCIYVGVPPLYKVERGKQVYYCYDDKELKKVQSSFPSNASYNIQRFKGLGEMMPAQ 680

Query: 121 LWETTMDPERRMLKQLAVEDAAEANVVFSSLMGARVDFRKELIQKSASTMNLEHLDI 178
           LWETTMDPERRMLKQLAVEDAAEANVVFSSLMG RVDFRKELIQKSASTMNLEHLDI
Sbjct: 681 LWETTMDPERRMLKQLAVEDAAEANVVFSSLMGVRVDFRKELIQKSASTMNLEHLDI 737

[Close]

BLAST of MELO3C019090 vs. NCBI nr
Match: gi|1009170748|ref|XP_015866364.1| (PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like [Ziziphus jujuba])

HSP 1 Score: 321.2 bits (822), Expect = 1.1e-84
Identity = 157/177 (88.70%), Postives = 167/177 (94.35%), Query Frame = 1


Query: 1   MYKNEEINNLIRALGLGFKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFFRYQKA 60
           MYKNEEI NLI  LGLG KGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFFRYQKA
Sbjct: 557 MYKNEEIQNLILGLGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFFRYQKA 616

Query: 61  LFEEGCIYVGVPPLFKVERGKQVYYCYDDKELKKVQSSFPSNASYNIQRFKGLGEMMPAQ 120
           LF+EGCIYVGVPPL+KVERGKQVYYCYDD EL+++QSSFP+NASYNIQRFKGLGEMMPAQ
Sbjct: 617 LFDEGCIYVGVPPLYKVERGKQVYYCYDDPELRELQSSFPANASYNIQRFKGLGEMMPAQ 676

Query: 121 LWETTMDPERRMLKQLAVEDAAEANVVFSSLMGARVDFRKELIQKSASTMNLEHLDI 178
           LWETTMDPERR+LKQL VEDAAEAN+VFSSLMGARVD RKELIQ SAS +NL+ LDI
Sbjct: 677 LWETTMDPERRLLKQLVVEDAAEANIVFSSLMGARVDVRKELIQNSASKINLDQLDI 733

[Close]

BLAST of MELO3C019090 vs. NCBI nr
Match: gi|75288399|sp|Q5YLB4.1|GYRB_NICBE (RecName: Full=DNA gyrase subunit B, chloroplastic/mitochondrial; Flags: Precursor)

HSP 1 Score: 321.2 bits (822), Expect = 1.1e-84
Identity = 159/177 (89.83%), Postives = 165/177 (93.22%), Query Frame = 1


Query: 1   MYKNEEINNLIRALGLGFKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFFRYQKA 60
           MYKNEEI NLI  LGLG KGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFFRYQ+A
Sbjct: 555 MYKNEEIQNLILGLGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFFRYQRA 614

Query: 61  LFEEGCIYVGVPPLFKVERGKQVYYCYDDKELKKVQSSFPSNASYNIQRFKGLGEMMPAQ 120
           LFEEGCIYVGVPPL+KVERGKQVYYCYDD ELKKVQ SFPSNASYNIQRFKGLGEMMPAQ
Sbjct: 615 LFEEGCIYVGVPPLYKVERGKQVYYCYDDAELKKVQRSFPSNASYNIQRFKGLGEMMPAQ 674

Query: 121 LWETTMDPERRMLKQLAVEDAAEANVVFSSLMGARVDFRKELIQKSASTMNLEHLDI 178
           LWETTM+PE R+LKQL VEDAAEANVVFSSLMG+RVD RK+LIQ SAS MNLE LDI
Sbjct: 675 LWETTMNPETRLLKQLVVEDAAEANVVFSSLMGSRVDIRKQLIQNSASMMNLEQLDI 731

The following BLAST results are available for this feature:

BLAST of MELO3C019090 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GYRB_NICBE	6.9e-87	89.83	DNA gyrase subunit B, chloroplastic/mitochondrial OS=Nicotiana benthamiana GN=GY...	[more]
GYRB_ORYSJ	1.6e-83	84.75	DNA gyrase subunit B, chloroplastic/mitochondrial OS=Oryza sativa subsp. japonic...	[more]
GYRBP_ARATH	4.8e-80	81.92	DNA gyrase subunit B, chloroplastic OS=Arabidopsis thaliana GN=GYRBC PE=2 SV=3	[more]
GYRBM_ARATH	2.0e-78	80.23	DNA gyrase subunit B, mitochondrial OS=Arabidopsis thaliana GN=GYRBM PE=2 SV=1	[more]
GYRB_SYNY3	8.0e-59	60.45	DNA gyrase subunit B OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=gyrB PE=...	[more]

BLAST of MELO3C019090 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L272_CUCSA	9.1e-94	97.74	DNA gyrase subunit B OS=Cucumis sativus GN=Csa_4G430890 PE=3 SV=1	[more]
B9IHQ8_POPTR	5.0e-84	86.44	DNA gyrase subunit B OS=Populus trichocarpa GN=POPTR_0016s03560g PE=3 SV=2	[more]
W9QCV3_9ROSA	1.9e-83	87.01	DNA gyrase subunit B OS=Morus notabilis GN=L484_003160 PE=3 SV=1	[more]
D7TIQ6_VITVI	1.9e-83	88.14	DNA gyrase subunit B OS=Vitis vinifera GN=VIT_08s0007g05120 PE=3 SV=1	[more]
K4DDP2_SOLLC	3.2e-83	88.14	DNA gyrase subunit B OS=Solanum lycopersicum PE=3 SV=1	[more]

BLAST of MELO3C019090 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G10270.1	2.7e-81	81.92	DNA GYRASE B1	[more]
AT5G04130.1	1.1e-79	80.23	DNA GYRASE B2	[more]
AT3G23890.1	8.1e-09	33.91	topoisomerase II	[more]

BLAST of MELO3C019090 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659111368\|ref\|XP_008455715.1\|	4.1e-95	100.00	PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like isoform X1 [Cu...	[more]
gi\|659111370\|ref\|XP_008455716.1\|	4.1e-95	100.00	PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like isoform X2 [Cu...	[more]
gi\|778694728\|ref\|XP_004144333.2\|	1.3e-93	97.74	PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial [Cucumis sativus]	[more]
gi\|1009170748\|ref\|XP_015866364.1\|	1.1e-84	88.70	PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like [Ziziphus juju...	[more]
gi\|75288399\|sp\|Q5YLB4.1\|GYRB_NICBE	1.1e-84	89.83	RecName: Full=DNA gyrase subunit B, chloroplastic/mitochondrial; Flags: Precurso...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000565	Topo_IIA_B
IPR001241	Topo_IIA
IPR002288	DNA_gyrase_B_C
IPR006171	TOPRIM_domain
IPR013759	Topo_IIA_B_C
IPR013760	Topo_IIA-like_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0003918	DNA topoisomerase type II (ATP-hydrolyzing) activity
GO:0005524	ATP binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006265	DNA topological change

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006265	DNA topological change
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005694	chromosome
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003918	DNA topoisomerase type II (ATP-hydrolyzing) activity

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU48775	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C019090T1	MELO3C019090T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU48775	MU48775	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000565	DNA topoisomerase, type IIA, subunit B	PRINTS	PR01159	DNAGYRASEB	coord: 128..140 score: 5.0E-8coord: 10..19 score: 5.0E-8coord: 144..160 score: 5.
IPR001241	DNA topoisomerase, type IIA	PRINTS	PR00418	TPI2FAMILY	coord: 107..123 score: 3.9E-27coord: 45..62 score: 3.9E-27coord: 65..77 score: 3.9E-27coord: 27..43 score: 3.9
IPR001241	DNA topoisomerase, type IIA	SMART	SM00433	topII5	coord: 1..168 score: 0.
IPR002288	DNA gyrase B subunit, C-terminal	PFAM	PF00986	DNA_gyraseB_C	coord: 103..164 score: 5.9
IPR006171	Toprim domain	PFAM	PF01751	Toprim	coord: 7..60 score: 7.
IPR006171	Toprim domain	PROFILE	PS50880	TOPRIM	coord: 1..65 score: 12
IPR013759	DNA topoisomerase, type IIA, central domain	GENE3D	G3DSA:3.40.50.670		coord: 1..156 score: 5.2
IPR013760	DNA topoisomerase, type IIA-like domain	unknown	SSF56719	Type II DNA topoisomerase	coord: 1..174 score: 9.15
None	No IPR available	PANTHER	PTHR10169	DNA TOPOISOMERASE/GYRASE	coord: 1..177 score: 1.2E
None	No IPR available	PANTHER	PTHR10169:SF35	DNA GYRASE B3-RELATED	coord: 1..177 score: 1.2E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C019090	Cla012104	Watermelon (97103) v1	mewmB577

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C019090	Cucumber (Gy14) v2	cgybmeB286
MELO3C019090	Silver-seed gourd	carmeB0224
MELO3C019090	Silver-seed gourd	carmeB0585
MELO3C019090	Cucumber (Chinese Long) v3	cucmeB337
MELO3C019090	Watermelon (97103) v2	mewmbB535
MELO3C019090	Wax gourd	mewgoB641
MELO3C019090	Cucumber (Gy14) v1	cgymeB068
MELO3C019090	Cucurbita maxima (Rimu)	cmameB612
MELO3C019090	Cucurbita maxima (Rimu)	cmameB802
MELO3C019090	Cucurbita moschata (Rifu)	cmomeB608
MELO3C019090	Cucurbita moschata (Rifu)	cmomeB786
MELO3C019090	Wild cucumber (PI 183967)	cpimeB331
MELO3C019090	Cucumber (Chinese Long) v2	cumeB272
MELO3C019090	Watermelon (Charleston Gray)	mewcgB527
MELO3C019090	Cucurbita pepo (Zucchini)	cpemeB063
MELO3C019090	Cucurbita pepo (Zucchini)	cpemeB461
MELO3C019090	Bottle gourd (USVL1VR-Ls)	lsimeB158