MELO3C019078 (gene) Melon (DHL92) v3.5.1

NameMELO3C019078
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionZinc finger mynd domain-containing protein 10-like
Locationchr8 : 11372560 .. 11373263 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAATAGGAGTTTTGATTCAGCAATTTGATATCGATGTGACTCAAGAATACATCCACTCGTATAATATTACAAGGCTCTACATCACTCAACTAGGAGCAACTGTGAGTCATCTGGTACATATTTAAATATTGTATAATTACTTACATTATTTACTCAATTAAATATTTTTATTTTATTTTACAATTTATAGAGATCGAACAATGCAAGACTTCGTGATGTTGCAGATGATTCACAACAAGTCCTTGACATATGTAATAATAATAAGAGGCACATGGAGGAGATACATAATATGTACCATCTACCTATTGTACCTCCACAAATTCATAGGGGACGTGTTCAAGTGGAAGAAGCTGAACTTGATGAAGTTTACCATAATGTGGAAGAAATGACTCCTACGACACAAAAACAAAACCAAACCGGTTATGGTAGTCCGATGATAATGATGCCAACATTTGGAGTAGGGTATTGTGATTTTGAGGTTAATACAGAGTATTATGATTCAGGGGTCGGTCCATCATCTTCATACATGGATGTCGGTCCATCAACTTCTTACATGCATGGACACAGACATGACTATGGGGAACATAACGAATATCTGTATCATGAAGCACCTACAGAGGTATCAGATCGACAAGAGTACCAACAAGAACCAGAGAATCAAGAGGAGTTAGAACAACATAGAGTTCAGAGTCGACATTGA

mRNA sequence

ATGGCAATAGGAGTTTTGATTCAGCAATTTGATATCGATGTGACTCAAGAATACATCCACTCGTATAATATTACAAGGCTCTACATCACTCAACTAGGAGCAACTGTGAGTCATCTGAGATCGAACAATGCAAGACTTCGTGATGTTGCAGATGATTCACAACAAGTCCTTGACATATGTAATAATAATAAGAGGCACATGGAGGAGATACATAATATGTACCATCTACCTATTGTACCTCCACAAATTCATAGGGGACGTGTTCAAGTGGAAGAAGCTGAACTTGATGAAGTTTACCATAATGTGGAAGAAATGACTCCTACGACACAAAAACAAAACCAAACCGGTTATGGTAGTCCGATGATAATGATGCCAACATTTGGAGTAGGGTATTGTGATTTTGAGGTTAATACAGAGTATTATGATTCAGGGGTCGGTCCATCATCTTCATACATGGATGTCGGTCCATCAACTTCTTACATGCATGGACACAGACATGACTATGGGGAACATAACGAATATCTGTATCATGAAGCACCTACAGAGGTATCAGATCGACAAGAGTACCAACAAGAACCAGAGAATCAAGAGGAGTTAGAACAACATAGAGTTCAGAGTCGACATTGA

Coding sequence (CDS)

ATGGCAATAGGAGTTTTGATTCAGCAATTTGATATCGATGTGACTCAAGAATACATCCACTCGTATAATATTACAAGGCTCTACATCACTCAACTAGGAGCAACTGTGAGTCATCTGAGATCGAACAATGCAAGACTTCGTGATGTTGCAGATGATTCACAACAAGTCCTTGACATATGTAATAATAATAAGAGGCACATGGAGGAGATACATAATATGTACCATCTACCTATTGTACCTCCACAAATTCATAGGGGACGTGTTCAAGTGGAAGAAGCTGAACTTGATGAAGTTTACCATAATGTGGAAGAAATGACTCCTACGACACAAAAACAAAACCAAACCGGTTATGGTAGTCCGATGATAATGATGCCAACATTTGGAGTAGGGTATTGTGATTTTGAGGTTAATACAGAGTATTATGATTCAGGGGTCGGTCCATCATCTTCATACATGGATGTCGGTCCATCAACTTCTTACATGCATGGACACAGACATGACTATGGGGAACATAACGAATATCTGTATCATGAAGCACCTACAGAGGTATCAGATCGACAAGAGTACCAACAAGAACCAGAGAATCAAGAGGAGTTAGAACAACATAGAGTTCAGAGTCGACATTGA

Protein sequence

MAIGVLIQQFDIDVTQEYIHSYNITRLYITQLGATVSHLRSNNARLRDVADDSQQVLDICNNNKRHMEEIHNMYHLPIVPPQIHRGRVQVEEAELDEVYHNVEEMTPTTQKQNQTGYGSPMIMMPTFGVGYCDFEVNTEYYDSGVGPSSSYMDVGPSTSYMHGHRHDYGEHNEYLYHEAPTEVSDRQEYQQEPENQEELEQHRVQSRH*
BLAST of MELO3C019078 vs. TrEMBL
Match: A0A0A0KDI9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G014710 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 4.9e-14
Identity = 42/73 (57.53%), Postives = 52/73 (71.23%), Query Frame = 1

Query: 41  SNNARLRDVADDSQQVLDICNNNKRHMEEIHNMYHLPIVPPQIHRGRVQVEEAELDEVYH 100
           SNN  L DVAD  Q +LDI NNN+R+MEEIH      IVPP + RG V+VEE ELDE+YH
Sbjct: 18  SNNISLHDVADVQQHILDISNNNERYMEEIHY-----IVPPSVRRGHVRVEEVELDEIYH 77

Query: 101 NVEEMTPTTQKQN 114
           N++E+ P  Q Q+
Sbjct: 78  NLKELHPMIQTQS 85

BLAST of MELO3C019078 vs. NCBI nr
Match: gi|659069376|ref|XP_008449513.1| (PREDICTED: GATA zinc finger domain-containing protein 10-like [Cucumis melo])

HSP 1 Score: 208.8 bits (530), Expect = 9.4e-51
Identity = 122/238 (51.26%), Postives = 156/238 (65.55%), Query Frame = 1

Query: 2   AIGVLIQQFDIDVTQEYIHSY-NITRLYITQLGATVSHLRSNNARLRDVADDSQQVLDIC 61
           A G  I+QFD+DVTQEYIH Y NI++LYITQ GA +SHLRSNN RLR++ADD QQVL+IC
Sbjct: 11  ATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNTRLRNIADDPQQVLNIC 70

Query: 62  NNNKRHMEEIHNMYHLPIVPPQIHRGRVQVEEA-ELDEVYHNVEEMTPTTQKQNQT--GY 121
           N+N+++ME IH MY +PIVP  + R R  V+E+ +L+EV  + EE+ P TQ Q Q+   Y
Sbjct: 71  NDNEQYMENIHYMYDVPIVPAPVQRRRPLVQESDQLEEVDQHGEEVPPMTQTQTQSEHNY 130

Query: 122 GSPMIMMPTFGVGYCDFEVNTE------YYDSGVGPSSS-----YMDVG--PSTSYMHGH 181
            SP++MMPTFG+ Y D  V         YY+S  G SS+     Y D+G  PS+SYMHGH
Sbjct: 131 VSPVMMMPTFGMTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDPSSSYMHGH 190

Query: 182 RHDYGEHNEYLYHEAPT---EVSDRQEY------------QQEPENQEELEQHRVQSR 208
               GEHNEYLY++ P    E SD Q+             QQ+ EN EE++Q RVQ R
Sbjct: 191 GRGRGEHNEYLYYKVPAAVPEQSDEQQQQENAAVPEQSDEQQQQENHEEIQQQRVQIR 248

BLAST of MELO3C019078 vs. NCBI nr
Match: gi|659126257|ref|XP_008463092.1| (PREDICTED: serine/threonine-protein phosphatase 7 long form homolog [Cucumis melo])

HSP 1 Score: 89.0 bits (219), Expect = 1.1e-14
Identity = 45/64 (70.31%), Postives = 55/64 (85.94%), Query Frame = 1

Query: 2   AIGVLIQQFDIDVTQEYIHSY-NITRLYITQLGATVSHLRSNNARLRDVADDSQQVLDIC 61
           A G  I+QFD+DVTQEYI+ Y NI++LYITQ GA +SHLRSNN RLR+VADD QQVL+IC
Sbjct: 102 ATGPPIEQFDMDVTQEYINWYKNISKLYITQPGAAMSHLRSNNIRLRNVADDPQQVLNIC 161

Query: 62  NNNK 65
           N+N+
Sbjct: 162 NDNE 165

BLAST of MELO3C019078 vs. NCBI nr
Match: gi|700190647|gb|KGN45851.1| (hypothetical protein Csa_6G014710 [Cucumis sativus])

HSP 1 Score: 86.3 bits (212), Expect = 7.1e-14
Identity = 42/73 (57.53%), Postives = 52/73 (71.23%), Query Frame = 1

Query: 41  SNNARLRDVADDSQQVLDICNNNKRHMEEIHNMYHLPIVPPQIHRGRVQVEEAELDEVYH 100
           SNN  L DVAD  Q +LDI NNN+R+MEEIH      IVPP + RG V+VEE ELDE+YH
Sbjct: 18  SNNISLHDVADVQQHILDISNNNERYMEEIHY-----IVPPSVRRGHVRVEEVELDEIYH 77

Query: 101 NVEEMTPTTQKQN 114
           N++E+ P  Q Q+
Sbjct: 78  NLKELHPMIQTQS 85

BLAST of MELO3C019078 vs. NCBI nr
Match: gi|659123450|ref|XP_008461670.1| (PREDICTED: CASP-like protein RCOM_0464280 isoform X1 [Cucumis melo])

HSP 1 Score: 73.2 bits (178), Expect = 6.2e-10
Identity = 42/82 (51.22%), Postives = 59/82 (71.95%), Query Frame = 1

Query: 25  TRLYITQLGATVSHLRSNNARLRDVADDSQQVLDICNNNKRHMEEIHNMYHLPIVPPQIH 84
           T L IT  G T +  RS N RL++VADD QQVL+ICN+N+++ME IH MY++ IVP  + 
Sbjct: 148 TALAITLKG-TDTCKRSKNIRLQNVADDPQQVLNICNDNEQYMENIHYMYNVLIVPALVQ 207

Query: 85  RGRVQVEEA-ELDEVYHNVEEM 106
           R R  V+E+ +L+EV  +VEE+
Sbjct: 208 RRRPLVQESNQLEEVVQHVEEV 228

BLAST of MELO3C019078 vs. NCBI nr
Match: gi|659123452|ref|XP_008461671.1| (PREDICTED: CASP-like protein RCOM_0464280 isoform X2 [Cucumis melo])

HSP 1 Score: 73.2 bits (178), Expect = 6.2e-10
Identity = 42/82 (51.22%), Postives = 59/82 (71.95%), Query Frame = 1

Query: 25  TRLYITQLGATVSHLRSNNARLRDVADDSQQVLDICNNNKRHMEEIHNMYHLPIVPPQIH 84
           T L IT  G T +  RS N RL++VADD QQVL+ICN+N+++ME IH MY++ IVP  + 
Sbjct: 141 TALAITLKG-TDTCKRSKNIRLQNVADDPQQVLNICNDNEQYMENIHYMYNVLIVPALVQ 200

Query: 85  RGRVQVEEA-ELDEVYHNVEEM 106
           R R  V+E+ +L+EV  +VEE+
Sbjct: 201 RRRPLVQESNQLEEVVQHVEEV 221

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KDI9_CUCSA4.9e-1457.53Uncharacterized protein OS=Cucumis sativus GN=Csa_6G014710 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|659069376|ref|XP_008449513.1|9.4e-5151.26PREDICTED: GATA zinc finger domain-containing protein 10-like [Cucumis melo][more]
gi|659126257|ref|XP_008463092.1|1.1e-1470.31PREDICTED: serine/threonine-protein phosphatase 7 long form homolog [Cucumis mel... [more]
gi|700190647|gb|KGN45851.1|7.1e-1457.53hypothetical protein Csa_6G014710 [Cucumis sativus][more]
gi|659123450|ref|XP_008461670.1|6.2e-1051.22PREDICTED: CASP-like protein RCOM_0464280 isoform X1 [Cucumis melo][more]
gi|659123452|ref|XP_008461671.1|6.2e-1051.22PREDICTED: CASP-like protein RCOM_0464280 isoform X2 [Cucumis melo][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C019078T1MELO3C019078T1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None