MELO3C019072 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C019072
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionProtein of unknown function (DUF1216)
Locationchr8 : 11182798 .. 11183440 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CACCCCCGCCCTCTCATTCTCTCCCCTCTCTCTTTCTCTCTCTTCACCGTAACATCAAAACACTACGTCCCTTCATTCTCCGGTCATTGCCGGCCGACAAAAATCAATTCTTTTCTTGTGGGTGTTTTGTTAGAGATTAAAACTCCACGACTTTACTCCGATATGCACGGGAAGAAAACCCTATTGGGTTGTATCCAAATTTTGCTTTTGGCGGCGACGGGCGGGGGCGGTGGAGTTTGATGGTGAGGGGATTTTTTAGTTTGAGATCGGTGGCAATGTTGATTGTTCTGGCGGTGTCTCTTTTGATATTGCCACTTGTGCTGCCGCCGTTGCCGCCTCCACCGGTATTGCTGCTGTTTGTTCCGGTCTTGATTATGTCGTTGCTTTTGTTCTTAGCTTTGTCGCCATCGGAGGCCCCAGCGGAGGGGCACCGTGGGACTGACAGCGACGGCGGGTACAACTCGGCTTGATTTTTTTTTCTTTTTTTTTGTTGTTGATTAGAAAATATATATAGTGGGAGGATGATGAAATTGGATGTTGGATTTTCAATATTTGGTTCTTGATTTGTTCTTCTTTGTTCTTCTTTGTTCAATGTATAATGAAATTTTTTTAGTGTAGTTGAATGTTTTTTTCCGTTGGGACG

mRNA sequence

CACCCCCGCCCTCTCATTCTCTCCCCTCTCTCTTTCTCTCTCTTCACCGTAACATCAAAACACTACGTCCCTTCATTCTCCGGTCATTGCCGGCCGACAAAAATCAATTCTTTTCTTGTGGGTGTTTTGTTAGAGATTAAAACTCCACGACTTTACTCCGATATGCACGGGAAGAAAACCCTATTGGGTTGTATCCAAATTTTGCTTTTGGCGGCGACGGGCGGGGGCGGTGGAGTTTGATGGTGAGGGGATTTTTTAGTTTGAGATCGGTGGCAATGTTGATTGTTCTGGCGGTGTCTCTTTTGATATTGCCACTTGTGCTGCCGCCGTTGCCGCCTCCACCGGTATTGCTGCTGTTTGTTCCGGTCTTGATTATGTCGTTGCTTTTGTTCTTAGCTTTGTCGCCATCGGAGGCCCCAGCGGAGGGGCACCGTGGGACTGACAGCGACGGCGGGTACAACTCGGCTTGATTTTTTTTTCTTTTTTTTTGTTGTTGATTAGAAAATATATATAGTGGGAGGATGATGAAATTGGATGTTGGATTTTCAATATTTGGTTCTTGATTTGTTCTTCTTTGTTCTTCTTTGTTCAATGTATAATGAAATTTTTTTAGTGTAGTTGAATGTTTTTTTCCGTTGGGACG

Coding sequence (CDS)

ATGGTGAGGGGATTTTTTAGTTTGAGATCGGTGGCAATGTTGATTGTTCTGGCGGTGTCTCTTTTGATATTGCCACTTGTGCTGCCGCCGTTGCCGCCTCCACCGGTATTGCTGCTGTTTGTTCCGGTCTTGATTATGTCGTTGCTTTTGTTCTTAGCTTTGTCGCCATCGGAGGCCCCAGCGGAGGGGCACCGTGGGACTGACAGCGACGGCGGGTACAACTCGGCTTGA

Protein sequence

MVRGFFSLRSVAMLIVLAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSEAPAEGHRGTDSDGGYNSA*
Homology
[Close]
BLAST of MELO3C019072 vs. Swiss-Prot
Match: ARGOS_ORYSJ (Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE OS=Oryza sativa subsp. japonica GN=ARGOS PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 4.1e-12
Identity = 34/72 (47.22%), Postives = 45/72 (62.50%), Query Frame = 1 

Query: 5   FFSLRSVAMLIVLAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSEAPAEGH 64
           +FS+ S+ +L+ +  SL+ILPLVLPPLPPPP +L+ VPV ++ LLL LA  P+   +   
Sbjct: 99  YFSVESLLLLVCVTASLVILPLVLPPLPPPPSMLMLVPVAMLVLLLALAFMPTTTSSSSS 158

Query: 65  RGTDSDGGYNSA 77
            G    GG N A
Sbjct: 159 AGGGGGGGRNGA 170

[Close]
BLAST of MELO3C019072 vs. Swiss-Prot
Match: ARGOS_BRARP (Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE OS=Brassica rapa subsp. pekinensis GN=ARGOS PE=2 SV=2)

HSP 1 Score: 70.5 bits (171), Expect = 9.2e-12
Identity = 34/55 (61.82%), Postives = 40/55 (72.73%), Query Frame = 1 

Query: 5   FFSLRSVAMLIVLAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSEA 60
           +FSL S+ +L+ L  SLLILPLVLPPLPPPP +LL VP+ IM LL+ LA  PS +
Sbjct: 71  YFSLESLVILVGLTASLLILPLVLPPLPPPPFMLLLVPIGIMVLLIILAFMPSSS 125

[Close]
BLAST of MELO3C019072 vs. Swiss-Prot
Match: ORS1_ARATH (Protein ORGAN SIZE RELATED 1 OS=Arabidopsis thaliana GN=ORS1 PE=2 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 2.1e-11
Identity = 33/53 (62.26%), Postives = 40/53 (75.47%), Query Frame = 1 

Query: 9  RSVAMLIVLAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSEAPA 62
          RSVA+L+ L++ LLILP  LPPLPPPP  LL +P+L+M LL+FLA SPS  P+
Sbjct: 28 RSVALLLFLSLLLLILPPFLPPLPPPPATLLLLPLLLMILLIFLAFSPSNEPS 80

[Close]
BLAST of MELO3C019072 vs. Swiss-Prot
Match: ARGOS_ARATH (Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE OS=Arabidopsis thaliana GN=ARGOS PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 2.7e-11
Identity = 34/53 (64.15%), Postives = 39/53 (73.58%), Query Frame = 1 

Query: 5   FFSLRSVAMLIVLAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPS 58
           +FSL S+ +L+ L  SLLILPLVLPPLPPPP +LL VP+ IM LL+ LA  PS
Sbjct: 64  YFSLESLFLLVGLTASLLILPLVLPPLPPPPFMLLLVPIGIMVLLVVLAFMPS 116

[Close]
BLAST of MELO3C019072 vs. Swiss-Prot
Match: ARL_ARATH (ARGOS-like protein OS=Arabidopsis thaliana GN=ARL PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 2.7e-11
Identity = 32/53 (60.38%), Postives = 39/53 (73.58%), Query Frame = 1 

Query: 5   FFSLRSVAMLIVLAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPS 58
           +FSL S+ +L+ L  SLLILPL+LPPLPPPP +LL +P+ IM LL+ LA  PS
Sbjct: 70  YFSLESMVVLVGLTASLLILPLILPPLPPPPFMLLLIPIGIMVLLMVLAFMPS 122

[Close]
BLAST of MELO3C019072 vs. TrEMBL
Match: A0A0A0L0Y7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G432970 PE=4 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 7.8e-26
Identity = 66/76 (86.84%), Postives = 67/76 (88.16%), Query Frame = 1 

Query: 1  MVRGFFSLRSVAMLIVLAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSEAP 60
          MVRGFFSLRSVAMLIV+AVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSE P
Sbjct: 1  MVRGFFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSEVP 60

Query: 61 AEGHRGTDSDGGYNSA 77
          AE H  TD     NSA
Sbjct: 61 AEEHHETDGGDEDNSA 76

[Close]
BLAST of MELO3C019072 vs. TrEMBL
Match: U5G936_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s03620g PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 5.8e-13
Identity = 39/53 (73.58%), Postives = 46/53 (86.79%), Query Frame = 1 

Query: 7  SLRSVAMLIVLAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSEA 60
          SLRS+  ++VL VSLL+LPLVLPPL PPP+L LF+PV IM LLLFLALSPS+A
Sbjct: 6  SLRSIVTMVVLTVSLLVLPLVLPPLSPPPLLFLFIPVFIMILLLFLALSPSQA 58

[Close]
BLAST of MELO3C019072 vs. TrEMBL
Match: U5G5G3_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0006s03610g PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 2.9e-12
Identity = 37/56 (66.07%), Postives = 47/56 (83.93%), Query Frame = 1 

Query: 5   FFSLRSVAMLIVLAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSEAP 61
           +F   +V +++VL V LL+LPLVLPPLPPPP++LLFVPV IMSLL+FLA SPS+ P
Sbjct: 74  YFKSIAVMVMVVLTVFLLVLPLVLPPLPPPPLVLLFVPVFIMSLLVFLAFSPSKLP 129

[Close]
BLAST of MELO3C019072 vs. TrEMBL
Match: U5GSR8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s06620g PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 1.9e-11
Identity = 37/56 (66.07%), Postives = 47/56 (83.93%), Query Frame = 1 

Query: 6  FSLRSVAMLIVLAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSEAPA 62
          FS+ SV +L VLA S+ +LPL+LPPLPPPP++LLF PV IM+ L+FLALSPS+A A
Sbjct: 5  FSIVSVLILTVLAASMAVLPLMLPPLPPPPLILLFFPVGIMAALMFLALSPSDAAA 60

[Close]
BLAST of MELO3C019072 vs. TrEMBL
Match: A0A068UM56_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00028963001 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 4.2e-11
Identity = 34/65 (52.31%), Postives = 51/65 (78.46%), Query Frame = 1 

Query: 5  FFSLRSVAMLIVLAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSEAPA-EG 64
          +F+ + + +++V  ++LL+LPLVLPPLPPPPVL+LFVPVL+++LLL+ A  PS+ P  E 
Sbjct: 35 YFNAKGIGIMVVSTLALLLLPLVLPPLPPPPVLVLFVPVLLLALLLYFAFLPSKVPTLEI 94

Query: 65 HRGTD 69
          + G D
Sbjct: 95 NSGND 99

[Close]
BLAST of MELO3C019072 vs. TAIR10
Match: AT2G41230.1 (AT2G41230.1 unknown protein)

HSP 1 Score: 69.3 bits (168), Expect = 1.2e-12
Identity = 33/53 (62.26%), Postives = 40/53 (75.47%), Query Frame = 1 

Query: 9  RSVAMLIVLAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSEAPA 62
          RSVA+L+ L++ LLILP  LPPLPPPP  LL +P+L+M LL+FLA SPS  P+
Sbjct: 28 RSVALLLFLSLLLLILPPFLPPLPPPPATLLLLPLLLMILLIFLAFSPSNEPS 80

[Close]
BLAST of MELO3C019072 vs. TAIR10
Match: AT2G44080.1 (AT2G44080.1 ARGOS-like)

HSP 1 Score: 68.9 bits (167), Expect = 1.5e-12
Identity = 32/53 (60.38%), Postives = 39/53 (73.58%), Query Frame = 1 

Query: 5   FFSLRSVAMLIVLAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPS 58
           +FSL S+ +L+ L  SLLILPL+LPPLPPPP +LL +P+ IM LL+ LA  PS
Sbjct: 70  YFSLESMVVLVGLTASLLILPLILPPLPPPPFMLLLIPIGIMVLLMVLAFMPS 122

[Close]
BLAST of MELO3C019072 vs. TAIR10
Match: AT3G59900.1 (AT3G59900.1 auxin-regulated gene involved in organ size)

HSP 1 Score: 68.9 bits (167), Expect = 1.5e-12
Identity = 34/53 (64.15%), Postives = 39/53 (73.58%), Query Frame = 1 

Query: 5   FFSLRSVAMLIVLAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPS 58
           +FSL S+ +L+ L  SLLILPLVLPPLPPPP +LL VP+ IM LL+ LA  PS
Sbjct: 64  YFSLESLFLLVGLTASLLILPLVLPPLPPPPFMLLLVPIGIMVLLVVLAFMPS 116

[Close]
BLAST of MELO3C019072 vs. TAIR10
Match: AT2G41225.1 (AT2G41225.1 unknown protein)

HSP 1 Score: 52.0 bits (123), Expect = 1.9e-07
Identity = 21/39 (53.85%), Postives = 31/39 (79.49%), Query Frame = 1 

Query: 16 VLAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLAL 55
          V+ V L +LP VLPPLPPPP++L+ +PV++M +L++LA+
Sbjct: 6  VVMVLLAVLPAVLPPLPPPPMILMGIPVVLMLMLIYLAI 44

[Close]
BLAST of MELO3C019072 vs. NCBI nr
Match: gi|700199561|gb|KGN54719.1| (hypothetical protein Csa_4G432970 [Cucumis sativus])

HSP 1 Score: 124.0 bits (310), Expect = 1.1e-25
Identity = 66/76 (86.84%), Postives = 67/76 (88.16%), Query Frame = 1 

Query: 1  MVRGFFSLRSVAMLIVLAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSEAP 60
          MVRGFFSLRSVAMLIV+AVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSE P
Sbjct: 1  MVRGFFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSEVP 60

Query: 61 AEGHRGTDSDGGYNSA 77
          AE H  TD     NSA
Sbjct: 61 AEEHHETDGGDEDNSA 76

[Close]
BLAST of MELO3C019072 vs. NCBI nr
Match: gi|566174296|ref|XP_006380977.1| (hypothetical protein POPTR_0006s03620g [Populus trichocarpa])

HSP 1 Score: 81.3 bits (199), Expect = 8.4e-13
Identity = 39/53 (73.58%), Postives = 46/53 (86.79%), Query Frame = 1 

Query: 7  SLRSVAMLIVLAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSEA 60
          SLRS+  ++VL VSLL+LPLVLPPL PPP+L LF+PV IM LLLFLALSPS+A
Sbjct: 6  SLRSIVTMVVLTVSLLVLPLVLPPLSPPPLLFLFIPVFIMILLLFLALSPSQA 58

[Close]
BLAST of MELO3C019072 vs. NCBI nr
Match: gi|566174294|ref|XP_006380976.1| (hypothetical protein POPTR_0006s03610g, partial [Populus trichocarpa])

HSP 1 Score: 79.0 bits (193), Expect = 4.1e-12
Identity = 37/56 (66.07%), Postives = 47/56 (83.93%), Query Frame = 1 

Query: 5   FFSLRSVAMLIVLAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSEAP 61
           +F   +V +++VL V LL+LPLVLPPLPPPP++LLFVPV IMSLL+FLA SPS+ P
Sbjct: 74  YFKSIAVMVMVVLTVFLLVLPLVLPPLPPPPLVLLFVPVFIMSLLVFLAFSPSKLP 129

[Close]
BLAST of MELO3C019072 vs. NCBI nr
Match: gi|566147586|ref|XP_006368625.1| (hypothetical protein POPTR_0001s06620g [Populus trichocarpa])

HSP 1 Score: 76.3 bits (186), Expect = 2.7e-11
Identity = 37/56 (66.07%), Postives = 47/56 (83.93%), Query Frame = 1 

Query: 6  FSLRSVAMLIVLAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSEAPA 62
          FS+ SV +L VLA S+ +LPL+LPPLPPPP++LLF PV IM+ L+FLALSPS+A A
Sbjct: 5  FSIVSVLILTVLAASMAVLPLMLPPLPPPPLILLFFPVGIMAALMFLALSPSDAAA 60

[Close]
BLAST of MELO3C019072 vs. NCBI nr
Match: gi|661886828|emb|CDP09546.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 75.1 bits (183), Expect = 6.0e-11
Identity = 34/65 (52.31%), Postives = 51/65 (78.46%), Query Frame = 1 

Query: 5  FFSLRSVAMLIVLAVSLLILPLVLPPLPPPPVLLLFVPVLIMSLLLFLALSPSEAPA-EG 64
          +F+ + + +++V  ++LL+LPLVLPPLPPPPVL+LFVPVL+++LLL+ A  PS+ P  E 
Sbjct: 35 YFNAKGIGIMVVSTLALLLLPLVLPPLPPPPVLVLFVPVLLLALLLYFAFLPSKVPTLEI 94

Query: 65 HRGTD 69
          + G D
Sbjct: 95 NSGND 99

The following BLAST results are available for this feature:
BLAST of MELO3C019072 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ARGOS_ORYSJ4.1e-1247.22Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE OS=Oryza sativa subsp. japon... [more]
ARGOS_BRARP9.2e-1261.82Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE OS=Brassica rapa subsp. peki... [more]
ORS1_ARATH2.1e-1162.26Protein ORGAN SIZE RELATED 1 OS=Arabidopsis thaliana GN=ORS1 PE=2 SV=1[more]
ARGOS_ARATH2.7e-1164.15Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE OS=Arabidopsis thaliana GN=A... [more]
ARL_ARATH2.7e-1160.38ARGOS-like protein OS=Arabidopsis thaliana GN=ARL PE=2 SV=1[more]
BLAST of MELO3C019072 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L0Y7_CUCSA7.8e-2686.84Uncharacterized protein OS=Cucumis sativus GN=Csa_4G432970 PE=4 SV=1[more]
U5G936_POPTR5.8e-1373.58Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s03620g PE=4 SV=1[more]
U5G5G3_POPTR2.9e-1266.07Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0006s03610g P... [more]
U5GSR8_POPTR1.9e-1166.07Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s06620g PE=4 SV=1[more]
A0A068UM56_COFCA4.2e-1152.31Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00028963001 PE=4 SV=1[more]
BLAST of MELO3C019072 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G41230.11.2e-1262.26 unknown protein[more]
AT2G44080.11.5e-1260.38 ARGOS-like[more]
AT3G59900.11.5e-1264.15 auxin-regulated gene involved in organ size[more]
AT2G41225.11.9e-0753.85 unknown protein[more]
BLAST of MELO3C019072 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700199561|gb|KGN54719.1|1.1e-2586.84hypothetical protein Csa_4G432970 [Cucumis sativus][more]
gi|566174296|ref|XP_006380977.1|8.4e-1373.58hypothetical protein POPTR_0006s03620g [Populus trichocarpa][more]
gi|566174294|ref|XP_006380976.1|4.1e-1266.07hypothetical protein POPTR_0006s03610g, partial [Populus trichocarpa][more]
gi|566147586|ref|XP_006368625.1|2.7e-1166.07hypothetical protein POPTR_0001s06620g [Populus trichocarpa][more]
gi|661886828|emb|CDP09546.1|6.0e-1152.31unnamed protein product [Coffea canephora][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU57894melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C019072T1MELO3C019072T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU57894MU57894transcribed_cluster


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C019072Cucumber (Gy14) v2cgybmeB286
MELO3C019072Cucumber (Chinese Long) v3cucmeB337
MELO3C019072Watermelon (97103) v2mewmbB536
MELO3C019072Wax gourdmewgoB641
MELO3C019072Cucumber (Gy14) v1cgymeB068
MELO3C019072Cucurbita maxima (Rimu)cmameB612
MELO3C019072Cucurbita moschata (Rifu)cmomeB608
MELO3C019072Wild cucumber (PI 183967)cpimeB331
MELO3C019072Cucumber (Chinese Long) v2cumeB272
MELO3C019072Watermelon (Charleston Gray)mewcgB528
MELO3C019072Cucurbita pepo (Zucchini)cpemeB063
MELO3C019072Bottle gourd (USVL1VR-Ls)lsimeB158