MELO3C019071 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C019071
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
Descriptioncyclic nucleotide-binding transporter 1
Locationchr8 : 11104507 .. 11104765 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GTGCTTAGCTGTTGTTGTCATGCCAAGAAGAGGAAGAGGTGGTGGACAAGCTTCGAAAGCAGAACAATTGGTTAATGTGCAAGCAATGAGAGAAAGAGATGAGCAATTGTTTGCTAAGGTGAATTTGGAGAAGCAATTTAGCATAGAAAGATTGAAGGCAATAGGAGCCATGAATTTCGAAGGGACTGCGAATCTAGCTAACGTGGAAAAGTGGTTAAGCTTAGTAGAAAAGCACTTTGGAGTAATGGATTGTCCTTAA

mRNA sequence

GTGCTTAGCTGTTGTTGTCATGCCAAGAAGAGGAAGAGGTGGTGGACAAGCTTCGAAAGCAGAACAATTGGTTAATGTGCAAGCAATGAGAGAAAGAGATGAGCAATTGTTTGCTAAGGTGAATTTGGAGAAGCAATTTAGCATAGAAAGATTGAAGGCAATAGGAGCCATGAATTTCGAAGGGACTGCGAATCTAGCTAACGTGGAAAAGTGGTTAAGCTTAGTAGAAAAGCACTTTGGAGTAATGGATTGTCCTTAA

Coding sequence (CDS)

GTGCTTAGCTGTTGTTGTCATGCCAAGAAGAGGAAGAGGTGGTGGACAAGCTTCGAAAGCAGAACAATTGGTTAATGTGCAAGCAATGAGAGAAAGAGATGAGCAATTGTTTGCTAAGGTGAATTTGGAGAAGCAATTTAGCATAGAAAGATTGAAGGCAATAGGAGCCATGAATTTCGAAGGGACTGCGAATCTAGCTAACGTGGAAAAGTGGTTAAGCTTAGTAGAAAAGCACTTTGGAGTAATGGATTGTCCTTAA

Protein sequence

CLAVVVMPRRGRGGGQASKAEQLVNVQAMRERDEQLFAKVNLEKQFSIERLKAIGAMNFEGTANLANVEKWLSLVEKHFGVMDCP*
Homology
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BLAST of MELO3C019071 vs. NCBI nr
Match: gi|659098594|ref|XP_008450217.1| (PREDICTED: uncharacterized protein LOC103491879 [Cucumis melo])

HSP 1 Score: 58.2 bits (139), Expect = 8.5e-06
Identity = 30/61 (49.18%), Postives = 40/61 (65.57%), Query Frame = 1 

Query: 30 RERDEQLFAKVNLE-----KQFSIERLKAIGAMNFEGTANLANVEKWLSLVEKHFGVMDC 86
          RER E L  +V        KQFSI+RLKA+  M FEGT   +N ++W++LVEK FGV++ 
Sbjct: 31 RERGEMLLERVEQPLSKSGKQFSIKRLKAVRVMTFEGTTYPSNAKRWMNLVEKCFGVLEW 90

The following BLAST results are available for this feature:
BLAST of MELO3C019071 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659098594|ref|XP_008450217.1|8.5e-0649.18PREDICTED: uncharacterized protein LOC103491879 [Cucumis melo][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C019071T1MELO3C019071T1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C019071Cucurbita maxima (Rimu)cmameB612
MELO3C019071Cucurbita moschata (Rifu)cmomeB608
MELO3C019071Wild cucumber (PI 183967)cpimeB331
MELO3C019071Cucumber (Chinese Long) v2cumeB272
MELO3C019071Watermelon (Charleston Gray)mewcgB528
MELO3C019071Cucurbita pepo (Zucchini)cpemeB063
MELO3C019071Bottle gourd (USVL1VR-Ls)lsimeB158
MELO3C019071Cucumber (Gy14) v2cgybmeB286
MELO3C019071Cucumber (Chinese Long) v3cucmeB337
MELO3C019071Watermelon (97103) v2mewmbB536
MELO3C019071Wax gourdmewgoB641
MELO3C019071Cucumber (Gy14) v1cgymeB068