MELO3C019005 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C019005
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Location	chr7 : 15323472 .. 15323633 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTTGTCTCGTATAGGAGTTCACGATGTCACCGGTGTCGAGTTGATTGATTCGCCTCCTTTGGTGAGTCGTGTTGATCCTCATAATTTGCCTTTCTTTGATCATGTTTTTGATTTGGCGTTTACTGCTCATTTGGCTGAGGCGTTGTTTCCGTCTTGA

mRNA sequence

ATGGCGTTGTCTCGTATAGGAGTTCACGATGTCACCGGTGTCGAGTTGATTGATTCGCCTCCTTTGGTGAGTCGTGTTGATCCTCATAATTTGCCTTTCTTTGATCATGTTTTTGATTTGGCGTTTACTGCTCATTTGGCTGAGGCGTTGTTTCCGTCTTGA

Coding sequence (CDS)

ATGGCGTTGTCTCGTATAGGAGTTCACGATGTCACCGGTGTCGAGTTGATTGATTCGCCTCCTTTGGTGAGTCGTGTTGATCCTCATAATTTGCCTTTCTTTGATCATGTTTTTGATTTGGCGTTTACTGCTCATTTGGCTGAGGCGTTGTTTCCGTCTTGA

Protein sequence

MALSRIGVHDVTGVELIDSPPLVSRVDPHNLPFFDHVFDLAFTAHLAEALFPS*

Homology

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BLAST of MELO3C019005 vs. TrEMBL
Match: A0A0A0K6X5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G045500 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 9.1e-21
Identity = 50/53 (94.34%), Postives = 52/53 (98.11%), Query Frame = 1


Query: 1   MALSRIGVHDVTGVELIDSPPLVSRVDPHNLPFFDHVFDLAFTAHLAEALFPS 54
           MALS++GVHDVTGVELIDSPPLVSR DPHNLPFFDHVFDLAFTAHLAEALFPS
Sbjct: 114 MALSQMGVHDVTGVELIDSPPLVSRADPHNLPFFDHVFDLAFTAHLAEALFPS 166

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BLAST of MELO3C019005 vs. TrEMBL
Match: E5GC82_CUCME (Methyltransferase OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 1.2e-20
Identity = 50/53 (94.34%), Postives = 51/53 (96.23%), Query Frame = 1


Query: 1  MALSRIGVHDVTGVELIDSPPLVSRVDPHNLPFFDHVFDLAFTAHLAEALFPS 54
          MALS +GVHDVTGVELIDSPPLVSR DPHNLPFFDHVFDLAFTAHLAEALFPS
Sbjct: 1  MALSHMGVHDVTGVELIDSPPLVSRADPHNLPFFDHVFDLAFTAHLAEALFPS 53

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BLAST of MELO3C019005 vs. TrEMBL
Match: A0A059DGX2_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A01742 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 1.8e-16
Identity = 45/53 (84.91%), Postives = 46/53 (86.79%), Query Frame = 1


Query: 1   MALSRIGVHDVTGVELIDSPPLVSRVDPHNLPFFDHVFDLAFTAHLAEALFPS 54
           MALS  GV DVTGVELIDSPPLVSR DPHNLPFFD VFDLAF+ HL EALFPS
Sbjct: 114 MALSESGVADVTGVELIDSPPLVSRADPHNLPFFDGVFDLAFSGHLEEALFPS 166

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BLAST of MELO3C019005 vs. TrEMBL
Match: W9RLJ6_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_008732 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 8.8e-16
Identity = 41/53 (77.36%), Postives = 48/53 (90.57%), Query Frame = 1


Query: 1   MALSRIGVHDVTGVELIDSPPLVSRVDPHNLPFFDHVFDLAFTAHLAEALFPS 54
           MAL+++GV DVT VE+++SPPLV R DPHNLPFFD VFDLAF+AHLAEALFPS
Sbjct: 108 MALAQMGVADVTAVEVVESPPLVDRADPHNLPFFDEVFDLAFSAHLAEALFPS 160

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BLAST of MELO3C019005 vs. TrEMBL
Match: A0A067E1N5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g027039mg PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 1.1e-15
Identity = 43/53 (81.13%), Postives = 46/53 (86.79%), Query Frame = 1


Query: 1   MALSRIGVHDVTGVELIDSPPLVSRVDPHNLPFFDHVFDLAFTAHLAEALFPS 54
           MA + IGV DVTGVEL+DS PLVSR DPHNLPFFD  FD+AFTAHLAEALFPS
Sbjct: 112 MAFNSIGVADVTGVELMDSLPLVSRADPHNLPFFDEAFDVAFTAHLAEALFPS 164

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BLAST of MELO3C019005 vs. TAIR10
Match: AT2G16030.1 (AT2G16030.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein)

HSP 1 Score: 88.2 bits (217), Expect = 1.7e-18
Identity = 42/52 (80.77%), Postives = 43/52 (82.69%), Query Frame = 1


Query: 1   MALSRIGVHDVTGVELIDSPPLVSRVDPHNLPFFDHVFDLAFTAHLAEALFP 53
           MALS+IG+ DVT VEL+DS PLV R DPHNLPFFD VFD AFTAHLAEALFP
Sbjct: 114 MALSQIGLSDVTAVELVDSIPLVKRADPHNLPFFDGVFDFAFTAHLAEALFP 165

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BLAST of MELO3C019005 vs. TAIR10
Match: AT4G26730.1 (AT4G26730.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein)

HSP 1 Score: 87.4 bits (215), Expect = 2.9e-18
Identity = 41/52 (78.85%), Postives = 42/52 (80.77%), Query Frame = 1


Query: 1   MALSRIGVHDVTGVELIDSPPLVSRVDPHNLPFFDHVFDLAFTAHLAEALFP 53
           MALS+IG+ DVT VEL+DS PLV R DPHNLPFFD VFD  FTAHLAEALFP
Sbjct: 79  MALSQIGLSDVTAVELVDSIPLVKRADPHNLPFFDRVFDFVFTAHLAEALFP 130

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BLAST of MELO3C019005 vs. TAIR10
Match: AT1G24480.1 (AT1G24480.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein)

HSP 1 Score: 49.7 bits (117), Expect = 6.7e-07
Identity = 23/51 (45.10%), Postives = 30/51 (58.82%), Query Frame = 1


Query: 2   ALSRIGVHDVTGVELIDSPPLVSRVDPHNLPFFDHVFDLAFTAHLAEALFP 53
           AL R+GV+D  G++L+  PPLV + D H+ PF D  FD  F+     AL+P
Sbjct: 110 ALKRVGVNDSVGMDLVPYPPLVVKGDFHHQPFDDETFDFEFSNVFDHALYP 160

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BLAST of MELO3C019005 vs. NCBI nr
Match: gi|449453660|ref|XP_004144574.1| (PREDICTED: uncharacterized protein LOC101220368 [Cucumis sativus])

HSP 1 Score: 106.7 bits (265), Expect = 1.3e-20
Identity = 50/53 (94.34%), Postives = 52/53 (98.11%), Query Frame = 1


Query: 1   MALSRIGVHDVTGVELIDSPPLVSRVDPHNLPFFDHVFDLAFTAHLAEALFPS 54
           MALS++GVHDVTGVELIDSPPLVSR DPHNLPFFDHVFDLAFTAHLAEALFPS
Sbjct: 114 MALSQMGVHDVTGVELIDSPPLVSRADPHNLPFFDHVFDLAFTAHLAEALFPS 166

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BLAST of MELO3C019005 vs. NCBI nr
Match: gi|307136248|gb|ADN34081.1| (methyltransferase [Cucumis melo subsp. melo])

HSP 1 Score: 106.3 bits (264), Expect = 1.7e-20
Identity = 50/53 (94.34%), Postives = 51/53 (96.23%), Query Frame = 1


Query: 1  MALSRIGVHDVTGVELIDSPPLVSRVDPHNLPFFDHVFDLAFTAHLAEALFPS 54
          MALS +GVHDVTGVELIDSPPLVSR DPHNLPFFDHVFDLAFTAHLAEALFPS
Sbjct: 1  MALSHMGVHDVTGVELIDSPPLVSRADPHNLPFFDHVFDLAFTAHLAEALFPS 53

[Close]

BLAST of MELO3C019005 vs. NCBI nr
Match: gi|659133738|ref|XP_008466880.1| (PREDICTED: uncharacterized protein LOC103504200, partial [Cucumis melo])

HSP 1 Score: 106.3 bits (264), Expect = 1.7e-20
Identity = 50/53 (94.34%), Postives = 51/53 (96.23%), Query Frame = 1


Query: 1   MALSRIGVHDVTGVELIDSPPLVSRVDPHNLPFFDHVFDLAFTAHLAEALFPS 54
           MALS +GVHDVTGVELIDSPPLVSR DPHNLPFFDHVFDLAFTAHLAEALFPS
Sbjct: 66  MALSHMGVHDVTGVELIDSPPLVSRADPHNLPFFDHVFDLAFTAHLAEALFPS 118

[Close]

BLAST of MELO3C019005 vs. NCBI nr
Match: gi|659072244|ref|XP_008464338.1| (PREDICTED: uncharacterized protein LOC103502244 [Cucumis melo])

HSP 1 Score: 104.8 bits (260), Expect = 5.0e-20
Identity = 49/53 (92.45%), Postives = 50/53 (94.34%), Query Frame = 1


Query: 1   MALSRIGVHDVTGVELIDSPPLVSRVDPHNLPFFDHVFDLAFTAHLAEALFPS 54
           MALS +GVHDVTGVELIDSPP VSR DPHNLPFFDHVFDLAFTAHLAEALFPS
Sbjct: 114 MALSHMGVHDVTGVELIDSPPFVSRADPHNLPFFDHVFDLAFTAHLAEALFPS 166

[Close]

BLAST of MELO3C019005 vs. NCBI nr
Match: gi|659133779|ref|XP_008466896.1| (PREDICTED: uncharacterized protein LOC103504231, partial [Cucumis melo])

HSP 1 Score: 104.8 bits (260), Expect = 5.0e-20
Identity = 50/53 (94.34%), Postives = 51/53 (96.23%), Query Frame = 1


Query: 1   MALSRIGVHDVTGVELIDSPPLVSRVDPHNLPFFDHVFDLAFTAHLAEALFPS 54
           MALS +GVHDVTGVELIDSPPLVS VDPHNLPFFDHVFDLAFTAHLAEALFPS
Sbjct: 91  MALSHMGVHDVTGVELIDSPPLVSCVDPHNLPFFDHVFDLAFTAHLAEALFPS 143

The following BLAST results are available for this feature:

BLAST of MELO3C019005 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K6X5_CUCSA	9.1e-21	94.34	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G045500 PE=4 SV=1	[more]
E5GC82_CUCME	1.2e-20	94.34	Methyltransferase OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
A0A059DGX2_EUCGR	1.8e-16	84.91	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A01742 PE=4 SV=1	[more]
W9RLJ6_9ROSA	8.8e-16	77.36	Uncharacterized protein OS=Morus notabilis GN=L484_008732 PE=4 SV=1	[more]
A0A067E1N5_CITSI	1.1e-15	81.13	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g027039mg PE=4 SV=1	[more]

BLAST of MELO3C019005 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G16030.1	1.7e-18	80.77	S-adenosyl-L-methionine-dependent methyltransferases superfamily pro...	[more]
AT4G26730.1	2.9e-18	78.85	S-adenosyl-L-methionine-dependent methyltransferases superfamily pro...	[more]
AT1G24480.1	6.7e-07	45.10	S-adenosyl-L-methionine-dependent methyltransferases superfamily pro...	[more]

BLAST of MELO3C019005 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449453660\|ref\|XP_004144574.1\|	1.3e-20	94.34	PREDICTED: uncharacterized protein LOC101220368 [Cucumis sativus]	[more]
gi\|307136248\|gb\|ADN34081.1\|	1.7e-20	94.34	methyltransferase [Cucumis melo subsp. melo]	[more]
gi\|659133738\|ref\|XP_008466880.1\|	1.7e-20	94.34	PREDICTED: uncharacterized protein LOC103504200, partial [Cucumis melo]	[more]
gi\|659072244\|ref\|XP_008464338.1\|	5.0e-20	92.45	PREDICTED: uncharacterized protein LOC103502244 [Cucumis melo]	[more]
gi\|659133779\|ref\|XP_008466896.1\|	5.0e-20	94.34	PREDICTED: uncharacterized protein LOC103504231, partial [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032259	methylation
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008168	methyltransferase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C019005T1	MELO3C019005T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR10108	METHYLTRANSFERASE	coord: 1..52 score: 2.7
None	No IPR available	PANTHER	PTHR10108:SF914	SUBFAMILY NOT NAMED	coord: 1..52 score: 2.7

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C019005	Silver-seed gourd	carmeB0925
MELO3C019005	Silver-seed gourd	carmeB0993
MELO3C019005	Cucumber (Chinese Long) v3	cucmeB304
MELO3C019005	Watermelon (97103) v2	mewmbB461
MELO3C019005	Watermelon (97103) v2	mewmbB466
MELO3C019005	Cucurbita maxima (Rimu)	cmameB302
MELO3C019005	Cucurbita maxima (Rimu)	cmameB698
MELO3C019005	Cucurbita moschata (Rifu)	cmomeB297
MELO3C019005	Cucurbita moschata (Rifu)	cmomeB690
MELO3C019005	Wild cucumber (PI 183967)	cpimeB298
MELO3C019005	Cucumber (Chinese Long) v2	cumeB303
MELO3C019005	Watermelon (Charleston Gray)	mewcgB456
MELO3C019005	Watermelon (97103) v1	mewmB494
MELO3C019005	Cucurbita pepo (Zucchini)	cpemeB199
MELO3C019005	Cucurbita pepo (Zucchini)	cpemeB205
MELO3C019005	Cucurbita pepo (Zucchini)	cpemeB421
MELO3C019005	Cucumber (Gy14) v2	cgybmeB259