MELO3C018985.2 (gene) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAAAAACCCTAAATCCTAACACCTCTTCGCTCAATATATATTCCGATTCAGAGCAGTGGCGATCACCGTAAGCGCATTTTGCCTCCCAATCGTCTCCTAGTATGTTCCTCATCTGAGATCTTCATTATTCAATCTTGCTTCTCTTTCTCCATCGTTTTCTAATGCTTTTCGAGTTCTGATTGTTTAATTCGCATATCAGGCCATCTATTAGCCATGTCTACCAGTGAACTCGCCTGCGCCTACGCCGCCCTGGCTCTTCACGACGATGGAATCGCAATCACTGTACCAATCATTATCTTTCCTTGTATATATCATTTTTCCTTCTTTGGATTGTTTGATGCGTGATTAATTTGCCTATTGGGTTTAGGCGGAAAAGATTGCAGCCGTTGTAGCAGCTGCGGGGCTCTGTGTAGAATCTTACTGGCCTAGCTTGTTTGCTAAATTGGCGGAGAAGAGGAACATTGGGGATCTTCTTCTTAATGTTGGATGTGGAGGTGGCGCTGCGGCTCCCGTGGCTGTAGCTGCTCCTACCGCTAGTGCTGCTGCCGCTTCTGCCATCGAGGAAAAGAAGGTATGGTGATGAATGTTTAACTGTTCTTGTAGTGAATCTTTCTGTAGATGCCCTCCTCATTTTAACAAACTCCTTTACTTCTCTGTACCTGCTAGCTCTAAATTTCCATTTACGCGCGATTTTGAATAAGGATCTCTTTCGTATATATCCATATAACACACGTCCTAATACTATTAGTTACTGCTGAATTAGTTAAGTATGAAAAAAAATGAACTCTTTAACTGTTGCCAATATAGAAAATTTTTTTTTTTTTTTTTGTAATCAACCCGTTAGGTAGTTCTTAATATTCCTTTGAACTTTTGAAGTTTAGGTTTTCATGTATCCAAGAGAGAGATTCAATAGAAAATTGAATATTGATGAGGGTAGTTTGTACTTTTAGAAATTTTAACTGCCACCTTCATTGATTGAAATATTAGTGAATTAGATCTTTATCGTTGCTATTTAGTTTCATTCGCCTCCTTTTTCCCTTTTCTTCGATTTGTTCATTTAAGTCAACTATGCAGGAGGAGCCAAAGGAGGAGAGCGACGATGACATGGGATTCAGCTTATTCGATTAAGAGGCTTTCTTTAGTTTTGTAGGATTTTATTAGGAAACTATTGGGTGGGTAGCTTAATCTTGATTTTCCGCTGTTGGTCTCAAGATTTGTTTTTTTTACTAGGCCGTTTTGAGTTTTGATTTGCCTTCAATGTACGATGGTAACTGCATCTTTTCACTCCTTTTTCTTAACTACACATTGGAATGAGATCAAACTTTATGAGAGGAATTCTTTGGTTAAACCCTGGAACCACGTTTTCTTGGTTTATGATTTCTAGGTTTAGTTAATAAGCACTTTTGAAATTACATTATATTTCGTTTCAAACATTCTTTTCAGTAAATTCTTTTTGAAAATGATATTAATGAAAACTCATCTATATCAATGATTTTTTTGAATTATTTCTAGTTGATAGCATTTGCTCTCTTCTTTTATTTATTGAAGTTGTAACAATAATATTGGGCTTTAAACAAT GAAAAACCCTAAATCCTAACACCTCTTCGCTCAATATATATTCCGATTCAGAGCAGTGGCGATCACCGTAAGCGCATTTTGCCTCCCAATCGTCTCCTAGTATGTTCCTCATCTGAGATCTTCATTATTCAATCTTGCTTCTCTTTCTCCATCGTTTTCTAATGCTTTTCGAGTTCTGATTGTTTAATTCGCATATCAGGCCATCTATTAGCCATGTCTACCAGTGAACTCGCCTGCGCCTACGCCGCCCTGGCTCTTCACGACGATGGAATCGCAATCACTGCGGAAAAGATTGCAGCCGTTGTAGCAGCTGCGGGGCTCTGTGTAGAATCTTACTGGCCTAGCTTGTTTGCTAAATTGGCGGAGAAGAGGAACATTGGGGATCTTCTTCTTAATGTTGGATGTGGAGGTGGCGCTGCGGCTCCCGTGGCTGTAGCTGCTCCTACCGCTAGTGCTGCTGCCGCTTCTGCCATCGAGGAAAAGAAGGAGGAGCCAAAGGAGGAGAGCGACGATGACATGGGATTCAGCTTATTCGATTAAGAGGCTTTCTTTAGTTTTGTAGGATTTTATTAGGAAACTATTGGGTGGGTAGCTTAATCTTGATTTTCCGCTGTTGGTCTCAAGATTTGTTTTTTTTACTAGGCCGTTTTGAGTTTTGATTTGCCTTCAATGTACGATGGTAACTGCATCTTTTCACTCCTTTTTCTTAACTACACATTGGAATGAGATCAAACTTTATGAGAGGAATTCTTTGGTTAAACCCTGGAACCACGTTTTCTTGGTTTATGATTTCTAGGTTTAGTTAATAAGCACTTTTGAAATTACATTATATTTCGTTTCAAACATTCTTTTCAGTAAATTCTTTTTGAAAATGATATTAATGAAAACTCATCTATATCAATGATTTTTTTGAATTATTTCTAGTTGATAGCATTTGCTCTCTTCTTTTATTTATTGAAGTTGTAACAATAATATTGGGCTTTAAACAAT ATGTCTACCAGTGAACTCGCCTGCGCCTACGCCGCCCTGGCTCTTCACGACGATGGAATCGCAATCACTGCGGAAAAGATTGCAGCCGTTGTAGCAGCTGCGGGGCTCTGTGTAGAATCTTACTGGCCTAGCTTGTTTGCTAAATTGGCGGAGAAGAGGAACATTGGGGATCTTCTTCTTAATGTTGGATGTGGAGGTGGCGCTGCGGCTCCCGTGGCTGTAGCTGCTCCTACCGCTAGTGCTGCTGCCGCTTCTGCCATCGAGGAAAAGAAGGAGGAGCCAAAGGAGGAGAGCGACGATGACATGGGATTCAGCTTATTCGATTAA MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVAVAAPTASAAAASAIEEKKEEPKEESDDDMGFSLFD
BLAST of MELO3C018985.2 vs. NCBI nr
Match: XP_004138012.2 (PREDICTED: 60S acidic ribosomal protein P1 [Cucumis sativus] >KGN63426.1 hypothetical protein Csa_1G000010 [Cucumis sativus]) HSP 1 Score: 128.6 bits (322), Expect = 1.2e-26 Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0
BLAST of MELO3C018985.2 vs. NCBI nr
Match: XP_008455614.1 (PREDICTED: 60S acidic ribosomal protein P1-like isoform X1 [Cucumis melo]) HSP 1 Score: 128.6 bits (322), Expect = 1.2e-26 Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0
BLAST of MELO3C018985.2 vs. NCBI nr
Match: XP_016901771.1 (PREDICTED: 60S acidic ribosomal protein P1-like isoform X2 [Cucumis melo]) HSP 1 Score: 128.6 bits (322), Expect = 1.2e-26 Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0
BLAST of MELO3C018985.2 vs. NCBI nr
Match: XP_022140845.1 (60S acidic ribosomal protein P1-like [Momordica charantia]) HSP 1 Score: 125.6 bits (314), Expect = 1.1e-25 Identity = 63/65 (96.92%), Postives = 65/65 (100.00%), Query Frame = 0
BLAST of MELO3C018985.2 vs. NCBI nr
Match: XP_022945965.1 (60S acidic ribosomal protein P1-like [Cucurbita moschata] >XP_023541270.1 60S acidic ribosomal protein P1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 125.6 bits (314), Expect = 1.1e-25 Identity = 63/65 (96.92%), Postives = 65/65 (100.00%), Query Frame = 0
BLAST of MELO3C018985.2 vs. TAIR10
Match: AT5G24510.1 (60S acidic ribosomal protein family) HSP 1 Score: 95.1 bits (235), Expect = 2.8e-20 Identity = 47/65 (72.31%), Postives = 53/65 (81.54%), Query Frame = 0
BLAST of MELO3C018985.2 vs. TAIR10
Match: AT1G01100.1 (60S acidic ribosomal protein family) HSP 1 Score: 87.8 bits (216), Expect = 4.4e-18 Identity = 43/64 (67.19%), Postives = 54/64 (84.38%), Query Frame = 0
BLAST of MELO3C018985.2 vs. TAIR10
Match: AT5G47700.1 (60S acidic ribosomal protein family) HSP 1 Score: 87.8 bits (216), Expect = 4.4e-18 Identity = 43/64 (67.19%), Postives = 54/64 (84.38%), Query Frame = 0
BLAST of MELO3C018985.2 vs. TAIR10
Match: AT4G00810.1 (60S acidic ribosomal protein family) HSP 1 Score: 85.5 bits (210), Expect = 2.2e-17 Identity = 42/64 (65.62%), Postives = 54/64 (84.38%), Query Frame = 0
BLAST of MELO3C018985.2 vs. Swiss-Prot
Match: sp|P52855|RLA1_MAIZE (60S acidic ribosomal protein P1 OS=Zea mays OX=4577 GN=RPP1A PE=1 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 1.2e-17 Identity = 45/63 (71.43%), Postives = 53/63 (84.13%), Query Frame = 0
BLAST of MELO3C018985.2 vs. Swiss-Prot
Match: sp|Q8LCW9|RLA11_ARATH (60S acidic ribosomal protein P1-1 OS=Arabidopsis thaliana OX=3702 GN=RPP1A PE=3 SV=2) HSP 1 Score: 87.8 bits (216), Expect = 8.0e-17 Identity = 43/64 (67.19%), Postives = 54/64 (84.38%), Query Frame = 0
BLAST of MELO3C018985.2 vs. Swiss-Prot
Match: sp|Q8LEQ0|RLA13_ARATH (60S acidic ribosomal protein P1-3 OS=Arabidopsis thaliana OX=3702 GN=RPP1C PE=1 SV=2) HSP 1 Score: 87.8 bits (216), Expect = 8.0e-17 Identity = 43/64 (67.19%), Postives = 54/64 (84.38%), Query Frame = 0
BLAST of MELO3C018985.2 vs. Swiss-Prot
Match: sp|O23095|RLA12_ARATH (60S acidic ribosomal protein P1-2 OS=Arabidopsis thaliana OX=3702 GN=RPP1B PE=1 SV=2) HSP 1 Score: 85.5 bits (210), Expect = 4.0e-16 Identity = 42/64 (65.62%), Postives = 54/64 (84.38%), Query Frame = 0
BLAST of MELO3C018985.2 vs. Swiss-Prot
Match: sp|P29763|RLA1_CHLRE (60S acidic ribosomal protein P1 OS=Chlamydomonas reinhardtii OX=3055 PE=3 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 3.3e-15 Identity = 40/63 (63.49%), Postives = 49/63 (77.78%), Query Frame = 0
BLAST of MELO3C018985.2 vs. TrEMBL
Match: tr|A0A1S4E0L6|A0A1S4E0L6_CUCME (60S acidic ribosomal protein P1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495745 PE=4 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 8.2e-27 Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0
BLAST of MELO3C018985.2 vs. TrEMBL
Match: tr|A0A1S3C0X1|A0A1S3C0X1_CUCME (60S acidic ribosomal protein P1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495745 PE=3 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 8.2e-27 Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0
BLAST of MELO3C018985.2 vs. TrEMBL
Match: tr|A0A0A0LTV1|A0A0A0LTV1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G000010 PE=3 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 8.2e-27 Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0
BLAST of MELO3C018985.2 vs. TrEMBL
Match: tr|A0A2N9IW14|A0A2N9IW14_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS56215 PE=3 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 3.7e-19 Identity = 51/63 (80.95%), Postives = 57/63 (90.48%), Query Frame = 0
BLAST of MELO3C018985.2 vs. TrEMBL
Match: tr|A0A2P4M418|A0A2P4M418_QUESU (60s acidic ribosomal protein p1-2 OS=Quercus suber OX=58331 GN=CFP56_41587 PE=3 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 1.8e-18 Identity = 50/65 (76.92%), Postives = 56/65 (86.15%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |