MELO3C018954.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C018954.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
Description50S ribosomal protein L29, chloroplastic
Locationchr07 : 14547242 .. 14549591 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAATATAATATATGTGGATAGCGGATGTACTATGGGCATTTGCGTAAATAGGGGTAAGAGGGGTAATAGGGGATCTCGAAAAGTAACAATAGAAGTGCTGGGAGCTTATCTCATTCTTTAGTAGCAGAGCGCTCTTACAAACTTTGAAGATGATAAACCTTTCAGTTGCTTCTTTACCTTCGGCCCTTCCAATCCCTTCAAAATTTCTTAATTCGACTTCCAAATCCTTCTTCAATGGCCTTCAAATCCGTTTCCCATTTTCGTTTTGCGTTCCTCCTAAAACTGCAACTACTGGAGGAGGCCGCAATTCATCGGTGGTAATGATGGCCAAGAGGGAGGAGGAATTGAAGGATATAAGGGCCAAAACTACTGAGGAAATAAACGAAGAGGTCGTCGATCTTAAGGGTGAACTTCTTATGCTTCGTCTTCAAAAATCAGCCCGCAATGAGTTTAAGTCTAGCGAATTCCGCCGCATGCGCAAACGGGTACTTTTTTCCCCTTGTTGATGGATTGATTCTTAATTAATTTTGAGTTCAATAGCCGTTTGTGGGAATGATTCTAGAAACATGTATGTTTGTGGGAATCAACTTAGGATGCAGATTTGAGTTCACAGCCGAAAGAAATTTACCAAAACAATATTTCACCATGTTGGGAAATTTTTACAAAAGTTGCATTTTAGATTCATTTAGAATGTGCTCTGGAACGTAGAGGTCCAGTTAGAATCAGAAAATGTAAACTGAAACTGGGATTTCTAACGTTAACGTCATATTCTACTAAGATAAACTCTAAATAGCTCCCTCATAGATTTTACATTTTTGATAAAATCGGCACCATCTTCGAGAAACCCCTCGTATGTCTTCATGTTAACATTTTGTATAAGATTCCCAAAATGCCTGAAGCTTGAATGAGTCTATAGATGTGGAAAGCATTTGGGTTTAGAACGACTTGTCTTCTTATATGAAGTTGGTTAATGTAAATAACCTAATTCTATTCTGATCATGGAAGCTCACAATTTAGTGCATAAAAGAGAGAGTTTGCCATTTGACCATATGTAGCCTTCTCCTGACTTTTACACCAAAACTTCATCATGCTTGGTGCTTAGTCTGGATATTGAAATTATCCGATGGGCTTCTCTATGTTCCACTAAACCAAAGCCCTCAACGATTAGAAATTGTTGAATAGCAAATAATTTATTTACACATTATGAATTTAGTAAGGCTCGCAGATTTTTTTAATTCCCTTATGATCATGAATTGCTGGAGAGATGGTTAACACTGTAATAGTGGTAAGACTTGCCATTTCTCATAGTTTATGGTTTCAAGTCAAGTATGAGATTTAGGTAGCAAACTTTTTGCATCTGTAGTAATCGCATGGCTTCATGATAAGATCTTGAGTTGTTTGTAGTGACCCTCTAAAGTATTGTTTCAAAGCCTCTAACTGGGTAACTTAGTACTCCAAGGCCAGCTTTATGAAAGATTATTCAATGAGACCGCCACAATGTGTTGTCTCGTAATAACCGTTCAATGAGGATCTAATAATTGGTCGATCCCCTAATAACCACTTTATATAAATTTGAACTATTTCTCTCTGCATCTAAGGGTGAAAACTACCACCTACATCGTGATGGTCTAACTGAATAATTTCTCCGATATTGAACTAGGTGAAGCCTTCTTAGAGATTAGTGGTGAGTTCATGAACATAGGAATTGGCCTTGACAATCCTAGTCGTCAGTTAACCTGACTGATATATATGCAGTGGTATGATAATGTGGGACAATTAGGAAGTTTGTATTATATATTGCTTGTCTTCTCTCTTTATTGTATTTATTTATCTTCACATACCTTCAGATTGCAACATCGTAGCCAATACATCCAATGTTTGGTCTTGCCTAACAAGTTTCCTTTCGACACTATTTTTGAACCATTTATTGTTGTTTGTCCGGTGATAGATTTCTCGGATGCTAACAGTAAAACGTGAGAGAGAGATTGAAGAGGGTGTGGGCAAAAGGATGTCAAGAAAGTTAGATAGAAAGTGGAAGAAAAGTATTGTTGTCAGACCACCTCCATCTCTGAAGAAGTTGCGAGAGGAAGAAGCAGCAGCTGAAGAAGCTGAGAAATCTGCTTGAACGAATCAGATACATGCTCGCATTCAATCTTTATGAGTTTGAAGTTGTTGAGATTTGAGAACGCTGTTTAAGCAACACTTTAGAAAAAAAAAATTCCAACTTTAAACATTCTGATTCTTGTACTTAGCTTATGCACAAATGGAAATAGATTTCGAGTGGATCATGTTGAATTTATATGCTTTCACTCCTTAATTTAAATTAGATAAAAGGTATGTTTGGGAATG

mRNA sequence

AAAATATAATATATGTGGATAGCGGATGTACTATGGGCATTTGCGTAAATAGGGGTAAGAGGGGTAATAGGGGATCTCGAAAAGTAACAATAGAAGTGCTGGGAGCTTATCTCATTCTTTAGTAGCAGAGCGCTCTTACAAACTTTGAAGATGATAAACCTTTCAGTTGCTTCTTTACCTTCGGCCCTTCCAATCCCTTCAAAATTTCTTAATTCGACTTCCAAATCCTTCTTCAATGGCCTTCAAATCCGTTTCCCATTTTCGTTTTGCGTTCCTCCTAAAACTGCAACTACTGGAGGAGGCCGCAATTCATCGGTGGTAATGATGGCCAAGAGGGAGGAGGAATTGAAGGATATAAGGGCCAAAACTACTGAGGAAATAAACGAAGAGGTCGTCGATCTTAAGGGTGAACTTCTTATGCTTCGTCTTCAAAAATCAGCCCGCAATGAGTTTAAGTCTAGCGAATTCCGCCGCATGCGCAAACGGATTTCTCGGATGCTAACAGTAAAACGTGAGAGAGAGATTGAAGAGGGTGTGGGCAAAAGGATGTCAAGAAAGTTAGATAGAAAGTGGAAGAAAAGTATTGTTGTCAGACCACCTCCATCTCTGAAGAAGTTGCGAGAGGAAGAAGCAGCAGCTGAAGAAGCTGAGAAATCTGCTTGAACGAATCAGATACATGCTCGCATTCAATCTTTATGAGTTTGAAGTTGTTGAGATTTGAGAACGCTGTTTAAGCAACACTTTAGAAAAAAAAAATTCCAACTTTAAACATTCTGATTCTTGTACTTAGCTTATGCACAAATGGAAATAGATTTCGAGTGGATCATGTTGAATTTATATGCTTTCACTCCTTAATTTAAATTAGATAAAAGGTATGTTTGGGAATG

Coding sequence (CDS)

ATGATAAACCTTTCAGTTGCTTCTTTACCTTCGGCCCTTCCAATCCCTTCAAAATTTCTTAATTCGACTTCCAAATCCTTCTTCAATGGCCTTCAAATCCGTTTCCCATTTTCGTTTTGCGTTCCTCCTAAAACTGCAACTACTGGAGGAGGCCGCAATTCATCGGTGGTAATGATGGCCAAGAGGGAGGAGGAATTGAAGGATATAAGGGCCAAAACTACTGAGGAAATAAACGAAGAGGTCGTCGATCTTAAGGGTGAACTTCTTATGCTTCGTCTTCAAAAATCAGCCCGCAATGAGTTTAAGTCTAGCGAATTCCGCCGCATGCGCAAACGGATTTCTCGGATGCTAACAGTAAAACGTGAGAGAGAGATTGAAGAGGGTGTGGGCAAAAGGATGTCAAGAAAGTTAGATAGAAAGTGGAAGAAAAGTATTGTTGTCAGACCACCTCCATCTCTGAAGAAGTTGCGAGAGGAAGAAGCAGCAGCTGAAGAAGCTGAGAAATCTGCTTGA

Protein sequence

MINLSVASLPSALPIPSKFLNSTSKSFFNGLQIRFPFSFCVPPKTATTGGGRNSSVVMMAKREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFKSSEFRRMRKRISRMLTVKREREIEEGVGKRMSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA
Homology
[Close]
BLAST of MELO3C018954.2 vs. NCBI nr
Match: XP_008455595.1 (PREDICTED: 50S ribosomal protein L29, chloroplastic [Cucumis melo])

HSP 1 Score: 219.9 bits (559), Expect = 6.5e-54
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0 

Query: 1   MINLSVASLPSALPIPSKFLNSTSKSFFNGLQIRFPFSFCVPXXXXXXXXXXXXXXXXXX 60
           MINLSVASLPSALPIPSKFLNSTSKSFFNGLQIRFPFSFCVPXXXXXXXXXXXXXXXXXX
Sbjct: 1   MINLSVASLPSALPIPSKFLNSTSKSFFNGLQIRFPFSFCVPXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXLKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFKSSEFRRMRKRISRMLTVK 120
           XXXXXLKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFKSSEFRRMRKRISRMLTVK
Sbjct: 61  XXXXXLKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFKSSEFRRMRKRISRMLTVK 120

Query: 121 REREIEEGVGKRMSRKLDRKWKKSIXXXXXXXXXXXXXXXXXXXXAEKSA 171
           REREIEEGVGKRMSRKLDRKWKKSIXXXXXXXXXXXXXXXXXXXXAEKSA
Sbjct: 121 REREIEEGVGKRMSRKLDRKWKKSIXXXXXXXXXXXXXXXXXXXXAEKSA 170

[Close]
BLAST of MELO3C018954.2 vs. NCBI nr
Match: XP_004137190.1 (PREDICTED: 50S ribosomal protein L29, chloroplastic [Cucumis sativus] >KGN53650.1 hypothetical protein Csa_4G095600 [Cucumis sativus])

HSP 1 Score: 203.0 bits (515), Expect = 8.2e-49
Identity = 137/170 (80.59%), Postives = 143/170 (84.12%), Query Frame = 0 

Query: 1   MINLSVASLPSALPIPSKFLNSTSKSFFNGLQIRFPFSFCVPXXXXXXXXXXXXXXXXXX 60
           MINLS+ASLPS LPIPSKFLNSTSKS FN LQIRFPFSF +P                  
Sbjct: 1   MINLSIASLPSTLPIPSKFLNSTSKSSFNALQIRFPFSFRLPPKTATTGRGRNSSVVMMA 60

Query: 61  XXXXXLKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFKSSEFRRMRKRISRMLTVK 120
                LKDIR+KTTEEINEEV+DLKGELLMLRLQKSARNEFKSSEFRRMRKRISRMLTV+
Sbjct: 61  KREDELKDIRSKTTEEINEEVIDLKGELLMLRLQKSARNEFKSSEFRRMRKRISRMLTVR 120

Query: 121 REREIEEGVGKRMSRKLDRKWKKSIXXXXXXXXXXXXXXXXXXXXAEKSA 171
           REREIEEGVGKR+SRKLDRKWKKSIXXXXXXXXXXXXXXXXXXXXAEKSA
Sbjct: 121 REREIEEGVGKRLSRKLDRKWKKSIXXXXXXXXXXXXXXXXXXXXAEKSA 170

[Close]
BLAST of MELO3C018954.2 vs. NCBI nr
Match: XP_022985118.1 (50S ribosomal protein L29, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 189.5 bits (480), Expect = 9.4e-45
Identity = 111/145 (76.55%), Postives = 118/145 (81.38%), Query Frame = 0 

Query: 1   MINLSVASLPSALPIPSKFLNSTSKSFFNGLQIRFPFSFCVPXXXXXXXXXXXXXXXXXX 60
           MINLS+AS PS++ IP+KFL+STSKS FNGLQIRFPFSF VP                  
Sbjct: 1   MINLSIAS-PSSVAIPAKFLSSTSKSSFNGLQIRFPFSFRVP-PKAACIGGRNSPVVMMA 60

Query: 61  XXXXXLKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFKSSEFRRMRKRISRMLTVK 120
                LKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFKSSEFRRMRKRI+RMLTVK
Sbjct: 61  KREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFKSSEFRRMRKRIARMLTVK 120

Query: 121 REREIEEGVGKRMSRKLDRKWKKSI 146
           REREIEEGVGKR+SRKLDRKWKKSI
Sbjct: 121 REREIEEGVGKRLSRKLDRKWKKSI 143

[Close]
BLAST of MELO3C018954.2 vs. NCBI nr
Match: XP_023551880.1 (50S ribosomal protein L29, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 186.4 bits (472), Expect = 7.9e-44
Identity = 128/170 (75.29%), Postives = 138/170 (81.18%), Query Frame = 0 

Query: 1   MINLSVASLPSALPIPSKFLNSTSKSFFNGLQIRFPFSFCVPXXXXXXXXXXXXXXXXXX 60
           M+NLS+AS PS++ IP+KFL+STSKS F+GLQIRFPFSF VP                  
Sbjct: 1   MMNLSIAS-PSSVAIPAKFLSSTSKSSFHGLQIRFPFSFRVP-PKAACTGGRISPVVMMA 60

Query: 61  XXXXXLKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFKSSEFRRMRKRISRMLTVK 120
                LKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFKSSEFRRMRKRI+RMLTVK
Sbjct: 61  KREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFKSSEFRRMRKRIARMLTVK 120

Query: 121 REREIEEGVGKRMSRKLDRKWKKSIXXXXXXXXXXXXXXXXXXXXAEKSA 171
           REREIEEGVGKR+SRKLDRKWK+SI    XXXXXXXXXXXXXXX AEKSA
Sbjct: 121 REREIEEGVGKRLSRKLDRKWKRSIVVRPXXXXXXXXXXXXXXXAAEKSA 168

[Close]
BLAST of MELO3C018954.2 vs. NCBI nr
Match: XP_022929361.1 (50S ribosomal protein L29, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 185.3 bits (469), Expect = 1.8e-43
Identity = 109/145 (75.17%), Postives = 117/145 (80.69%), Query Frame = 0 

Query: 1   MINLSVASLPSALPIPSKFLNSTSKSFFNGLQIRFPFSFCVPXXXXXXXXXXXXXXXXXX 60
           M+NLS+AS PS++ IP+KFL+STSKS FNGLQIRFPFS  VP                  
Sbjct: 1   MMNLSIAS-PSSVAIPAKFLSSTSKSSFNGLQIRFPFSCRVP-PKAACTGGRNSPVVMMA 60

Query: 61  XXXXXLKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFKSSEFRRMRKRISRMLTVK 120
                LKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFKSSEFRRMRKRI+RMLTVK
Sbjct: 61  KREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFKSSEFRRMRKRIARMLTVK 120

Query: 121 REREIEEGVGKRMSRKLDRKWKKSI 146
           REREIEEGVGKR+SRKLDRKWKKSI
Sbjct: 121 REREIEEGVGKRLSRKLDRKWKKSI 143

[Close]
BLAST of MELO3C018954.2 vs. TAIR10
Match: AT5G65220.1 (Ribosomal L29 family protein )

HSP 1 Score: 130.2 bits (326), Expect = 1.2e-30
Identity = 78/146 (53.42%), Postives = 102/146 (69.86%), Query Frame = 0 

Query: 1   MINLSVASLPSALPIPSKFLNSTS-KSFFNGLQIRFPFSFCVPXXXXXXXXXXXXXXXXX 60
           M++LS+A+  +A        ++TS  S F+G++I+   S  VP                 
Sbjct: 1   MLSLSIATPGTAAIFRRGTASATSTSSSFHGVRIQHQVSARVPAAATISSSSPKPSVVMM 60

Query: 61  XXXXXXLKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFKSSEFRRMRKRISRMLTV 120
                 LK+IR+KTTE++ EEVVDLKGEL MLRLQKSARNEFKSS+FRRM+K+++RMLTV
Sbjct: 61  SKREAELKEIRSKTTEQLQEEVVDLKGELFMLRLQKSARNEFKSSDFRRMKKQVARMLTV 120

Query: 121 KREREIEEGVGKRMSRKLDRKWKKSI 146
           KREREI+EG+ KR+SRKLDR+WKKSI
Sbjct: 121 KREREIKEGIKKRLSRKLDRQWKKSI 146

[Close]
BLAST of MELO3C018954.2 vs. Swiss-Prot
Match: sp|Q9FJP3|RK29_ARATH (50S ribosomal protein L29, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL29 PE=1 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 2.2e-29
Identity = 78/146 (53.42%), Postives = 102/146 (69.86%), Query Frame = 0 

Query: 1   MINLSVASLPSALPIPSKFLNSTS-KSFFNGLQIRFPFSFCVPXXXXXXXXXXXXXXXXX 60
           M++LS+A+  +A        ++TS  S F+G++I+   S  VP                 
Sbjct: 1   MLSLSIATPGTAAIFRRGTASATSTSSSFHGVRIQHQVSARVPAAATISSSSPKPSVVMM 60

Query: 61  XXXXXXLKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFKSSEFRRMRKRISRMLTV 120
                 LK+IR+KTTE++ EEVVDLKGEL MLRLQKSARNEFKSS+FRRM+K+++RMLTV
Sbjct: 61  SKREAELKEIRSKTTEQLQEEVVDLKGELFMLRLQKSARNEFKSSDFRRMKKQVARMLTV 120

Query: 121 KREREIEEGVGKRMSRKLDRKWKKSI 146
           KREREI+EG+ KR+SRKLDR+WKKSI
Sbjct: 121 KREREIKEGIKKRLSRKLDRQWKKSI 146

[Close]
BLAST of MELO3C018954.2 vs. Swiss-Prot
Match: sp|P82248|RK29_SPIOL (50S ribosomal protein L29, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL29 PE=1 SV=2)

HSP 1 Score: 114.4 bits (285), Expect = 1.3e-24
Identity = 57/80 (71.25%), Postives = 71/80 (88.75%), Query Frame = 0 

Query: 66  LKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFKSSEFRRMRKRISRMLTVKREREI 125
           LK++R KT E++NEE++ LKGEL MLRLQ+SAR  FK S+F RMRKR++RMLTVKREREI
Sbjct: 65  LKELRTKTNEQLNEEILQLKGELFMLRLQRSARENFKPSDFGRMRKRVARMLTVKREREI 124

Query: 126 EEGVGKRMSRKLDRKWKKSI 146
           E+GVGKR+SRKLD+ WK+SI
Sbjct: 125 EQGVGKRLSRKLDKAWKRSI 144

[Close]
BLAST of MELO3C018954.2 vs. Swiss-Prot
Match: sp|Q9SWI6|RK29_MAIZE (50S ribosomal protein L29, chloroplastic OS=Zea mays OX=4577 GN=RPL29 PE=2 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.7e-21
Identity = 54/67 (80.60%), Postives = 63/67 (94.03%), Query Frame = 0 

Query: 79  EEVVDLKGELLMLRLQKSARNEFKSSEFRRMRKRISRMLTVKREREIEEGVGKRMSRKLD 138
           EEVVDLKGEL +LRL++SAR EFK+SEF RMRKRI+RMLTVKREREIE+G+ KR+SRKLD
Sbjct: 81  EEVVDLKGELFLLRLKRSARQEFKNSEFSRMRKRIARMLTVKREREIEQGINKRLSRKLD 140

Query: 139 RKWKKSI 146
           RKWK+SI
Sbjct: 141 RKWKQSI 147

[Close]
BLAST of MELO3C018954.2 vs. Swiss-Prot
Match: sp|B8HMR2|RL29_CYAP4 (50S ribosomal protein L29 OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) OX=395961 GN=rpmC PE=3 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 4.2e-04
Identity = 20/62 (32.26%), Postives = 44/62 (70.97%), Query Frame = 0 

Query: 66  LKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFKSSEFRRMRKRISRMLTVKREREI 125
           +KD+   +  E+  +++DLK +L  LRLQK+ R E K  +F+ +R ++++++T++R+R++
Sbjct: 6   MKDLLDLSDAEVETQILDLKRQLFQLRLQKATRQEVKPHQFKHLRHQLAQLMTLERQRQL 65

Query: 126 EE 128
            +
Sbjct: 66  TQ 67

[Close]
BLAST of MELO3C018954.2 vs. Swiss-Prot
Match: sp|Q49ZG0|RL29_STAS1 (50S ribosomal protein L29 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) OX=342451 GN=rpmC PE=3 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 4.2e-04
Identity = 28/62 (45.16%), Postives = 39/62 (62.90%), Query Frame = 0 

Query: 67  KDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFKSSEFRRMRKRISRMLTVKREREIE 126
           K+IR  TT EI E++   K EL  LR Q +     +++  R +RK I+R+ TV REREIE
Sbjct: 4   KEIRDLTTSEIEEQIKSSKEELFNLRFQLATGQLEETARIRTVRKTIARLKTVAREREIE 63

Query: 127 EG 129
           +G
Sbjct: 64  QG 65

[Close]
BLAST of MELO3C018954.2 vs. TrEMBL
Match: tr|A0A1S3C2I8|A0A1S3C2I8_CUCME (50S ribosomal protein L29, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103495732 PE=3 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 4.3e-54
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0 

Query: 1   MINLSVASLPSALPIPSKFLNSTSKSFFNGLQIRFPFSFCVPXXXXXXXXXXXXXXXXXX 60
           MINLSVASLPSALPIPSKFLNSTSKSFFNGLQIRFPFSFCVPXXXXXXXXXXXXXXXXXX
Sbjct: 1   MINLSVASLPSALPIPSKFLNSTSKSFFNGLQIRFPFSFCVPXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXLKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFKSSEFRRMRKRISRMLTVK 120
           XXXXXLKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFKSSEFRRMRKRISRMLTVK
Sbjct: 61  XXXXXLKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFKSSEFRRMRKRISRMLTVK 120

Query: 121 REREIEEGVGKRMSRKLDRKWKKSIXXXXXXXXXXXXXXXXXXXXAEKSA 171
           REREIEEGVGKRMSRKLDRKWKKSIXXXXXXXXXXXXXXXXXXXXAEKSA
Sbjct: 121 REREIEEGVGKRMSRKLDRKWKKSIXXXXXXXXXXXXXXXXXXXXAEKSA 170

[Close]
BLAST of MELO3C018954.2 vs. TrEMBL
Match: tr|A0A0A0KVL7|A0A0A0KVL7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G095600 PE=3 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 5.4e-49
Identity = 137/170 (80.59%), Postives = 143/170 (84.12%), Query Frame = 0 

Query: 1   MINLSVASLPSALPIPSKFLNSTSKSFFNGLQIRFPFSFCVPXXXXXXXXXXXXXXXXXX 60
           MINLS+ASLPS LPIPSKFLNSTSKS FN LQIRFPFSF +P                  
Sbjct: 1   MINLSIASLPSTLPIPSKFLNSTSKSSFNALQIRFPFSFRLPPKTATTGRGRNSSVVMMA 60

Query: 61  XXXXXLKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFKSSEFRRMRKRISRMLTVK 120
                LKDIR+KTTEEINEEV+DLKGELLMLRLQKSARNEFKSSEFRRMRKRISRMLTV+
Sbjct: 61  KREDELKDIRSKTTEEINEEVIDLKGELLMLRLQKSARNEFKSSEFRRMRKRISRMLTVR 120

Query: 121 REREIEEGVGKRMSRKLDRKWKKSIXXXXXXXXXXXXXXXXXXXXAEKSA 171
           REREIEEGVGKR+SRKLDRKWKKSIXXXXXXXXXXXXXXXXXXXXAEKSA
Sbjct: 121 REREIEEGVGKRLSRKLDRKWKKSIXXXXXXXXXXXXXXXXXXXXAEKSA 170

[Close]
BLAST of MELO3C018954.2 vs. TrEMBL
Match: tr|F6HWM0|F6HWM0_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_07s0141g00200 PE=3 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 1.0e-31
Identity = 102/147 (69.39%), Postives = 118/147 (80.27%), Query Frame = 0 

Query: 1   MINLSVASLPSALPIPSKFLNSTSKSFFNGLQIRFPF--SFCVPXXXXXXXXXXXXXXXX 60
           M +LS+AS PS+L IP K  ++  KS FNG++I  P+  SF  P         XXXXXXX
Sbjct: 1   MFSLSIAS-PSSLKIPPKTTSTFPKSSFNGIRIPTPYKPSFRSP--------SXXXXXXX 60

Query: 61  XXXXXXXLKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFKSSEFRRMRKRISRMLT 120
           XXXXXX LK+IRAKTTEE+NEE+VDLKGELLMLRLQKS RNEFK SEF RMRKR++RMLT
Sbjct: 61  XXXXXXELKEIRAKTTEELNEEIVDLKGELLMLRLQKSVRNEFKPSEFGRMRKRVARMLT 120

Query: 121 VKREREIEEGVGKRMSRKLDRKWKKSI 146
           VKREREIEEG+ KR+SRKLDR+WKKSI
Sbjct: 121 VKREREIEEGINKRLSRKLDRQWKKSI 138

[Close]
BLAST of MELO3C018954.2 vs. TrEMBL
Match: tr|A0A2N9IXK7|A0A2N9IXK7_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS56906 PE=3 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 3.0e-31
Identity = 113/171 (66.08%), Postives = 126/171 (73.68%), Query Frame = 0 

Query: 1   MINLSVASLPSALPIPSKFLNSTSKSFFNGLQI-RFPFSFCVPXXXXXXXXXXXXXXXXX 60
           M++LS+AS PS +  P K      KS FNG++I +      VP                 
Sbjct: 1   MLSLSIAS-PSTITFPPKTHFPIPKSTFNGIKIQKHHCPIHVPPQAASFRNASASSVVMM 60

Query: 61  XXXXXXLKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFKSSEFRRMRKRISRMLTV 120
                 LK+IRAKTTEEINEEVVDLKGELLMLRLQKSARNEFKSSEF RMRKRI+RMLTV
Sbjct: 61  AKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFKSSEFGRMRKRIARMLTV 120

Query: 121 KREREIEEGVGKRMSRKLDRKWKKSIXXXXXXXXXXXXXXXXXXXXAEKSA 171
           KRERE+EEG+ KR+SRKLDR+WKKS XXXXXXXXXXXXXXXXXXXXAEKSA
Sbjct: 121 KREREVEEGINKRLSRKLDRQWKKSXXXXXXXXXXXXXXXXXXXXXAEKSA 170

[Close]
BLAST of MELO3C018954.2 vs. TrEMBL
Match: tr|F6I6Q6|F6I6Q6_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_12s0121g00010 PE=3 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 3.9e-31
Identity = 101/145 (69.66%), Postives = 114/145 (78.62%), Query Frame = 0 

Query: 1   MINLSVASLPSALPIPSKFLNSTSKSFFNGLQIRFPFSFCVPXXXXXXXXXXXXXXXXXX 60
           M +LS+AS PS+L IP K  ++  KS FNG  IR P     P         XXXXXXXXX
Sbjct: 1   MFSLSIAS-PSSLKIPPKTTSTFPKSSFNG--IRIP----TPNKPSFRSPSXXXXXXXXX 60

Query: 61  XXXXXLKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFKSSEFRRMRKRISRMLTVK 120
           XXXX LK+IRAKTTEE+NEE+VDLKGELLMLRLQKS RNEFK SEF RMRKR++RMLTVK
Sbjct: 61  XXXXELKEIRAKTTEELNEEIVDLKGELLMLRLQKSVRNEFKPSEFGRMRKRVARMLTVK 120

Query: 121 REREIEEGVGKRMSRKLDRKWKKSI 146
           REREIEEG+ KR+SRKLDR+WKKSI
Sbjct: 121 REREIEEGINKRLSRKLDRQWKKSI 138

The following BLAST results are available for this feature:
BLAST of MELO3C018954.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008455595.16.5e-54100.00PREDICTED: 50S ribosomal protein L29, chloroplastic [Cucumis melo][more]
XP_004137190.18.2e-4980.59PREDICTED: 50S ribosomal protein L29, chloroplastic [Cucumis sativus] >KGN53650.... [more]
XP_022985118.19.4e-4576.5550S ribosomal protein L29, chloroplastic-like [Cucurbita maxima][more]
XP_023551880.17.9e-4475.2950S ribosomal protein L29, chloroplastic-like [Cucurbita pepo subsp. pepo][more]
XP_022929361.11.8e-4375.1750S ribosomal protein L29, chloroplastic-like [Cucurbita moschata][more]
BLAST of MELO3C018954.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G65220.11.2e-3053.42Ribosomal L29 family protein [more]
BLAST of MELO3C018954.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9FJP3|RK29_ARATH2.2e-2953.4250S ribosomal protein L29, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL2... [more]
sp|P82248|RK29_SPIOL1.3e-2471.2550S ribosomal protein L29, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL29 P... [more]
sp|Q9SWI6|RK29_MAIZE1.7e-2180.6050S ribosomal protein L29, chloroplastic OS=Zea mays OX=4577 GN=RPL29 PE=2 SV=1[more]
sp|B8HMR2|RL29_CYAP44.2e-0432.2650S ribosomal protein L29 OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) OX=39... [more]
sp|Q49ZG0|RL29_STAS14.2e-0445.1650S ribosomal protein L29 OS=Staphylococcus saprophyticus subsp. saprophyticus (... [more]
BLAST of MELO3C018954.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3C2I8|A0A1S3C2I8_CUCME4.3e-54100.0050S ribosomal protein L29, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103495732... [more]
tr|A0A0A0KVL7|A0A0A0KVL7_CUCSA5.4e-4980.59Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G095600 PE=3 SV=1[more]
tr|F6HWM0|F6HWM0_VITVI1.0e-3169.39Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_07s0141g00200 PE=3 SV=... [more]
tr|A0A2N9IXK7|A0A2N9IXK7_FAGSY3.0e-3166.08Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS56906 PE=3 SV=1[more]
tr|F6I6Q6|F6I6Q6_VITVI3.9e-3169.66Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_12s0121g00010 PE=3 SV=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
GO:0005622intracellular
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: INTERPRO
TermDefinition
IPR036049Ribosomal_L29/L35_sf
IPR001854Ribosomal_L29/L35
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0005622 intracellular
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C018954.2.1MELO3C018954.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 153..170
NoneNo IPR availableGENE3DG3DSA:1.10.287.310coord: 65..129
e-value: 1.5E-13
score: 52.4
NoneNo IPR availablePANTHERPTHR1091660S RIBOSOMAL PROTEIN L35/50S RIBOSOMAL PROTEIN L29coord: 54..159
NoneNo IPR availableCDDcd00427Ribosomal_L29_HIPcoord: 67..123
e-value: 9.92657E-15
score: 64.4311
IPR001854Ribosomal protein L29/L35PFAMPF00831Ribosomal_L29coord: 67..123
e-value: 2.4E-13
score: 49.7
IPR001854Ribosomal protein L29/L35TIGRFAMTIGR00012TIGR00012coord: 68..123
e-value: 1.8E-14
score: 51.4
IPR001854Ribosomal protein L29/L35HAMAPMF_00374Ribosomal_L29coord: 64..123
score: 12.523
IPR036049Ribosomal protein L29/L35 superfamilySUPERFAMILYSSF46561Ribosomal protein L29 (L29p)coord: 66..126

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C018954.2Silver-seed gourdcarmedB0931
MELO3C018954.2Silver-seed gourdcarmedB1005
MELO3C018954.2Cucumber (Chinese Long) v3cucmedB296
MELO3C018954.2Watermelon (97103) v2medwmbB459
MELO3C018954.2Wax gourdmedwgoB571
MELO3C018954.2Cucumber (Gy14) v2cgybmedB257
MELO3C018954.2Cucumber (Gy14) v1cgymedB453
MELO3C018954.2Cucurbita maxima (Rimu)cmamedB352
MELO3C018954.2Cucurbita maxima (Rimu)cmamedB788
MELO3C018954.2Cucurbita moschata (Rifu)cmomedB340
MELO3C018954.2Cucurbita moschata (Rifu)cmomedB784
MELO3C018954.2Cucurbita pepo (Zucchini)cpemedB493
MELO3C018954.2Wild cucumber (PI 183967)cpimedB292
MELO3C018954.2Cucumber (Chinese Long) v2cumedB288
MELO3C018954.2Bottle gourd (USVL1VR-Ls)lsimedB286
MELO3C018954.2Watermelon (Charleston Gray)medwcgB449
MELO3C018954.2Watermelon (97103) v1medwmB481