MELO3C018922 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C018922
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionTranscription factor bHLH79
Locationchr7 : 13280612 .. 13280770 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTAGCAATAGCGGCGTTCGACAATCATTTGGCAGGCGTTCGGCAGGTGTTCGACAATCAGACATTCGATGACCAGGCGTTCGACGAGCAGGCGTTCGACTTCAGCGGGGTTCGGCAACAACGCTTTCAGCGTTCGAGGCGTTTGGGATGGGTGTAA

mRNA sequence

ATGGTAGCAATAGCGGCGTTCGACAATCATTTGGCAGGCGTTCGGCAGGTGTTCGACAATCAGACATTCGATGACCAGGCGTTCGACGAGCAGGCGTTCGACTTCAGCGGGGTTCGGCAACAACGCTTTCAGCGTTCGAGGCGTTTGGGATGGGTGTAA

Coding sequence (CDS)

ATGGTAGCAATAGCGGCGTTCGACAATCATTTGGCAGGCGTTCGGCAGGTGTTCGACAATCAGACATTCGATGACCAGGCGTTCGACGAGCAGGCGTTCGACTTCAGCGGGGTTCGGCAACAACGCTTTCAGCGTTCGAGGCGTTTGGGATGGGTGTAA

Protein sequence

MVAIAAFDNHLAGVRQVFDNQTFDDQAFDEQAFDFSGVRQQRFQRSRRLGWV*
Homology
[Close]
BLAST of MELO3C018922 vs. NCBI nr
Match: gi|659111280|ref|XP_008455670.1| (PREDICTED: uncharacterized protein LOC103495784 [Cucumis melo])

HSP 1 Score: 95.1 bits (235), Expect = 3.8e-17
Identity = 46/48 (95.83%), Postives = 47/48 (97.92%), Query Frame = 1 

Query: 1  MVAIAAFDNHLAGVRQVFDNQTFDDQAFDEQAFDFSGVRQQRFQRSRR 49
          MVAIAAFDNHLAGVRQVFDNQTFDDQAFDEQAFDFSGVRQQRFQ SR+
Sbjct: 1  MVAIAAFDNHLAGVRQVFDNQTFDDQAFDEQAFDFSGVRQQRFQLSRQ 48

The following BLAST results are available for this feature:
BLAST of MELO3C018922 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659111280|ref|XP_008455670.1|3.8e-1795.83PREDICTED: uncharacterized protein LOC103495784 [Cucumis melo][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C018922T1MELO3C018922T1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C018922Silver-seed gourdcarmeB0699
MELO3C018922Silver-seed gourdcarmeB0814
MELO3C018922Watermelon (97103) v2mewmbB493
MELO3C018922Wax gourdmewgoB581
MELO3C018922Cucurbita maxima (Rimu)cmameB246
MELO3C018922Cucurbita maxima (Rimu)cmameB435
MELO3C018922Cucurbita moschata (Rifu)cmomeB234
MELO3C018922Cucurbita moschata (Rifu)cmomeB426
MELO3C018922Watermelon (Charleston Gray)mewcgB487
MELO3C018922Watermelon (97103) v1mewmB515
MELO3C018922Cucurbita pepo (Zucchini)cpemeB541
MELO3C018922Cucurbita pepo (Zucchini)cpemeB590
MELO3C018922Bottle gourd (USVL1VR-Ls)lsimeB448