MELO3C018886.2 (gene) Melon (DHL92) v3.6.1

NameMELO3C018886.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionBnaA09g54870D protein
Locationchr01 : 3685207 .. 3685491 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACCATTCCAACTCCAGGCATTTTCCTTTTGTGACGACTCTTGTTTTCTCTATCATAGTCGTTCTTGTCCTGTCCTCAAAAGTGGCAACAAGAGACCTTTTACATGACGGACATGGCAGCTCCGCGGACACCCCTGGCTGCGGAAATTACAATAGATGCGGTGGGTACGGTAGAGGTGGAGGTGGAGATGGTTGCTCACATGGTTGCTGTGGTTTCAATCGTGGTGGTCGATGCATCCAATGTTGCAACTATGCTAATGAAGTCACAAATGTAAAACCCTAA

mRNA sequence

ATGAACCATTCCAACTCCAGGCATTTTCCTTTTGTGACGACTCTTGTTTTCTCTATCATAGTCGTTCTTGTCCTGTCCTCAAAAGTGGCAACAAGAGACCTTTTACATGACGGACATGGCAGCTCCGCGGACACCCCTGGCTGCGGAAATTACAATAGATGCGGTGGGTACGGTAGAGGTGGAGGTGGAGATGGTTGCTCACATGGTTGCTGTGGTTTCAATCGTGGTGGTCGATGCATCCAATGTTGCAACTATGCTAATGAAGTCACAAATGTAAAACCCTAA

Coding sequence (CDS)

ATGAACCATTCCAACTCCAGGCATTTTCCTTTTGTGACGACTCTTGTTTTCTCTATCATAGTCGTTCTTGTCCTGTCCTCAAAAGTGGCAACAAGAGACCTTTTACATGACGGACATGGCAGCTCCGCGGACACCCCTGGCTGCGGAAATTACAATAGATGCGGTGGGTACGGTAGAGGTGGAGGTGGAGATGGTTGCTCACATGGTTGCTGTGGTTTCAATCGTGGTGGTCGATGCATCCAATGTTGCAACTATGCTAATGAAGTCACAAATGTAAAACCCTAA

Protein sequence

MNHSNSRHFPFVTTLVFSIIVVLVLSSKVATRDLLHDGHGSSADTPGCGNYNRCGGYGRGGGGDGCSHGCCGFNRGGRCIQCCNYANEVTNVKP
BLAST of MELO3C018886.2 vs. NCBI nr
Match: KGN43451.1 (hypothetical protein Csa_7G037550 [Cucumis sativus])

HSP 1 Score: 163.7 bits (413), Expect = 3.0e-37
Identity = 77/94 (81.91%), Postives = 81/94 (86.17%), Query Frame = 0

Query: 1  MNHSNSRHFPFVTTLVFSIIVVLVLSSKVATRDLLHDGHGSSADTPGCGNYNRCGGXXXX 60
          MN+SNS+HFPFVTTLVFSI+VVLVLS KVA RDLL DG GSSADTPGCGNY RCGG    
Sbjct: 1  MNYSNSKHFPFVTTLVFSIVVVLVLSPKVAARDLLSDGRGSSADTPGCGNYYRCGGYGRG 60

Query: 61 XXGDGCSHGCCGFNRGGRCIQCCNYANEVTNVKP 95
            G+GCSHGCCGFNR GRCIQCCNYANEVTNV P
Sbjct: 61 GGGNGCSHGCCGFNRDGRCIQCCNYANEVTNVNP 94

BLAST of MELO3C018886.2 vs. NCBI nr
Match: XP_023530312.1 (glycine-rich protein DC7.1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 62.4 bits (150), Expect = 9.5e-07
Identity = 38/79 (48.10%), Postives = 46/79 (58.23%), Query Frame = 0

Query: 20 IVVLVLSSKVATRDLLH-------DGHGSSA-DTPGCGNY-NRCGGXXXXXXGDGCSHGC 79
          IVV+ +SS+VA RDLL        +G GS   D PGCGNY + C G        GC HGC
Sbjct: 18 IVVVDISSEVAARDLLQTKYSRGDNGSGSGVDDNPGCGNYIDSCRGHGPV---GGCQHGC 77

Query: 80 CGFNRGGRCIQCCNYANEV 90
          CG   GGRC +CC+  +EV
Sbjct: 78 CGTKNGGRCSKCCSNVSEV 93

BLAST of MELO3C018886.2 vs. NCBI nr
Match: XP_022930692.1 (glycine-rich protein DC7.1-like [Cucurbita moschata])

HSP 1 Score: 62.0 bits (149), Expect = 1.2e-06
Identity = 36/79 (45.57%), Postives = 47/79 (59.49%), Query Frame = 0

Query: 20 IVVLVLSSKVATRDLL-----HDGHGSSA---DTPGCGNY-NRCGGXXXXXXGDGCSHGC 79
          ++V+ +SS+VA RDLL       G+GS +   D PGCGNY + C G        GC HGC
Sbjct: 18 VIVVDISSEVAARDLLQTKYSRGGNGSGSGVDDNPGCGNYIDSCRGHGPV---GGCQHGC 77

Query: 80 CGFNRGGRCIQCCNYANEV 90
          CG   GGRC +CC+  +EV
Sbjct: 78 CGTKNGGRCSKCCSNVSEV 93

BLAST of MELO3C018886.2 vs. NCBI nr
Match: XP_022989540.1 (glycine-rich protein DC7.1-like [Cucurbita maxima])

HSP 1 Score: 59.3 bits (142), Expect = 8.1e-06
Identity = 36/78 (46.15%), Postives = 45/78 (57.69%), Query Frame = 0

Query: 20 IVVLVLSSKVATRDLLH-------DGHGSSA-DTPGCGNY-NRCGGXXXXXXGDGCSHGC 79
          +VV+ +SS+VA RDLL        +G GS   D PGCGNY + C G        GC HGC
Sbjct: 18 VVVVDISSEVAARDLLQTKYSRGDNGSGSGVDDIPGCGNYFDSCRG---HGPDGGCQHGC 77

Query: 80 CGFNRGGRCIQCCNYANE 89
          CG   GGRC +CC+  +E
Sbjct: 78 CGTKNGGRCSKCCSNVSE 92

BLAST of MELO3C018886.2 vs. TrEMBL
Match: tr|A0A0A0K6K9|A0A0A0K6K9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G037550 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 2.0e-37
Identity = 77/94 (81.91%), Postives = 81/94 (86.17%), Query Frame = 0

Query: 1  MNHSNSRHFPFVTTLVFSIIVVLVLSSKVATRDLLHDGHGSSADTPGCGNYNRCGGXXXX 60
          MN+SNS+HFPFVTTLVFSI+VVLVLS KVA RDLL DG GSSADTPGCGNY RCGG    
Sbjct: 1  MNYSNSKHFPFVTTLVFSIVVVLVLSPKVAARDLLSDGRGSSADTPGCGNYYRCGGYGRG 60

Query: 61 XXGDGCSHGCCGFNRGGRCIQCCNYANEVTNVKP 95
            G+GCSHGCCGFNR GRCIQCCNYANEVTNV P
Sbjct: 61 GGGNGCSHGCCGFNRDGRCIQCCNYANEVTNVNP 94

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN43451.13.0e-3781.91hypothetical protein Csa_7G037550 [Cucumis sativus][more]
XP_023530312.19.5e-0748.10glycine-rich protein DC7.1-like [Cucurbita pepo subsp. pepo][more]
XP_022930692.11.2e-0645.57glycine-rich protein DC7.1-like [Cucurbita moschata][more]
XP_022989540.18.1e-0646.15glycine-rich protein DC7.1-like [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0K6K9|A0A0A0K6K9_CUCSA2.0e-3781.91Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G037550 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C018886.2.1MELO3C018886.2.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C018886.2Csa7G037550Cucumber (Chinese Long) v2cumedB509
MELO3C018886.2CSPI07G03030Wild cucumber (PI 183967)cpimedB523
MELO3C018886.2CsaV3_7G002930Cucumber (Chinese Long) v3cucmedB536
The following gene(s) are paralogous to this gene:

None