MELO3C018884 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C018884
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
Descriptiondicer-like 2
Locationchr1 : 3679968 .. 3680126 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAACCGCCATGGTTATGGAGGAGGACACGCTAGAATCCTCCAACAATGCCTCCATGGTTGCAACACCGGTTGTTGTAGCTGCGTCCGCGGTCGTTGCGTCCGGTGCTGCTAGATTGGCTGGTGAGACCGTGGTTGATATAGAAACCTCAAGATAA

mRNA sequence

ATGTCAACCGCCATGGTTATGGAGGAGGACACGCTAGAATCCTCCAACAATGCCTCCATGGTTGCAACACCGGTTGTTGTAGCTGCGTCCGCGGTCGTTGCGTCCGGTGCTGCTAGATTGGCTGGTGAGACCGTGGTTGATATAGAAACCTCAAGATAA

Coding sequence (CDS)

ATGTCAACCGCCATGGTTATGGAGGAGGACACGCTAGAATCCTCCAACAATGCCTCCATGGTTGCAACACCGGTTGTTGTAGCTGCGTCCGCGGTCGTTGCGTCCGGTGCTGCTAGATTGGCTGGTGAGACCGTGGTTGATATAGAAACCTCAAGATAA

Protein sequence

MSTAMVMEEDTLESSNNASMVATPVVVAASAVVASGAARLAGETVVDIETSR*
Homology
[Close]
BLAST of MELO3C018884 vs. TrEMBL
Match: A0A0A0K1A3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G037540 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 3.5e-09
Identity = 38/46 (82.61%), Postives = 40/46 (86.96%), Query Frame = 1 

Query: 2   STAMVMEEDTLESSNNASMVATPVVVAASAVVASGAARLAGETVVD 48
           STAMV+EED L+SSNNASMVA  VVVAAS VVAS AARLAGE VVD
Sbjct: 66  STAMVLEEDKLDSSNNASMVAGTVVVAASVVVASIAARLAGEAVVD 111

[Close]
BLAST of MELO3C018884 vs. NCBI nr
Match: gi|700188217|gb|KGN43450.1| (hypothetical protein Csa_7G037540 [Cucumis sativus])

HSP 1 Score: 68.2 bits (165), Expect = 5.0e-09
Identity = 38/46 (82.61%), Postives = 40/46 (86.96%), Query Frame = 1 

Query: 2   STAMVMEEDTLESSNNASMVATPVVVAASAVVASGAARLAGETVVD 48
           STAMV+EED L+SSNNASMVA  VVVAAS VVAS AARLAGE VVD
Sbjct: 66  STAMVLEEDKLDSSNNASMVAGTVVVAASVVVASIAARLAGEAVVD 111

The following BLAST results are available for this feature:
BLAST of MELO3C018884 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K1A3_CUCSA3.5e-0982.61Uncharacterized protein OS=Cucumis sativus GN=Csa_7G037540 PE=4 SV=1[more]
BLAST of MELO3C018884 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700188217|gb|KGN43450.1|5.0e-0982.61hypothetical protein Csa_7G037540 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU45675melon EST collection version 4.0transcribed_cluster
MU54258melon EST collection version 4.0transcribed_cluster
MU54812melon EST collection version 4.0transcribed_cluster
MU57766melon EST collection version 4.0transcribed_cluster
MU62165melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C018884T1MELO3C018884T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU45675MU45675transcribed_cluster
MU62165MU62165transcribed_cluster
MU54258MU54258transcribed_cluster
MU54812MU54812transcribed_cluster
MU57766MU57766transcribed_cluster