MELO3C018877.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C018877.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionCalcium-binding EF-hand family protein
Locationchr01 : 3555548 .. 3555964 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGCGTAGAGATCTTGGACAGTGCAACCATTGTGAATTTTGTGGAAGATGAAGAAGCTTTCAGTGGTTGGATTAGAGAGCGTTTTAGCCATCTTGATATGGACAGAGATGGAGTTCTTTGTTATGGAGAGATGTTGAAGGAGTTGCAGAGTCTTAGGGTATTCGAGACTCATTTTGGGATCGATACGAAACCCGATCCGAACGAGCTTTCGTCCGTCTACGCCTCCTTGTTCTTACAGTTCGATCGCGACTGCAATGGAAAAGTTGATCTTGGTGAATTCATGGCAGAAACCAAGAAGATGATGTTGGCCATGGCTAATGGAATTGGCCTTTCTCCTGTTCAAATGTTGTTGGAAGAAAATAGTTTCTTGAAGAAAGCTGTGGATAGGGAATCCACCAAACTCGCTGCGGCTTAA

mRNA sequence

ATGAGCGTAGAGATCTTGGACAGTGCAACCATTGTGAATTTTGTGGAAGATGAAGAAGCTTTCAGTGGTTGGATTAGAGAGCGTTTTAGCCATCTTGATATGGACAGAGATGGAGTTCTTTGTTATGGAGAGATGTTGAAGGAGTTGCAGAGTCTTAGGGTATTCGAGACTCATTTTGGGATCGATACGAAACCCGATCCGAACGAGCTTTCGTCCGTCTACGCCTCCTTGTTCTTACAGTTCGATCGCGACTGCAATGGAAAAGTTGATCTTGGTGAATTCATGGCAGAAACCAAGAAGATGATGTTGGCCATGGCTAATGGAATTGGCCTTTCTCCTGTTCAAATGTTGTTGGAAGAAAATAGTTTCTTGAAGAAAGCTGTGGATAGGGAATCCACCAAACTCGCTGCGGCTTAA

Coding sequence (CDS)

ATGAGCGTAGAGATCTTGGACAGTGCAACCATTGTGAATTTTGTGGAAGATGAAGAAGCTTTCAGTGGTTGGATTAGAGAGCGTTTTAGCCATCTTGATATGGACAGAGATGGAGTTCTTTGTTATGGAGAGATGTTGAAGGAGTTGCAGAGTCTTAGGGTATTCGAGACTCATTTTGGGATCGATACGAAACCCGATCCGAACGAGCTTTCGTCCGTCTACGCCTCCTTGTTCTTACAGTTCGATCGCGACTGCAATGGAAAAGTTGATCTTGGTGAATTCATGGCAGAAACCAAGAAGATGATGTTGGCCATGGCTAATGGAATTGGCCTTTCTCCTGTTCAAATGTTGTTGGAAGAAAATAGTTTCTTGAAGAAAGCTGTGGATAGGGAATCCACCAAACTCGCTGCGGCTTAA

Protein sequence

MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVFETHFGIDTKPDPNELSSVYASLFLQFDRDCNGKVDLGEFMAETKKMMLAMANGIGLSPVQMLLEENSFLKKAVDRESTKLAAA
Homology
[Close]
BLAST of MELO3C018877.2 vs. NCBI nr
Match: XP_008455503.1 (PREDICTED: uncharacterized protein LOC103495655 [Cucumis melo])

HSP 1 Score: 276.9 bits (707), Expect = 3.6e-71
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0 

Query: 1   MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVFETHFG 60
           MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVFETHFG
Sbjct: 1   MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVFETHFG 60

Query: 61  IDTKPDPNELSSVYASLFLQFDRDCNGKVDLGEFMAETKKMMLAMANGIGLSPVQMLLEE 120
           IDTKPDPNELSSVYASLFLQFDRDCNGKVDLGEFMAETKKMMLAMANGIGLSPVQMLLEE
Sbjct: 61  IDTKPDPNELSSVYASLFLQFDRDCNGKVDLGEFMAETKKMMLAMANGIGLSPVQMLLEE 120

Query: 121 NSFLKKAVDRESTKLAAA 139
           NSFLKKAVDRESTKLAAA
Sbjct: 121 NSFLKKAVDRESTKLAAA 138

[Close]
BLAST of MELO3C018877.2 vs. NCBI nr
Match: XP_004144527.1 (PREDICTED: uncharacterized protein LOC101208564 [Cucumis sativus] >KGN43458.1 Calcium ion binding protein [Cucumis sativus])

HSP 1 Score: 266.5 bits (680), Expect = 4.9e-68
Identity = 132/138 (95.65%), Postives = 135/138 (97.83%), Query Frame = 0 

Query: 1   MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVFETHFG 60
           MSVEIL+SATI+NFVEDEEAFSGWIRERFSHLD+DRDGVLCYGEMLKELQSLRV ETHFG
Sbjct: 1   MSVEILNSATIMNFVEDEEAFSGWIRERFSHLDIDRDGVLCYGEMLKELQSLRVLETHFG 60

Query: 61  IDTKPDPNELSSVYASLFLQFDRDCNGKVDLGEFMAETKKMMLAMANGIGLSPVQMLLEE 120
           IDTKPDPNELSSVY SLFLQFDRDCNGKVDLGEFM ETKKMMLAMANGIGLSPVQMLLEE
Sbjct: 61  IDTKPDPNELSSVYGSLFLQFDRDCNGKVDLGEFMEETKKMMLAMANGIGLSPVQMLLEE 120

Query: 121 NSFLKKAVDRESTKLAAA 139
           NSFLKKAVDRESTKLAAA
Sbjct: 121 NSFLKKAVDRESTKLAAA 138

[Close]
BLAST of MELO3C018877.2 vs. NCBI nr
Match: XP_022952569.1 (uncharacterized protein LOC111455222 [Cucurbita moschata])

HSP 1 Score: 238.0 bits (606), Expect = 1.9e-59
Identity = 120/138 (86.96%), Postives = 125/138 (90.58%), Query Frame = 0 

Query: 1   MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVFETHFG 60
           MSVEILDSATIV+FVEDEEAF   I E F  LDMDRDGVL YGEMLKELQSLRV ETHFG
Sbjct: 1   MSVEILDSATIVSFVEDEEAFRATITEHFRELDMDRDGVLSYGEMLKELQSLRVLETHFG 60

Query: 61  IDTKPDPNELSSVYASLFLQFDRDCNGKVDLGEFMAETKKMMLAMANGIGLSPVQMLLEE 120
           +D KPDP ELSSVYASLF QFDRDCNGKVDLGEFMAET+KMMLAMANGIGLSPV+M+LEE
Sbjct: 61  VDVKPDPEELSSVYASLFSQFDRDCNGKVDLGEFMAETRKMMLAMANGIGLSPVRMVLEE 120

Query: 121 NSFLKKAVDRESTKLAAA 139
           NSFLKKAVDRESTKLA A
Sbjct: 121 NSFLKKAVDRESTKLAVA 138

[Close]
BLAST of MELO3C018877.2 vs. NCBI nr
Match: XP_023554639.1 (uncharacterized protein LOC111811829 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 235.7 bits (600), Expect = 9.2e-59
Identity = 119/138 (86.23%), Postives = 124/138 (89.86%), Query Frame = 0 

Query: 1   MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVFETHFG 60
           MSVEILDSATIV+FVEDEEAF   I E F  LDMDRDGVL YGEMLKELQSLRV ETHFG
Sbjct: 1   MSVEILDSATIVSFVEDEEAFRATITEHFRELDMDRDGVLSYGEMLKELQSLRVLETHFG 60

Query: 61  IDTKPDPNELSSVYASLFLQFDRDCNGKVDLGEFMAETKKMMLAMANGIGLSPVQMLLEE 120
           +D KPDP ELSSVYASLF QFDRDCNGKVDLGEFMAET+KMMLAMANGIGLSPV+M+LEE
Sbjct: 61  VDVKPDPEELSSVYASLFSQFDRDCNGKVDLGEFMAETRKMMLAMANGIGLSPVRMVLEE 120

Query: 121 NSFLKKAVDRESTKLAAA 139
           NS LKKAVDRESTKLA A
Sbjct: 121 NSLLKKAVDRESTKLAVA 138

[Close]
BLAST of MELO3C018877.2 vs. NCBI nr
Match: XP_022930660.1 (uncharacterized protein LOC111437061 [Cucurbita moschata])

HSP 1 Score: 232.3 bits (591), Expect = 1.0e-57
Identity = 114/137 (83.21%), Postives = 125/137 (91.24%), Query Frame = 0 

Query: 1   MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVFETHFG 60
           MSVEILDSATIVNFVED+E F   +RERFSHLD+D DGVL Y EML+ELQSLRVFETHFG
Sbjct: 1   MSVEILDSATIVNFVEDDEVFGAIVRERFSHLDIDGDGVLSYEEMLRELQSLRVFETHFG 60

Query: 61  IDTKPDPNELSSVYASLFLQFDRDCNGKVDLGEFMAETKKMMLAMANGIGLSPVQMLLEE 120
           ID KPDP+ELSSVY SLFLQFDRDC+GKVD+GEFM ETKKMM+AMANGIG SPVQM+LEE
Sbjct: 61  IDVKPDPDELSSVYGSLFLQFDRDCDGKVDVGEFMEETKKMMVAMANGIGFSPVQMVLEE 120

Query: 121 NSFLKKAVDRESTKLAA 138
           NSFLKKAV+RESTK+ A
Sbjct: 121 NSFLKKAVERESTKVGA 137

[Close]
BLAST of MELO3C018877.2 vs. TAIR10
Match: AT2G44310.1 (Calcium-binding EF-hand family protein)

HSP 1 Score: 131.3 bits (329), Expect = 4.5e-31
Identity = 63/140 (45.00%), Postives = 101/140 (72.14%), Query Frame = 0 

Query: 1   MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVFETHFG 60
           M V ++D +T+ +FV+DEE F   + ERF+ LD+++DGVL   E+ K  +S+R+ E+HFG
Sbjct: 1   MGVVLIDGSTVRSFVDDEEQFKKSVDERFAALDLNKDGVLSRSELRKAFESMRLLESHFG 60

Query: 61  IDTKPDPNELSSVYASLFLQFDRDCNGKVDLGEFMAETKKMMLAMANGIGLSPVQMLL-- 120
           +D     +EL+++Y S+F +FD D +G VDL EF +E KK++LA+A+G+G  P+ M+L  
Sbjct: 61  VDVVTPQDELTNLYDSIFEKFDTDQSGSVDLEEFRSEMKKIVLAIADGLGSCPITMVLDD 120

Query: 121 EENSFLKKAVDRESTKLAAA 139
           ++++FLKKA D E++KL  A
Sbjct: 121 DDDNFLKKAADLEASKLEKA 140

[Close]
BLAST of MELO3C018877.2 vs. TAIR10
Match: AT1G54530.1 (Calcium-binding EF hand family protein)

HSP 1 Score: 60.5 bits (145), Expect = 9.7e-10
Identity = 38/128 (29.69%), Postives = 69/128 (53.91%), Query Frame = 0 

Query: 5   ILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVFETHFGIDTK 64
           ++ S T++ F+ D ++F     + F  LD+D++G+L   E+ + L ++   E+       
Sbjct: 5   VITSKTLIGFLSDTKSFESITNDYFQILDLDKNGMLSPSELRQGLNNVVAVESEVA---- 64

Query: 65  PDPNELSSVYASLFLQFDRDCNGKVDLGEFMAETKKMMLAMANGIGLSPVQMLLEENSFL 124
              +E  +VY ++F +F  D   K +  + +AE   ++ AMA GIG SPV M++  +  +
Sbjct: 65  -PGDETDNVYNAIFERFGEDLVPK-NFRDLIAE---ILTAMARGIGNSPVIMVVHNDGLI 123

Query: 125 KKAVDRES 133
            KAV  ES
Sbjct: 125 MKAVLHES 123

[Close]
BLAST of MELO3C018877.2 vs. TAIR10
Match: AT4G38810.2 (Calcium-binding EF-hand family protein)

HSP 1 Score: 55.8 bits (133), Expect = 2.4e-08
Identity = 33/125 (26.40%), Postives = 57/125 (45.60%), Query Frame = 0 

Query: 4   EILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVFETHFGIDT 63
           ++LD + IV  VE+E+ F  ++ ++F  LD D DG L   E+   +  +          T
Sbjct: 13  QVLDGSDIVELVENEKVFDKFVEQKFQQLDQDEDGKLSVTELQPAVADIGAALGLPAQGT 72

Query: 64  KPDPNELSSVYASLFLQFDRDCNGKVDLGEFMAETKKMMLAMANGIGLSPVQMLLEENSF 123
            PD +    +Y+ +  +F      KV   EF      ++L MA G+   P+ +L  +   
Sbjct: 73  SPDSDH---IYSEVLNEFTHGSQEKVSKTEFKEVLSDILLGMAAGLKRDPIVILRMDGED 132

Query: 124 LKKAV 129
           L + V
Sbjct: 133 LSEFV 134

[Close]
BLAST of MELO3C018877.2 vs. TrEMBL
Match: tr|A0A1S3C1T0|A0A1S3C1T0_CUCME (uncharacterized protein LOC103495655 OS=Cucumis melo OX=3656 GN=LOC103495655 PE=4 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 2.4e-71
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0 

Query: 1   MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVFETHFG 60
           MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVFETHFG
Sbjct: 1   MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVFETHFG 60

Query: 61  IDTKPDPNELSSVYASLFLQFDRDCNGKVDLGEFMAETKKMMLAMANGIGLSPVQMLLEE 120
           IDTKPDPNELSSVYASLFLQFDRDCNGKVDLGEFMAETKKMMLAMANGIGLSPVQMLLEE
Sbjct: 61  IDTKPDPNELSSVYASLFLQFDRDCNGKVDLGEFMAETKKMMLAMANGIGLSPVQMLLEE 120

Query: 121 NSFLKKAVDRESTKLAAA 139
           NSFLKKAVDRESTKLAAA
Sbjct: 121 NSFLKKAVDRESTKLAAA 138

[Close]
BLAST of MELO3C018877.2 vs. TrEMBL
Match: tr|A0A0A0K1Y0|A0A0A0K1Y0_CUCSA (Calcium ion binding protein OS=Cucumis sativus OX=3659 GN=Csa_7G037620 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 3.2e-68
Identity = 132/138 (95.65%), Postives = 135/138 (97.83%), Query Frame = 0 

Query: 1   MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVFETHFG 60
           MSVEIL+SATI+NFVEDEEAFSGWIRERFSHLD+DRDGVLCYGEMLKELQSLRV ETHFG
Sbjct: 1   MSVEILNSATIMNFVEDEEAFSGWIRERFSHLDIDRDGVLCYGEMLKELQSLRVLETHFG 60

Query: 61  IDTKPDPNELSSVYASLFLQFDRDCNGKVDLGEFMAETKKMMLAMANGIGLSPVQMLLEE 120
           IDTKPDPNELSSVY SLFLQFDRDCNGKVDLGEFM ETKKMMLAMANGIGLSPVQMLLEE
Sbjct: 61  IDTKPDPNELSSVYGSLFLQFDRDCNGKVDLGEFMEETKKMMLAMANGIGLSPVQMLLEE 120

Query: 121 NSFLKKAVDRESTKLAAA 139
           NSFLKKAVDRESTKLAAA
Sbjct: 121 NSFLKKAVDRESTKLAAA 138

[Close]
BLAST of MELO3C018877.2 vs. TrEMBL
Match: tr|A0A061DTS7|A0A061DTS7_THECC (Calcium-binding EF-hand family protein OS=Theobroma cacao OX=3641 GN=TCM_002258 PE=4 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 1.3e-53
Identity = 108/137 (78.83%), Postives = 119/137 (86.86%), Query Frame = 0 

Query: 1   MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVFETHFG 60
           MSVE+LDSATIVNFVEDEEAF+ WI +RF+HLD D DG+L Y E+LKELQSLRVFETHFG
Sbjct: 1   MSVEVLDSATIVNFVEDEEAFNVWICDRFAHLDTDHDGLLSYAELLKELQSLRVFETHFG 60

Query: 61  IDTKPDPNELSSVYASLFLQFDRDCNGKVDLGEFMAETKKMMLAMANGIGLSPVQMLLEE 120
           ID K DP EL+ VY SLF+QFD D NG VDLGEF AE+K+MMLAMANG+G  PVQMLLEE
Sbjct: 61  IDVKTDPKELAHVYNSLFVQFDHDSNGTVDLGEFKAESKRMMLAMANGMGFLPVQMLLEE 120

Query: 121 NSFLKKAVDRESTKLAA 138
            SFLKKAVDRESTKLAA
Sbjct: 121 GSFLKKAVDRESTKLAA 137

[Close]
BLAST of MELO3C018877.2 vs. TrEMBL
Match: tr|A0A1R3JWY4|A0A1R3JWY4_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_03841 PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 2.3e-50
Identity = 102/138 (73.91%), Postives = 117/138 (84.78%), Query Frame = 0 

Query: 1   MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVFETHFG 60
           MSVE+LD ATIVNF+EDEEAF+G+I +RF+ LD D DG+L Y E+LKELQSLRVFETHFG
Sbjct: 1   MSVEVLDGATIVNFIEDEEAFNGYICDRFALLDSDHDGLLSYAELLKELQSLRVFETHFG 60

Query: 61  IDTKPDPNELSSVYASLFLQFDRDCNGKVDLGEFMAETKKMMLAMANGIGLSPVQMLLEE 120
           ID K DP EL+ VY SLF+QFD D NG VDL EF AETK+MMLAMANG+G  P+QM+LEE
Sbjct: 61  IDVKTDPKELARVYNSLFVQFDHDSNGTVDLEEFKAETKRMMLAMANGLGFLPIQMVLEE 120

Query: 121 NSFLKKAVDRESTKLAAA 139
            SFLKKAV+RESTKLA A
Sbjct: 121 GSFLKKAVERESTKLALA 138

[Close]
BLAST of MELO3C018877.2 vs. TrEMBL
Match: tr|A0A1R3JWX2|A0A1R3JWX2_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_03837 PE=4 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 3.0e-50
Identity = 105/138 (76.09%), Postives = 115/138 (83.33%), Query Frame = 0 

Query: 1   MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVFETHFG 60
           MSVE+LD ATIVNFVEDEEAFSG I +RFS LD D DG+L Y E+LKELQSLRVFETHFG
Sbjct: 1   MSVEVLDGATIVNFVEDEEAFSGSISDRFSLLDTDHDGLLSYAELLKELQSLRVFETHFG 60

Query: 61  IDTKPDPNELSSVYASLFLQFDRDCNGKVDLGEFMAETKKMMLAMANGIGLSPVQMLLEE 120
           ID K DP EL+ VY SLF+QFD D NG VDL EF AETK+MMLAMANG+G  PVQM+LEE
Sbjct: 61  IDVKTDPKELARVYNSLFVQFDHDSNGTVDLEEFKAETKRMMLAMANGLGFLPVQMVLEE 120

Query: 121 NSFLKKAVDRESTKLAAA 139
            SFLKKAV+RES KLA A
Sbjct: 121 GSFLKKAVERESIKLALA 138

The following BLAST results are available for this feature:
BLAST of MELO3C018877.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008455503.13.6e-71100.00PREDICTED: uncharacterized protein LOC103495655 [Cucumis melo][more]
XP_004144527.14.9e-6895.65PREDICTED: uncharacterized protein LOC101208564 [Cucumis sativus] >KGN43458.1 Ca... [more]
XP_022952569.11.9e-5986.96uncharacterized protein LOC111455222 [Cucurbita moschata][more]
XP_023554639.19.2e-5986.23uncharacterized protein LOC111811829 [Cucurbita pepo subsp. pepo][more]
XP_022930660.11.0e-5783.21uncharacterized protein LOC111437061 [Cucurbita moschata][more]
BLAST of MELO3C018877.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G44310.14.5e-3145.00Calcium-binding EF-hand family protein[more]
AT1G54530.19.7e-1029.69Calcium-binding EF hand family protein[more]
AT4G38810.22.4e-0826.40Calcium-binding EF-hand family protein[more]
BLAST of MELO3C018877.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C018877.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3C1T0|A0A1S3C1T0_CUCME2.4e-71100.00uncharacterized protein LOC103495655 OS=Cucumis melo OX=3656 GN=LOC103495655 PE=... [more]
tr|A0A0A0K1Y0|A0A0A0K1Y0_CUCSA3.2e-6895.65Calcium ion binding protein OS=Cucumis sativus OX=3659 GN=Csa_7G037620 PE=4 SV=1[more]
tr|A0A061DTS7|A0A061DTS7_THECC1.3e-5378.83Calcium-binding EF-hand family protein OS=Theobroma cacao OX=3641 GN=TCM_002258 ... [more]
tr|A0A1R3JWY4|A0A1R3JWY4_COCAP2.3e-5073.91Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_03841 PE=4 ... [more]
tr|A0A1R3JWX2|A0A1R3JWX2_COCAP3.0e-5076.09Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_03837 PE=4 ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
Vocabulary: INTERPRO
TermDefinition
IPR011992EF-hand-dom_pair
IPR018247EF_Hand_1_Ca_BS
IPR002048EF_hand_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005509 calcium ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C018877.2.1MELO3C018877.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 24..52
e-value: 2.1
score: 15.1
coord: 73..101
e-value: 5.6
score: 11.7
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 25..96
e-value: 5.0E-9
score: 36.4
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 25..55
score: 7.567
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 69..104
score: 9.074
NoneNo IPR availableGENE3DG3DSA:1.10.238.10coord: 24..105
e-value: 3.0E-9
score: 38.9
NoneNo IPR availablePANTHERPTHR44089:SF4SUBFAMILY NOT NAMEDcoord: 1..136
NoneNo IPR availablePANTHERPTHR44089FAMILY NOT NAMEDcoord: 1..136
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 82..94
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 33..45
IPR011992EF-hand domain pairSUPERFAMILYSSF47473EF-handcoord: 22..105

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C018877.2Watermelon (97103) v2medwmbB164
MELO3C018877.2Wax gourdmedwgoB212
MELO3C018877.2Wax gourdmedwgoB236
MELO3C018877.2Cucumber (Gy14) v2cgybmedB085
MELO3C018877.2Cucumber (Gy14) v2cgybmedB464
MELO3C018877.2Cucumber (Gy14) v2cgybmedB465
MELO3C018877.2Cucumber (Gy14) v1cgymedB321
MELO3C018877.2Cucumber (Gy14) v1cgymedB322
MELO3C018877.2Cucurbita maxima (Rimu)cmamedB102
MELO3C018877.2Cucurbita maxima (Rimu)cmamedB534
MELO3C018877.2Cucurbita moschata (Rifu)cmomedB096
MELO3C018877.2Cucurbita moschata (Rifu)cmomedB521
MELO3C018877.2Cucurbita pepo (Zucchini)cpemedB261
MELO3C018877.2Cucurbita pepo (Zucchini)cpemedB317
MELO3C018877.2Cucurbita pepo (Zucchini)cpemedB721
MELO3C018877.2Wild cucumber (PI 183967)cpimedB097
MELO3C018877.2Wild cucumber (PI 183967)cpimedB521
MELO3C018877.2Wild cucumber (PI 183967)cpimedB523
MELO3C018877.2Cucumber (Chinese Long) v2cumedB097
MELO3C018877.2Cucumber (Chinese Long) v2cumedB509
MELO3C018877.2Bottle gourd (USVL1VR-Ls)lsimedB067
MELO3C018877.2Bottle gourd (USVL1VR-Ls)lsimedB101
MELO3C018877.2Watermelon (Charleston Gray)medwcgB190
MELO3C018877.2Watermelon (97103) v1medwmB233
MELO3C018877.2Silver-seed gourdcarmedB0204
MELO3C018877.2Silver-seed gourdcarmedB1047
MELO3C018877.2Cucumber (Chinese Long) v3cucmedB100
MELO3C018877.2Cucumber (Chinese Long) v3cucmedB535
MELO3C018877.2Cucumber (Chinese Long) v3cucmedB536