MELO3C018837.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C018837.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionCLAVATA3/ESR (CLE)-related protein 20
Locationchr01 : 3226940 .. 3227155 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTCATTTCCACCTCCGTCTTCTCCTCGCCATTTTTCTTCTTCTTCTAACTCCCACTACAACCGCCACCGCCGCCTTCCAACCAAGGATTCCGATGAGAAAGCAAGTCATTTTCCGGCCGTCTTCACCCTCAGTAGTTCACAAATCTACAGACTTTGAAGATCAAAAGCGAAGAGTCCCCACCGGATCAAACCCTTTACACAACAAACGGTGA

mRNA sequence

ATGACTCATTTCCACCTCCGTCTTCTCCTCGCCATTTTTCTTCTTCTTCTAACTCCCACTACAACCGCCACCGCCGCCTTCCAACCAAGGATTCCGATGAGAAAGCAAGTCATTTTCCGGCCGTCTTCACCCTCAGTAGTTCACAAATCTACAGACTTTGAAGATCAAAAGCGAAGAGTCCCCACCGGATCAAACCCTTTACACAACAAACGGTGA

Coding sequence (CDS)

ATGACTCATTTCCACCTCCGTCTTCTCCTCGCCATTTTTCTTCTTCTTCTAACTCCCACTACAACCGCCACCGCCGCCTTCCAACCAAGGATTCCGATGAGAAAGCAAGTCATTTTCCGGCCGTCTTCACCCTCAGTAGTTCACAAATCTACAGACTTTGAAGATCAAAAGCGAAGAGTCCCCACCGGATCAAACCCTTTACACAACAAACGGTGA

Protein sequence

MTHFHLRLLLAIFLLLLTPTTTATAAFQPRIPMRKQVIFRPSSPSVVHKSTDFEDQKRRVPTGSNPLHNKR
Homology
The following BLAST results are available for this feature:
BLAST of MELO3C018837.2 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C018837.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C018837.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C018837.2 vs. TrEMBL
Match NameE-valueIdentityDescription
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045168 cell-cell signaling involved in cell fate commitment
biological_process GO:0030154 cell differentiation
biological_process GO:0007275 multicellular organism development
biological_process GO:0008150 biological_process
cellular_component GO:0048046 apoplast
cellular_component GO:0005576 extracellular region
cellular_component GO:0005615 extracellular space
cellular_component GO:0005575 cellular_component
molecular_function GO:0033612 receptor serine/threonine kinase binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C018837.2.1MELO3C018837.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 42..71

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C018837.2Cucsa.148760Cucumber (Gy14) v1cgymedB246
MELO3C018837.2CmaCh11G018090Cucurbita maxima (Rimu)cmamedB107
MELO3C018837.2CmoCh19G009310Cucurbita moschata (Rifu)cmomedB521
MELO3C018837.2Lsi11G014290Bottle gourd (USVL1VR-Ls)lsimedB101
MELO3C018837.2ClCG02G002130Watermelon (Charleston Gray)medwcgB190
MELO3C018837.2Cla97C02G028530Watermelon (97103) v2medwmbB164
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C018837.2Cucumber (Gy14) v2cgybmedB085
MELO3C018837.2Cucumber (Gy14) v2cgybmedB403
MELO3C018837.2Cucumber (Gy14) v2cgybmedB465
MELO3C018837.2Cucumber (Gy14) v1cgymedB020
MELO3C018837.2Cucurbita maxima (Rimu)cmamedB534
MELO3C018837.2Cucurbita maxima (Rimu)cmamedB590
MELO3C018837.2Cucurbita maxima (Rimu)cmamedB884
MELO3C018837.2Cucurbita moschata (Rifu)cmomedB096
MELO3C018837.2Cucurbita moschata (Rifu)cmomedB577
MELO3C018837.2Cucurbita moschata (Rifu)cmomedB670
MELO3C018837.2Cucurbita pepo (Zucchini)cpemedB261
MELO3C018837.2Cucurbita pepo (Zucchini)cpemedB317
MELO3C018837.2Cucurbita pepo (Zucchini)cpemedB721
MELO3C018837.2Wild cucumber (PI 183967)cpimedB097
MELO3C018837.2Wild cucumber (PI 183967)cpimedB454
MELO3C018837.2Wild cucumber (PI 183967)cpimedB523
MELO3C018837.2Cucumber (Chinese Long) v2cumedB097
MELO3C018837.2Cucumber (Chinese Long) v2cumedB446
MELO3C018837.2Cucumber (Chinese Long) v2cumedB509
MELO3C018837.2Melon (DHL92) v3.6.1medmedB040
MELO3C018837.2Melon (DHL92) v3.6.1medmedB099
MELO3C018837.2Bottle gourd (USVL1VR-Ls)lsimedB067
MELO3C018837.2Watermelon (Charleston Gray)medwcgB189
MELO3C018837.2Watermelon (97103) v1medwmB230
MELO3C018837.2Watermelon (97103) v1medwmB233
MELO3C018837.2Watermelon (97103) v1medwmB240
MELO3C018837.2Silver-seed gourdcarmedB0315
MELO3C018837.2Silver-seed gourdcarmedB0351
MELO3C018837.2Silver-seed gourdcarmedB0650
MELO3C018837.2Silver-seed gourdcarmedB0874
MELO3C018837.2Cucumber (Chinese Long) v3cucmedB100
MELO3C018837.2Cucumber (Chinese Long) v3cucmedB463
MELO3C018837.2Cucumber (Chinese Long) v3cucmedB536
MELO3C018837.2Watermelon (97103) v2medwmbB157
MELO3C018837.2Wax gourdmedwgoB212
MELO3C018837.2Wax gourdmedwgoB236
MELO3C018837.2Wax gourdmedwgoB237