MELO3C018736.2 (gene) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTTTAACGTTTCTTAAATTAATAATACTAATAATAATAATCGAAATCCATTTCTATAAGGTTTATATAGAAAACAAATCAATCCATGGAAGTTCATTTCCCGGAAAAAGCCGCAAGCAGAAATTTTCTTTCTCGATAACTTCATTAAAAAACAAAAGAGAAGAGAAAAAAAAAAAAAAAGAAATCCTCTTCCTCTCTTTTTCTTTTGTCTTCCTTCCAATCGGACCCTATTCCTTTTCTTTTTTTTTTTTTGATTTTCTACTGCGATCCATGGCGTCTGGTTCAACTGGTCGGCCTAATTCGGGTTCTAAAGGGTTTGATTTTGGTACTGATGATGTTCTTTGTTCTTATGAGGATTATGGTAACCAAGAATCTTCTAACGGTAGCCATAGCGATCTGTCCGTTGCGAATTCTAGTAAGGTAAGGTTGGTTTCTTATGTTGATGCGGTTGTTTGGTTGGTCTTCTTTTCTGGTGTGGGTTGGGTGTTTGAGAGAAATTTTGAGGTTTGGAATTTGTTGGGTGCTCGATTAGGGTTTTGGATTGTTGAATTTATCCCCTTTTTGGTTTGTCTATTCGAGGGGGATGGTTATTGATATTGGGTTGTGTTATGAAATCACTGTTTGAGGCTTGGGATAAAGATCCGTGCTGTGTCCTTTTGGGATTGTAATGATGTAGGTCCTGTTTGATATATCCGTTTTGATTTTTGTTTTATGAAAATTAAGCTAATGAAAATTACTTCTATCTATTAGTTTCTTTGTGTGGTTGTATGCTTTTTAGTAGGAGTGTTTTCAAAATCCAAGCTAAGTTTTGAATACTAAACGAAGTAGTTTTTTAAAATCTTGTTTTTGTTGTTGACATTTGGCTGAGAATTCAATATTTACTTATGAAAAAGATAAAAACTATGGTTAAGAAGTTGTGAGAAAACAAGGAAAGTTTGTTTAGAAACAAAATGGCTATCAAATGGGGTTATAATGCTTTTAATTATTGGTTTAACTTTGTGTATTACGGTTGAGTCAATTCATTTTGAAATAACTTGGAATTTGTTACTGTAAGTCAATATTCTTGGTACTTTCCAGTCTGCAGAATGGAAAAGAAAAAATTGTTCAATCTTGCTTGAGCTATTGAAAGTTTGGTCTTTACCAGCTTTTCCCCCCTAAGATTTTGAAATTTTCACTGAGAGCTTAGAAATTCTGTTATGAAGATTCTTGGTTTTCCATTCGATGTGAGAGTTGGATCTATATCTTGAAGAAGAGGACATTATCTTTTAGTTATGGTTTTTGGTATTTTAGTTTAACTGTACTGCGGTGTTACAAGTAATGTTTGTAAATTCTTAGGGCATGTGTTCTGGGTTTCAAGAGCTAACATAGAATAATTGTATATATTTTTGGTCTGACATCGAGTCTTGTTTTTTGATTTTGAAATTACAGAGGAAGAACACTCATAAGACTATTGGCTGCAATTATTATTTTCTCAGCTTCCGTGGAATCAAATGTTGTGTTGTCTTATTGTATTATGTTTTTTTATTTGTCCGTTCATCAATTTTATTAACTGAGTTTTATGTCTTATTCATGAATAGTGTTTTCGGTGTGTAATATTGCATGAATAATTGAGTTTTGAGTATTTGTTTGAGCAGGATTTTCATAAAAGTAGAATGTCTACTGTATATCCTGCTGCTGCATATGGTCAATCAGAAGATTCCATCAAACAAGATGTGATTTCTACTGTCGAGAACAGCATGAAGAAGTATTCTGATAATATTTTGCGTTTTCTGGAGGGAATAAGTTCACGCCTATCACAACTTGAACTGAATTGCTACAACCTTGATAAATCTGTTGGAGAAATGCGATCTGATGTACTTCGTGACCATGAAGAGGAAGATCTGAAGCTTAAATCTCTGGAGAAGCATCTACAAGAGGTAACTATATCTTCTAGAACTTAAATAGTAACCTTTTTTTAATTTATTTATTGATATCATATGATCATTTGTAGACACAAGGCATTGCTGCGATCATGTAGAAATGTTAAATTAGTTTGCAACTCAAACTTAACACTTGTCTGTTGAATCTGGAAATCACCTATTTGACGTGAACAGTGACTCCCCCTTAAGCCTCTTTTGCTATTGCCATTTTCATTTCGTTTAACTTGATACTGGTCCTGCCATCTAAGAGATAAACATTAGTTGAGATATGATTTCGAGTTGTCATCCATTGCTCTTAATTCAGTTGATTGGACTATTCTTTCCAAACTGTCGCCATAACATTTTACTTCATTGTACAAAAGACAGTCTTCCAAATTGTGTCCTCAGGGATTAAGATTATCCTTTATGTCCTTTTGTAGGTCCACAGGTCTGTGCAAATTATAAGAGACAAGCAGGAGCTTGCTGAGACTCAGAAAGACTTAGCCAAACTTCATCTTTTGCAGAAAGAGTCATCTTCATCCAGCCATTCACATTCAAATGATGAGAGAGCTTCACCAGTTGCCTCTGATCCTAAGAAGAACGAAAATCCGTCTGAGAATCTCAATAATCAGCAATTAGCTCTCGCCCTGCCACACCAGATTGTCCCGCACCAAAATCCTATCCCACCACCCCCTCCAGCAGCTTTGCCACAGAATGTGCCTCAACAGCAATCTTATTACATGGCTTCAAACCAATTGCCAAGTCAACCAACCCATATCCAGCATGCCCAGACCCAATATCAACAACTTCAAGATGTTTCTCGGTTGCCATCACACATGACTAATTCCCAGCTAAGTCAAACTCCACCACCACAACAATTCAATCAGTATCAACAACAATGGACGCCACTGCAGCAGCAGCAGCAGCCACCCCAACAGGTACAACCACCACAACAACAGCCTTCTATGCAACAACCTCAGATCAGGCCACCGCCTACTTCAGTCTACTCTTCTTATTCTATGAATCAACCGACTTCTATGCCAGAGACTCTTTCAAACAGCATGCCTATGCAGTTGTCATTTTCACCTATTCCTCAGCCGGGTTCAAGCCGTATAGACACTGTCCCATATGGATACGTTGGAAGTGGTGTTACTGTGTCCCAGCAACCTCCTCAAGTCAAAAATGCTTTTGTATCACAAGCTGGAGAAGGTTATTTACCTTCTGGACCGCAATCTGCACTTTCCTCGGGAGCTTCATATATGATGTACGATAGGGAAAGTGGAAGACCGCCACACCATCCTCCCCAACCTCAACAACCACCACACCATCCTCCCCAACCCCAACAATCACACTTCAACCAAAGTGGATACCCTCCAGCCAATGGATCTATTCAGATTTCTCAGCATCCATCGGGCCCCCACGTTGTCGCTAGGAATCCGAACCATCCGCATTATATGCGCAACCAAAACCAAAACCACCCTTATGGTGAAATAGTTGAGAAACTGGTCGGCATGGGTTTTAGGAGTGACCACGTTGCTAGTGTAATTCATAGAATGGAGGAGAGCGGCCAACCTGTTGACTTCAACGCTGTTCTAGATGGGTTGAGTAATTCCGGAGGTCCTCAGCGGGTATGGTGACGGTAATTTTAGTAGCAAAGTCGCCTGTTTGTTTGCACGTTGAAGCTTCGTATCGGCCATGACCAGCCTAGCCATTGCTACTTTTTAATGCATTGAATAAAAGACTGGTTTTTAGGATTCCATTGTGTTTTCCCTTCCCGTATATAATGTTATATGGTTTGCGAGATACAAAAGAAGTCGACTGTATTTCATGTTTAAAGTTTAAACGTTGTATGAATATCTTCTACCCTCATTCTCTAATCTTACCAGATGATTATCTCTTAATGTTCTTTCTACTTTTTGCATCAATGAACATCCATTTGTGGCTCTTGCTTGTTCCTTCGCTTTCTCCACAAAAAAAAAAAATTTTTTTAATAATAATAGAGTAAAATGTACGGATTTATACTTTGTGCA ATGTCTTTAACGTTTCTTAAATTAATAATACTAATAATAATAATCGAAATCCATTTCTATAAGGTTTATATAGAAAACAAATCAATCCATGGAAGTTCATTTCCCGGAAAAAGCCGCAAGCAGAAATTTTCTTTCTCGATAACTTCATTAAAAAACAAAAGAGAAGAGAAAAAAAAAAAAAAAGAAATCCTCTTCCTCTCTTTTTCTTTTGTCTTCCTTCCAATCGGACCCTATTCCTTTTCTTTTTTTTTTTTTGATTTTCTACTGCGATCCATGGCGTCTGGTTCAACTGGTCGGCCTAATTCGGGTTCTAAAGGGTTTGATTTTGGTACTGATGATGTTCTTTGTTCTTATGAGGATTATGGTAACCAAGAATCTTCTAACGGTAGCCATAGCGATCTGTCCGTTGCGAATTCTAGTAAGGATTTTCATAAAAGTAGAATGTCTACTGTATATCCTGCTGCTGCATATGGTCAATCAGAAGATTCCATCAAACAAGATGTGATTTCTACTGTCGAGAACAGCATGAAGAAGTATTCTGATAATATTTTGCGTTTTCTGGAGGGAATAAGTTCACGCCTATCACAACTTGAACTGAATTGCTACAACCTTGATAAATCTGTTGGAGAAATGCGATCTGATGTACTTCGTGACCATGAAGAGGAAGATCTGAAGCTTAAATCTCTGGAGAAGCATCTACAAGAGGTCCACAGGTCTGTGCAAATTATAAGAGACAAGCAGGAGCTTGCTGAGACTCAGAAAGACTTAGCCAAACTTCATCTTTTGCAGAAAGAGTCATCTTCATCCAGCCATTCACATTCAAATGATGAGAGAGCTTCACCAGTTGCCTCTGATCCTAAGAAGAACGAAAATCCGTCTGAGAATCTCAATAATCAGCAATTAGCTCTCGCCCTGCCACACCAGATTGTCCCGCACCAAAATCCTATCCCACCACCCCCTCCAGCAGCTTTGCCACAGAATGTGCCTCAACAGCAATCTTATTACATGGCTTCAAACCAATTGCCAAGTCAACCAACCCATATCCAGCATGCCCAGACCCAATATCAACAACTTCAAGATGTTTCTCGGTTGCCATCACACATGACTAATTCCCAGCTAAGTCAAACTCCACCACCACAACAATTCAATCAGTATCAACAACAATGGACGCCACTGCAGCAGCAGCAGCAGCCACCCCAACAGGTACAACCACCACAACAACAGCCTTCTATGCAACAACCTCAGATCAGGCCACCGCCTACTTCAGTCTACTCTTCTTATTCTATGAATCAACCGACTTCTATGCCAGAGACTCTTTCAAACAGCATGCCTATGCAGTTGTCATTTTCACCTATTCCTCAGCCGGGTTCAAGCCGTATAGACACTGTCCCATATGGATACGTTGGAAGTGGTGTTACTGTGTCCCAGCAACCTCCTCAAGTCAAAAATGCTTTTGTATCACAAGCTGGAGAAGGTTATTTACCTTCTGGACCGCAATCTGCACTTTCCTCGGGAGCTTCATATATGATGTACGATAGGGAAAGTGGAAGACCGCCACACCATCCTCCCCAACCTCAACAACCACCACACCATCCTCCCCAACCCCAACAATCACACTTCAACCAAAGTGGATACCCTCCAGCCAATGGATCTATTCAGATTTCTCAGCATCCATCGGGCCCCCACGTTGTCGCTAGGAATCCGAACCATCCGCATTATATGCGCAACCAAAACCAAAACCACCCTTATGGTGAAATAGTTGAGAAACTGGTCGGCATGGGTTTTAGGAGTGACCACGTTGCTAGTGTAATTCATAGAATGGAGGAGAGCGGCCAACCTGTTGACTTCAACGCTGTTCTAGATGGGTTGAGTAATTCCGGAGGTCCTCAGCGGGTATGGTGACGGTAATTTTAGTAGCAAAGTCGCCTGTTTGTTTGCACGTTGAAGCTTCGTATCGGCCATGACCAGCCTAGCCATTGCTACTTTTTAATGCATTGAATAAAAGACTGGTTTTTAGGATTCCATTGTGTTTTCCCTTCCCGTATATAATGTTATATGGTTTGCGAGATACAAAAGAAGTCGACTGTATTTCATGTTTAAAGTTTAAACGTTGTATGAATATCTTCTACCCTCATTCTCTAATCTTACCAGATGATTATCTCTTAATGTTCTTTCTACTTTTTGCATCAATGAACATCCATTTGTGGCTCTTGCTTGTTCCTTCGCTTTCTCCACAAAAAAAAAAAATTTTTTTAATAATAATAGAGTAAAATGTACGGATTTATACTTTGTGCA ATGTCTTTAACGTTTCTTAAATTAATAATACTAATAATAATAATCGAAATCCATTTCTATAAGGTTTATATAGAAAACAAATCAATCCATGGAAGTTCATTTCCCGGAAAAAGCCGCAAGCAGAAATTTTCTTTCTCGATAACTTCATTAAAAAACAAAAGAGAAGAGAAAAAAAAAAAAAAAGAAATCCTCTTCCTCTCTTTTTCTTTTGTCTTCCTTCCAATCGGACCCTATTCCTTTTCTTTTTTTTTTTTTGATTTTCTACTGCGATCCATGGCGTCTGGTTCAACTGGTCGGCCTAATTCGGGTTCTAAAGGGTTTGATTTTGGTACTGATGATGTTCTTTGTTCTTATGAGGATTATGGTAACCAAGAATCTTCTAACGGTAGCCATAGCGATCTGTCCGTTGCGAATTCTAGTAAGGATTTTCATAAAAGTAGAATGTCTACTGTATATCCTGCTGCTGCATATGGTCAATCAGAAGATTCCATCAAACAAGATGTGATTTCTACTGTCGAGAACAGCATGAAGAAGTATTCTGATAATATTTTGCGTTTTCTGGAGGGAATAAGTTCACGCCTATCACAACTTGAACTGAATTGCTACAACCTTGATAAATCTGTTGGAGAAATGCGATCTGATGTACTTCGTGACCATGAAGAGGAAGATCTGAAGCTTAAATCTCTGGAGAAGCATCTACAAGAGGTCCACAGGTCTGTGCAAATTATAAGAGACAAGCAGGAGCTTGCTGAGACTCAGAAAGACTTAGCCAAACTTCATCTTTTGCAGAAAGAGTCATCTTCATCCAGCCATTCACATTCAAATGATGAGAGAGCTTCACCAGTTGCCTCTGATCCTAAGAAGAACGAAAATCCGTCTGAGAATCTCAATAATCAGCAATTAGCTCTCGCCCTGCCACACCAGATTGTCCCGCACCAAAATCCTATCCCACCACCCCCTCCAGCAGCTTTGCCACAGAATGTGCCTCAACAGCAATCTTATTACATGGCTTCAAACCAATTGCCAAGTCAACCAACCCATATCCAGCATGCCCAGACCCAATATCAACAACTTCAAGATGTTTCTCGGTTGCCATCACACATGACTAATTCCCAGCTAAGTCAAACTCCACCACCACAACAATTCAATCAGTATCAACAACAATGGACGCCACTGCAGCAGCAGCAGCAGCCACCCCAACAGGTACAACCACCACAACAACAGCCTTCTATGCAACAACCTCAGATCAGGCCACCGCCTACTTCAGTCTACTCTTCTTATTCTATGAATCAACCGACTTCTATGCCAGAGACTCTTTCAAACAGCATGCCTATGCAGTTGTCATTTTCACCTATTCCTCAGCCGGGTTCAAGCCGTATAGACACTGTCCCATATGGATACGTTGGAAGTGGTGTTACTGTGTCCCAGCAACCTCCTCAAGTCAAAAATGCTTTTGTATCACAAGCTGGAGAAGGTTATTTACCTTCTGGACCGCAATCTGCACTTTCCTCGGGAGCTTCATATATGATGTACGATAGGGAAAGTGGAAGACCGCCACACCATCCTCCCCAACCTCAACAACCACCACACCATCCTCCCCAACCCCAACAATCACACTTCAACCAAAGTGGATACCCTCCAGCCAATGGATCTATTCAGATTTCTCAGCATCCATCGGGCCCCCACGTTGTCGCTAGGAATCCGAACCATCCGCATTATATGCGCAACCAAAACCAAAACCACCCTTATGGTGAAATAGTTGAGAAACTGGTCGGCATGGGTTTTAGGAGTGACCACGTTGCTAGTGTAATTCATAGAATGGAGGAGAGCGGCCAACCTGTTGACTTCAACGCTGTTCTAGATGGGTTGAGTAATTCCGGAGGTCCTCAGCGGGTATGGTGA MSLTFLKLIILIIIIEIHFYKVYIENKSIHGSSFPGKSRKQKFSFSITSLKNKREEKKKKKEILFLSFSFVFLPIGPYSFSFFFFDFLLRSMASGSTGRPNSGSKGFDFGTDDVLCSYEDYGNQESSNGSHSDLSVANSSKDFHKSRMSTVYPAAAYGQSEDSIKQDVISTVENSMKKYSDNILRFLEGISSRLSQLELNCYNLDKSVGEMRSDVLRDHEEEDLKLKSLEKHLQEVHRSVQIIRDKQELAETQKDLAKLHLLQKESSSSSHSHSNDERASPVASDPKKNENPSENLNNQQLALALPHQIVPHQNPIPPPPPAALPQNVPQQQSYYMASNQLPSQPTHIQHAQTQYQQLQDVSRLPSHMTNSQLSQTPPPQQFNQYQQQWTPLQQQQQPPQQVQPPQQQPSMQQPQIRPPPTSVYSSYSMNQPTSMPETLSNSMPMQLSFSPIPQPGSSRIDTVPYGYVGSGVTVSQQPPQVKNAFVSQAGEGYLPSGPQSALSSGASYMMYDRESGRPPHHPPQPQQPPHHPPQPQQSHFNQSGYPPANGSIQISQHPSGPHVVARNPNHPHYMRNQNQNHPYGEIVEKLVGMGFRSDHVASVIHRMEESGQPVDFNAVLDGLSNSGGPQRVW
BLAST of MELO3C018736.2 vs. NCBI nr
Match: XP_008455323.1 (PREDICTED: transcription factor SPT20 homolog [Cucumis melo]) HSP 1 Score: 852.8 bits (2202), Expect = 7.3e-244 Identity = 542/542 (100.00%), Postives = 542/542 (100.00%), Query Frame = 0
BLAST of MELO3C018736.2 vs. NCBI nr
Match: XP_004136823.1 (PREDICTED: trithorax group protein osa [Cucumis sativus] >KGN43615.1 Structural constituent of cell wall [Cucumis sativus]) HSP 1 Score: 798.1 bits (2060), Expect = 2.1e-227 Identity = 483/546 (88.46%), Postives = 487/546 (89.19%), Query Frame = 0
BLAST of MELO3C018736.2 vs. NCBI nr
Match: XP_022988741.1 (transcription factor SPT20 homolog isoform X2 [Cucurbita maxima]) HSP 1 Score: 661.0 bits (1704), Expect = 4.1e-186 Identity = 423/546 (77.47%), Postives = 450/546 (82.42%), Query Frame = 0
BLAST of MELO3C018736.2 vs. NCBI nr
Match: XP_022988740.1 (transcription factor SPT20 homolog isoform X1 [Cucurbita maxima]) HSP 1 Score: 656.4 bits (1692), Expect = 1.0e-184 Identity = 423/547 (77.33%), Postives = 450/547 (82.27%), Query Frame = 0
BLAST of MELO3C018736.2 vs. NCBI nr
Match: XP_022930705.1 (ataxin-2 homolog isoform X2 [Cucurbita moschata]) HSP 1 Score: 646.4 bits (1666), Expect = 1.0e-181 Identity = 416/544 (76.47%), Postives = 440/544 (80.88%), Query Frame = 0
BLAST of MELO3C018736.2 vs. TAIR10
Match: AT4G28300.1 (Protein of unknown function (DUF1421)) HSP 1 Score: 241.9 bits (616), Expect = 1.1e-63 Identity = 255/548 (46.53%), Postives = 307/548 (56.02%), Query Frame = 0
BLAST of MELO3C018736.2 vs. TAIR10
Match: AT5G14540.1 (Protein of unknown function (DUF1421)) HSP 1 Score: 73.2 bits (178), Expect = 6.6e-13 Identity = 47/154 (30.52%), Postives = 83/154 (53.90%), Query Frame = 0
HSP 2 Score: 46.2 bits (108), Expect = 8.6e-05 Identity = 19/44 (43.18%), Postives = 27/44 (61.36%), Query Frame = 0
BLAST of MELO3C018736.2 vs. TAIR10
Match: AT3G01560.1 (Protein of unknown function (DUF1421)) HSP 1 Score: 67.4 bits (163), Expect = 3.6e-11 Identity = 56/173 (32.37%), Postives = 93/173 (53.76%), Query Frame = 0
BLAST of MELO3C018736.2 vs. TrEMBL
Match: tr|A0A1S3C082|A0A1S3C082_CUCME (transcription factor SPT20 homolog OS=Cucumis melo OX=3656 GN=LOC103495514 PE=4 SV=1) HSP 1 Score: 852.8 bits (2202), Expect = 4.8e-244 Identity = 542/542 (100.00%), Postives = 542/542 (100.00%), Query Frame = 0
BLAST of MELO3C018736.2 vs. TrEMBL
Match: tr|A0A0A0K1T3|A0A0A0K1T3_CUCSA (Structural constituent of cell wall OS=Cucumis sativus OX=3659 GN=Csa_7G047990 PE=4 SV=1) HSP 1 Score: 798.1 bits (2060), Expect = 1.4e-227 Identity = 483/546 (88.46%), Postives = 487/546 (89.19%), Query Frame = 0
BLAST of MELO3C018736.2 vs. TrEMBL
Match: tr|A0A0A0K720|A0A0A0K720_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G048000 PE=4 SV=1) HSP 1 Score: 470.7 bits (1210), Expect = 5.2e-129 Identity = 331/556 (59.53%), Postives = 370/556 (66.55%), Query Frame = 0
BLAST of MELO3C018736.2 vs. TrEMBL
Match: tr|A0A1Q3BQX3|A0A1Q3BQX3_CEPFO (DUF1421 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_13919 PE=4 SV=1) HSP 1 Score: 470.7 bits (1210), Expect = 5.2e-129 Identity = 314/550 (57.09%), Postives = 378/550 (68.73%), Query Frame = 0
BLAST of MELO3C018736.2 vs. TrEMBL
Match: tr|B9RVZ9|B9RVZ9_RICCO (Structural constituent of cell wall, putative OS=Ricinus communis OX=3988 GN=RCOM_1174740 PE=4 SV=1) HSP 1 Score: 462.6 bits (1189), Expect = 1.4e-126 Identity = 326/558 (58.42%), Postives = 396/558 (70.97%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |