MELO3C018628 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C018628
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionRibulose bisphosphate carboxylase large chain
Locationchr1 : 1598304 .. 1598630 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAACTTTATTTGAAACTGGCACACACACCGATAATTGATTTTGCCAAAGATGATGAAAACGTGAATTCCCAACCATTTATGCATTGGAGAGACCATTTCCTATTTTGTGCGAAAGCTATTTTTAAATCACAGGCTGAAACAGGTGAAATCAAAGGACATTACTTGAATGCTACTGTAGATACATGCGAAAAAATGATGAAAAGAGCTATATTTGCCCGAGAATTGGGAGTTCCTATATGCATGACTACTAAACATGTAGATTCTTCACGAATAATTGGAACTTGGATATCTCACCTCCATGCTACAAAGAGTCTTGCTAATTAA

mRNA sequence

ATGAAACTTTATTTGAAACTGGCACACACACCGATAATTGATTTTGCCAAAGATGATGAAAACGTGAATTCCCAACCATTTATGCATTGGAGAGACCATTTCCTATTTTGTGCGAAAGCTATTTTTAAATCACAGGCTGAAACAGGTGAAATCAAAGGACATTACTTGAATGCTACTGTAGATACATGCGAAAAAATGATGAAAAGAGCTATATTTGCCCGAGAATTGGGAGTTCCTATATGCATGACTACTAAACATGTAGATTCTTCACGAATAATTGGAACTTGGATATCTCACCTCCATGCTACAAAGAGTCTTGCTAATTAA

Coding sequence (CDS)

ATGAAACTTTATTTGAAACTGGCACACACACCGATAATTGATTTTGCCAAAGATGATGAAAACGTGAATTCCCAACCATTTATGCATTGGAGAGACCATTTCCTATTTTGTGCGAAAGCTATTTTTAAATCACAGGCTGAAACAGGTGAAATCAAAGGACATTACTTGAATGCTACTGTAGATACATGCGAAAAAATGATGAAAAGAGCTATATTTGCCCGAGAATTGGGAGTTCCTATATGCATGACTACTAAACATGTAGATTCTTCACGAATAATTGGAACTTGGATATCTCACCTCCATGCTACAAAGAGTCTTGCTAATTAA

Protein sequence

MKLYLKLAHTPIIDFAKDDENVNSQPFMHWRDHFLFCAKAIFKSQAETGEIKGHYLNATVDTCEKMMKRAIFARELGVPICMTTKHVDSSRIIGTWISHLHATKSLAN*
Homology
[Close]
BLAST of MELO3C018628 vs. Swiss-Prot
Match: RBL_LACSA (Ribulose bisphosphate carboxylase large chain OS=Lactuca sativa GN=rbcL PE=3 SV=2)

HSP 1 Score: 131.3 bits (329), Expect = 6.2e-30
Identity = 61/70 (87.14%), Postives = 62/70 (88.57%), Query Frame = 1 

Query: 13  IDFAKDDENVNSQPFMHWRDHFLFCAKAIFKSQAETGEIKGHYLNATVDTCEKMMKRAIF 72
           +DF KDDENVNSQPFM WRD FLFCA+AIFKSQAETGEIKGHYLNAT  TCE+MMKRAIF
Sbjct: 197 LDFTKDDENVNSQPFMRWRDRFLFCAEAIFKSQAETGEIKGHYLNATAGTCEEMMKRAIF 256

Query: 73  ARELGVPICM 83
           ARELGVPI M
Sbjct: 257 ARELGVPIVM 266

[Close]
BLAST of MELO3C018628 vs. Swiss-Prot
Match: RBL_CICIN (Ribulose bisphosphate carboxylase large chain OS=Cichorium intybus GN=rbcL PE=3 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 6.2e-30
Identity = 61/70 (87.14%), Postives = 62/70 (88.57%), Query Frame = 1 

Query: 13  IDFAKDDENVNSQPFMHWRDHFLFCAKAIFKSQAETGEIKGHYLNATVDTCEKMMKRAIF 72
           +DF KDDENVNSQPFM WRD FLFCA+AIFKSQAETGEIKGHYLNAT  TCE+MMKRAIF
Sbjct: 197 LDFTKDDENVNSQPFMRWRDRFLFCAEAIFKSQAETGEIKGHYLNATAGTCEEMMKRAIF 256

Query: 73  ARELGVPICM 83
           ARELGVPI M
Sbjct: 257 ARELGVPIVM 266

[Close]
BLAST of MELO3C018628 vs. Swiss-Prot
Match: RBL_ANTHE (Ribulose bisphosphate carboxylase large chain (Fragment) OS=Anthospermum herbaceum GN=rbcL PE=3 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 6.2e-30
Identity = 61/70 (87.14%), Postives = 62/70 (88.57%), Query Frame = 1 

Query: 13  IDFAKDDENVNSQPFMHWRDHFLFCAKAIFKSQAETGEIKGHYLNATVDTCEKMMKRAIF 72
           +DF KDDENVNSQPFM WRD FLFCA+AIFKSQAETGEIKGHYLNAT  TCE+MMKRAIF
Sbjct: 188 LDFTKDDENVNSQPFMRWRDRFLFCAEAIFKSQAETGEIKGHYLNATAGTCEEMMKRAIF 247

Query: 73  ARELGVPICM 83
           ARELGVPI M
Sbjct: 248 ARELGVPIVM 257

[Close]
BLAST of MELO3C018628 vs. Swiss-Prot
Match: RBL_VITAE (Ribulose bisphosphate carboxylase large chain (Fragment) OS=Vitis aestivalis GN=rbcL PE=3 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 6.2e-30
Identity = 61/70 (87.14%), Postives = 62/70 (88.57%), Query Frame = 1 

Query: 13  IDFAKDDENVNSQPFMHWRDHFLFCAKAIFKSQAETGEIKGHYLNATVDTCEKMMKRAIF 72
           +DF KDDENVNSQPFM WRD FLFCA+AIFKSQAETGEIKGHYLNAT  TCE+MMKRAIF
Sbjct: 188 LDFTKDDENVNSQPFMRWRDRFLFCAEAIFKSQAETGEIKGHYLNATAGTCEEMMKRAIF 247

Query: 73  ARELGVPICM 83
           ARELGVPI M
Sbjct: 248 ARELGVPIVM 257

[Close]
BLAST of MELO3C018628 vs. Swiss-Prot
Match: RBL_SOYBN (Ribulose bisphosphate carboxylase large chain OS=Glycine max GN=rbcL PE=1 SV=3)

HSP 1 Score: 131.0 bits (328), Expect = 8.1e-30
Identity = 60/70 (85.71%), Postives = 62/70 (88.57%), Query Frame = 1 

Query: 13  IDFAKDDENVNSQPFMHWRDHFLFCAKAIFKSQAETGEIKGHYLNATVDTCEKMMKRAIF 72
           +DF KDDENVNSQPFM WRD FLFCA+AIFKSQAETGEIKGHYLNAT  TCE+MMKRA+F
Sbjct: 197 LDFTKDDENVNSQPFMRWRDRFLFCAEAIFKSQAETGEIKGHYLNATAGTCEEMMKRAVF 256

Query: 73  ARELGVPICM 83
           ARELGVPI M
Sbjct: 257 ARELGVPIVM 266

[Close]
BLAST of MELO3C018628 vs. TrEMBL
Match: A0A0Q3IYU1_BRADI (Uncharacterized protein OS=Brachypodium distachyon GN=BRADI_2g20990 PE=3 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 3.1e-28
Identity = 62/87 (71.26%), Postives = 73/87 (83.91%), Query Frame = 1 

Query: 13  IDFAKDDENVNSQPFMHWRDHFLFCAKAIFKSQAETGEIKGHYLNATVDTCEKMMKRAIF 72
           +DF KDDENVNSQPFM WRDHF+FCA+AI+KSQAETGEIKGHYLNATV TCE+MMKRA+F
Sbjct: 181 LDFTKDDENVNSQPFMRWRDHFVFCAEAIYKSQAETGEIKGHYLNATVGTCEEMMKRAVF 240

Query: 73  ARELGVPICMTTKHVDSSRIIGTWISH 100
           ARELGVPI +T  ++       T ++H
Sbjct: 241 ARELGVPI-VTHDYLTGGFTANTTLAH 266

[Close]
BLAST of MELO3C018628 vs. TrEMBL
Match: I1HI11_BRADI (Uncharacterized protein OS=Brachypodium distachyon PE=3 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 3.1e-28
Identity = 62/87 (71.26%), Postives = 73/87 (83.91%), Query Frame = 1 

Query: 13  IDFAKDDENVNSQPFMHWRDHFLFCAKAIFKSQAETGEIKGHYLNATVDTCEKMMKRAIF 72
           +DF KDDENVNSQPFM WRDHF+FCA+AI+KSQAETGEIKGHYLNATV TCE+MMKRA+F
Sbjct: 178 LDFTKDDENVNSQPFMRWRDHFVFCAEAIYKSQAETGEIKGHYLNATVGTCEEMMKRAVF 237

Query: 73  ARELGVPICMTTKHVDSSRIIGTWISH 100
           ARELGVPI +T  ++       T ++H
Sbjct: 238 ARELGVPI-VTHDYLTGGFTANTTLAH 263

[Close]
BLAST of MELO3C018628 vs. TrEMBL
Match: A7BG78_9ROSI (Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (Fragment) OS=Argomuellera macrophylla GN=rbcL PE=3 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 4.1e-28
Identity = 59/70 (84.29%), Postives = 65/70 (92.86%), Query Frame = 1 

Query: 13  IDFAKDDENVNSQPFMHWRDHFLFCAKAIFKSQAETGEIKGHYLNATVDTCEKMMKRAIF 72
           +DF KDDENVNSQPFMHWRD FLFCA+AI+K+QAETGEIKGHYLNAT  TCE+MMKRA+F
Sbjct: 188 VDFTKDDENVNSQPFMHWRDRFLFCAEAIYKAQAETGEIKGHYLNATAGTCEEMMKRAVF 247

Query: 73  ARELGVPICM 83
           ARELGVPI M
Sbjct: 248 ARELGVPIIM 257

[Close]
BLAST of MELO3C018628 vs. TrEMBL
Match: A7BGB7_9ROSI (Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (Fragment) OS=Adenopeltis serrata GN=rbcL PE=3 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 4.1e-28
Identity = 59/70 (84.29%), Postives = 65/70 (92.86%), Query Frame = 1 

Query: 13  IDFAKDDENVNSQPFMHWRDHFLFCAKAIFKSQAETGEIKGHYLNATVDTCEKMMKRAIF 72
           +DF KDDENVNSQPFMHWRD FLFCA+A+FK+QAETGEIKGHYLNAT  TCE+MMKRA+F
Sbjct: 188 LDFTKDDENVNSQPFMHWRDRFLFCAEALFKAQAETGEIKGHYLNATAGTCEEMMKRAVF 247

Query: 73  ARELGVPICM 83
           ARELGVPI M
Sbjct: 248 ARELGVPIVM 257

[Close]
BLAST of MELO3C018628 vs. TrEMBL
Match: G0KVP3_RAUVE (Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (Fragment) OS=Rauvolfia verticillata GN=rbcL PE=3 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 5.3e-28
Identity = 61/70 (87.14%), Postives = 65/70 (92.86%), Query Frame = 1 

Query: 13  IDFAKDDENVNSQPFMHWRDHFLFCAKAIFKSQAETGEIKGHYLNATVDTCEKMMKRAIF 72
           +DFAKDDENVNSQPFM WRD FLFCA+AI+KSQAETGEIKGHYLNAT  TCE+MMKRAIF
Sbjct: 188 LDFAKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETGEIKGHYLNATAGTCEEMMKRAIF 247

Query: 73  ARELGVPICM 83
           ARELGVPI M
Sbjct: 248 ARELGVPIVM 257

[Close]
BLAST of MELO3C018628 vs. TAIR10
Match: ATCG00490.1 (ATCG00490.1 ribulose-bisphosphate carboxylases)

HSP 1 Score: 128.3 bits (321), Expect = 3.0e-30
Identity = 58/70 (82.86%), Postives = 62/70 (88.57%), Query Frame = 1 

Query: 13  IDFAKDDENVNSQPFMHWRDHFLFCAKAIFKSQAETGEIKGHYLNATVDTCEKMMKRAIF 72
           +DF KDDENVNSQPFM WRD FLFCA+AI+KSQAETGEIKGHYLNAT  TCE+M+KRA+F
Sbjct: 197 LDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETGEIKGHYLNATAGTCEEMIKRAVF 256

Query: 73  ARELGVPICM 83
           ARELGVPI M
Sbjct: 257 ARELGVPIVM 266

[Close]
BLAST of MELO3C018628 vs. TAIR10
Match: ATMG00280.1 (ATMG00280.1 Ribulose bisphosphate carboxylase large chain, catalytic domain)

HSP 1 Score: 120.9 bits (302), Expect = 4.8e-28
Identity = 54/68 (79.41%), Postives = 59/68 (86.76%), Query Frame = 1 

Query: 15 FAKDDENVNSQPFMHWRDHFLFCAKAIFKSQAETGEIKGHYLNATVDTCEKMMKRAIFAR 74
          F KDDENVNSQPFM WRD FLFCA+A++K+QAETG IKGHYLNAT  TCE+M+KRA+FAR
Sbjct: 31 FTKDDENVNSQPFMRWRDRFLFCAEAVYKAQAETGGIKGHYLNATAGTCEEMIKRAVFAR 90

Query: 75 ELGVPICM 83
          ELGVPI M
Sbjct: 91 ELGVPIVM 98

[Close]
BLAST of MELO3C018628 vs. TAIR10
Match: AT2G07732.1 (AT2G07732.1 Ribulose bisphosphate carboxylase large chain, catalytic domain)

HSP 1 Score: 120.2 bits (300), Expect = 8.1e-28
Identity = 54/68 (79.41%), Postives = 59/68 (86.76%), Query Frame = 1 

Query: 15 FAKDDENVNSQPFMHWRDHFLFCAKAIFKSQAETGEIKGHYLNATVDTCEKMMKRAIFAR 74
          F KDDENVNSQPFM WRD FLFCA+A++K+QAETG IKGHYLNAT  TCE+M+KRA+FAR
Sbjct: 31 FTKDDENVNSQPFMRWRDRFLFCAEAVYKAQAETGGIKGHYLNATPGTCEEMIKRAVFAR 90

Query: 75 ELGVPICM 83
          ELGVPI M
Sbjct: 91 ELGVPIVM 98

[Close]
BLAST of MELO3C018628 vs. NCBI nr
Match: gi|944070096|gb|KQK05580.1| (hypothetical protein BRADI_2g20990 [Brachypodium distachyon])

HSP 1 Score: 132.5 bits (332), Expect = 4.5e-28
Identity = 62/87 (71.26%), Postives = 73/87 (83.91%), Query Frame = 1 

Query: 13  IDFAKDDENVNSQPFMHWRDHFLFCAKAIFKSQAETGEIKGHYLNATVDTCEKMMKRAIF 72
           +DF KDDENVNSQPFM WRDHF+FCA+AI+KSQAETGEIKGHYLNATV TCE+MMKRA+F
Sbjct: 181 LDFTKDDENVNSQPFMRWRDHFVFCAEAIYKSQAETGEIKGHYLNATVGTCEEMMKRAVF 240

Query: 73  ARELGVPICMTTKHVDSSRIIGTWISH 100
           ARELGVPI +T  ++       T ++H
Sbjct: 241 ARELGVPI-VTHDYLTGGFTANTTLAH 266

[Close]
BLAST of MELO3C018628 vs. NCBI nr
Match: gi|155029203|dbj|BAF75476.1| (ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Argomuellera macrophylla])

HSP 1 Score: 132.1 bits (331), Expect = 5.8e-28
Identity = 59/70 (84.29%), Postives = 65/70 (92.86%), Query Frame = 1 

Query: 13  IDFAKDDENVNSQPFMHWRDHFLFCAKAIFKSQAETGEIKGHYLNATVDTCEKMMKRAIF 72
           +DF KDDENVNSQPFMHWRD FLFCA+AI+K+QAETGEIKGHYLNAT  TCE+MMKRA+F
Sbjct: 188 VDFTKDDENVNSQPFMHWRDRFLFCAEAIYKAQAETGEIKGHYLNATAGTCEEMMKRAVF 247

Query: 73  ARELGVPICM 83
           ARELGVPI M
Sbjct: 248 ARELGVPIIM 257

[Close]
BLAST of MELO3C018628 vs. NCBI nr
Match: gi|155029275|dbj|BAF75515.1| (ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Adenopeltis serrata])

HSP 1 Score: 132.1 bits (331), Expect = 5.8e-28
Identity = 59/70 (84.29%), Postives = 65/70 (92.86%), Query Frame = 1 

Query: 13  IDFAKDDENVNSQPFMHWRDHFLFCAKAIFKSQAETGEIKGHYLNATVDTCEKMMKRAIF 72
           +DF KDDENVNSQPFMHWRD FLFCA+A+FK+QAETGEIKGHYLNAT  TCE+MMKRA+F
Sbjct: 188 LDFTKDDENVNSQPFMHWRDRFLFCAEALFKAQAETGEIKGHYLNATAGTCEEMMKRAVF 247

Query: 73  ARELGVPICM 83
           ARELGVPI M
Sbjct: 248 ARELGVPIVM 257

[Close]
BLAST of MELO3C018628 vs. NCBI nr
Match: gi|218854213|gb|ACL12038.1| (ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial (chloroplast) [Rauvolfia verticillata])

HSP 1 Score: 131.7 bits (330), Expect = 7.6e-28
Identity = 61/70 (87.14%), Postives = 65/70 (92.86%), Query Frame = 1 

Query: 13  IDFAKDDENVNSQPFMHWRDHFLFCAKAIFKSQAETGEIKGHYLNATVDTCEKMMKRAIF 72
           +DFAKDDENVNSQPFM WRD FLFCA+AI+KSQAETGEIKGHYLNAT  TCE+MMKRAIF
Sbjct: 188 LDFAKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETGEIKGHYLNATAGTCEEMMKRAIF 247

Query: 73  ARELGVPICM 83
           ARELGVPI M
Sbjct: 248 ARELGVPIVM 257

[Close]
BLAST of MELO3C018628 vs. NCBI nr
Match: gi|387392239|gb|AFJ75855.1| (ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial (chloroplast) [Isatis multicaulis])

HSP 1 Score: 131.3 bits (329), Expect = 1.0e-27
Identity = 59/70 (84.29%), Postives = 65/70 (92.86%), Query Frame = 1 

Query: 13  IDFAKDDENVNSQPFMHWRDHFLFCAKAIFKSQAETGEIKGHYLNATVDTCEKMMKRAIF 72
           +DF KDDENVNSQPFM WRDHFLFCA+AI+KSQAETGEIKGHYLNAT  TCE+M+KRA+F
Sbjct: 160 LDFTKDDENVNSQPFMRWRDHFLFCAEAIYKSQAETGEIKGHYLNATAGTCEEMIKRAVF 219

Query: 73  ARELGVPICM 83
           ARELGVPI M
Sbjct: 220 ARELGVPIVM 229

The following BLAST results are available for this feature:
BLAST of MELO3C018628 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RBL_LACSA6.2e-3087.14Ribulose bisphosphate carboxylase large chain OS=Lactuca sativa GN=rbcL PE=3 SV=... [more]
RBL_CICIN6.2e-3087.14Ribulose bisphosphate carboxylase large chain OS=Cichorium intybus GN=rbcL PE=3 ... [more]
RBL_ANTHE6.2e-3087.14Ribulose bisphosphate carboxylase large chain (Fragment) OS=Anthospermum herbace... [more]
RBL_VITAE6.2e-3087.14Ribulose bisphosphate carboxylase large chain (Fragment) OS=Vitis aestivalis GN=... [more]
RBL_SOYBN8.1e-3085.71Ribulose bisphosphate carboxylase large chain OS=Glycine max GN=rbcL PE=1 SV=3[more]
BLAST of MELO3C018628 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0Q3IYU1_BRADI3.1e-2871.26Uncharacterized protein OS=Brachypodium distachyon GN=BRADI_2g20990 PE=3 SV=1[more]
I1HI11_BRADI3.1e-2871.26Uncharacterized protein OS=Brachypodium distachyon PE=3 SV=1[more]
A7BG78_9ROSI4.1e-2884.29Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (Fragment) OS=Argo... [more]
A7BGB7_9ROSI4.1e-2884.29Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (Fragment) OS=Aden... [more]
G0KVP3_RAUVE5.3e-2887.14Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (Fragment) OS=Rauv... [more]
BLAST of MELO3C018628 vs. TAIR10
Match NameE-valueIdentityDescription
ATCG00490.13.0e-3082.86ATCG00490.1 ribulose-bisphosphate carboxylases[more]
ATMG00280.14.8e-2879.41ATMG00280.1 Ribulose bisphosphate carboxylase large chain, catalytic domain[more]
AT2G07732.18.1e-2879.41 Ribulose bisphosphate carboxylase large chain, catalytic domain[more]
BLAST of MELO3C018628 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|944070096|gb|KQK05580.1|4.5e-2871.26hypothetical protein BRADI_2g20990 [Brachypodium distachyon][more]
gi|155029203|dbj|BAF75476.1|5.8e-2884.29ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Argomuellera macr... [more]
gi|155029275|dbj|BAF75515.1|5.8e-2884.29ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Adenopeltis serra... [more]
gi|218854213|gb|ACL12038.1|7.6e-2887.14ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial (chloropl... [more]
gi|387392239|gb|AFJ75855.1|1.0e-2784.29ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial (chloropl... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000685RuBisCO_lsu_C
Vocabulary: Molecular Function
TermDefinition
GO:0000287magnesium ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0046487 glyoxylate metabolic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0019253 reductive pentose-phosphate cycle
cellular_component GO:0009573 chloroplast ribulose bisphosphate carboxylase complex
molecular_function GO:0000287 magnesium ion binding
molecular_function GO:0004497 monooxygenase activity
molecular_function GO:0016984 ribulose-bisphosphate carboxylase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C018628T1MELO3C018628T1mRNA


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000685Ribulose bisphosphate carboxylase, large subunit, C-terminalGENE3DG3DSA:3.20.20.110coord: 13..84
score: 7.2
IPR000685Ribulose bisphosphate carboxylase, large subunit, C-terminalPFAMPF00016RuBisCO_largecoord: 13..84
score: 7.8
IPR000685Ribulose bisphosphate carboxylase, large subunit, C-terminalunknownSSF51649RuBisCo, C-terminal domaincoord: 13..87
score: 1.44
NoneNo IPR availablePANTHERPTHR23321RIBOSOMAL PROTEIN S15, BACTERIAL AND ORGANELLARcoord: 13..82
score: 3.3
NoneNo IPR availablePANTHERPTHR23321:SF33SUBFAMILY NOT NAMEDcoord: 13..82
score: 3.3

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C018628Cucumber (Chinese Long) v3cucmeB548
MELO3C018628Watermelon (97103) v2mewmbB224
MELO3C018628Wax gourdmewgoB220
MELO3C018628Cucumber (Gy14) v1cgymeB379
MELO3C018628Cucurbita maxima (Rimu)cmameB098
MELO3C018628Cucurbita maxima (Rimu)cmameB455
MELO3C018628Cucurbita moschata (Rifu)cmomeB085
MELO3C018628Cucurbita moschata (Rifu)cmomeB446
MELO3C018628Wild cucumber (PI 183967)cpimeB538
MELO3C018628Cucumber (Chinese Long) v2cumeB530
MELO3C018628Watermelon (Charleston Gray)mewcgB176
MELO3C018628Watermelon (97103) v1mewmB207
MELO3C018628Cucurbita pepo (Zucchini)cpemeB604
MELO3C018628Bottle gourd (USVL1VR-Ls)lsimeB247
MELO3C018628Cucumber (Gy14) v2cgybmeB468
MELO3C018628Silver-seed gourdcarmeB0375