MELO3C018580.2 (gene) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCAATGGCAACACACACCACAAAATTTTCAATACCATCAAATATCAACTAAAGATCACAAGAAAATGACACTTGGTATTGGTGGAAGAATTGGTATTGGCTTTGGTCTTCCTGGCTTCAATATATCGATCGGCGGAGGCATTGGTATCGGAGGTAGAAAGGGTGGGTGCAAGAGTCACAATCCTTCGAAAAAATGGATTCAACTTCACAATGTGAAGGCTCCTGATGTTTTAGAAGCTGCTAAGTTTGCAGTGGATGCGTTCAACAAAAAATATGAAAATAATCTTGAGTTTCAATACGTTACGGAAGCTTGGGTTCATGAAGTTAATAACGAAAAAGAGTATAGTATTGAATTAGTAGCAAAAGACTGTTTTCATCGTCTCCTCGAGTTTCATGCTGTCGTGATTGAAAAAACCGTTGATCATAAGAAGATTTGGATTCTTGTGTCTTTCGAACGAATCTTCGACTAAAAGAGAAAAGTTATATATATGTATAATCAAAAGTTTATACTTATATATATGTGTGAGATCTACACAATAATAAATCTTATATGATACTGTAGTATGTCGATCTCTACTTTCTTTCACTACTATATGTATTATGAAATAATCGAGACCGAACTAAGTTTTTAGTCCTGAGCCTATATTTTGTGTTTTAGTTTTCATTTTTGGTTTGTTGCACTTTTAAAGTTTGATCTAGACTAATGTTGCAGTTTTGTGTTTG GCAATGGCAACACACACCACAAAATTTTCAATACCATCAAATATCAACTAAAGATCACAAGAAAATGACACTTGGTATTGGTGGAAGAATTGGTATTGGCTTTGGTCTTCCTGGCTTCAATATATCGATCGGCGGAGGCATTGGTATCGGAGGTAGAAAGGGTGGGTGCAAGAGTCACAATCCTTCGAAAAAATGGATTCAACTTCACAATGTGAAGGCTCCTGATGTTTTAGAAGCTGCTAAGTTTGCAGTGGATGCGTTCAACAAAAAATATGAAAATAATCTTGAGTTTCAATACGTTACGGAAGCTTGGGTTCATGAAGTTAATAACGAAAAAGAGTATAGTATTGAATTAGTAGCAAAAGACTGTTTTCATCGTCTCCTCGAGTTTCATGCTGTCGTGATTGAAAAAACCGTTGATCATAAGAAGATTTGGATTCTTGTGTCTTTCGAACGAATCTTCGACTAAAAGAGAAAAGTTATATATATGTATAATCAAAAGTTTATACTTATATATATGTGTGAGATCTACACAATAATAAATCTTATATGATACTGTAGTATGTCGATCTCTACTTTCTTTCACTACTATATGTATTATGAAATAATCGAGACCGAACTAAGTTTTTAGTCCTGAGCCTATATTTTGTGTTTTAGTTTTCATTTTTGGTTTGTTGCACTTTTAAAGTTTGATCTAGACTAATGTTGCAGTTTTGTGTTTG ATGACACTTGGTATTGGTGGAAGAATTGGTATTGGCTTTGGTCTTCCTGGCTTCAATATATCGATCGGCGGAGGCATTGGTATCGGAGGTAGAAAGGGTGGGTGCAAGAGTCACAATCCTTCGAAAAAATGGATTCAACTTCACAATGTGAAGGCTCCTGATGTTTTAGAAGCTGCTAAGTTTGCAGTGGATGCGTTCAACAAAAAATATGAAAATAATCTTGAGTTTCAATACGTTACGGAAGCTTGGGTTCATGAAGTTAATAACGAAAAAGAGTATAGTATTGAATTAGTAGCAAAAGACTGTTTTCATCGTCTCCTCGAGTTTCATGCTGTCGTGATTGAAAAAACCGTTGATCATAAGAAGATTTGGATTCTTGTGTCTTTCGAACGAATCTTCGACTAA MTLGIGGRIGIGFGLPGFNISIGGGIGIGGRKGGCKSHNPSKKWIQLHNVKAPDVLEAAKFAVDAFNKKYENNLEFQYVTEAWVHEVNNEKEYSIELVAKDCFHRLLEFHAVVIEKTVDHKKIWILVSFERIFD
BLAST of MELO3C018580.2 vs. NCBI nr
Match: ADN34264.1 (phloem filament protein [Cucumis melo subsp. melo]) HSP 1 Score: 272.3 bits (695), Expect = 8.6e-70 Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0
BLAST of MELO3C018580.2 vs. NCBI nr
Match: ADN34263.1 (phloem filament protein [Cucumis melo subsp. melo]) HSP 1 Score: 161.4 bits (407), Expect = 2.2e-36 Identity = 86/135 (63.70%), Postives = 102/135 (75.56%), Query Frame = 0
BLAST of MELO3C018580.2 vs. NCBI nr
Match: XP_011658839.1 (PREDICTED: uncharacterized protein LOC105436097 [Cucumis sativus] >KGN43782.1 Phloem filament protein [Cucumis sativus]) HSP 1 Score: 114.8 bits (286), Expect = 2.3e-22 Identity = 72/128 (56.25%), Postives = 86/128 (67.19%), Query Frame = 0
BLAST of MELO3C018580.2 vs. NCBI nr
Match: XP_011658840.1 (PREDICTED: uncharacterized protein LOC105436098 [Cucumis sativus] >KGN43784.1 hypothetical protein Csa_7G067390 [Cucumis sativus]) HSP 1 Score: 104.0 bits (258), Expect = 4.1e-19 Identity = 60/105 (57.14%), Postives = 71/105 (67.62%), Query Frame = 0
BLAST of MELO3C018580.2 vs. NCBI nr
Match: XP_011658838.1 (PREDICTED: uncharacterized protein LOC105436096 [Cucumis sativus] >KGN43780.1 hypothetical protein Csa_7G067350 [Cucumis sativus]) HSP 1 Score: 94.0 bits (232), Expect = 4.2e-16 Identity = 64/137 (46.72%), Postives = 85/137 (62.04%), Query Frame = 0
BLAST of MELO3C018580.2 vs. TAIR10
Match: AT4G16500.1 (Cystatin/monellin superfamily protein) HSP 1 Score: 51.2 bits (121), Expect = 5.7e-07 Identity = 34/101 (33.66%), Postives = 51/101 (50.50%), Query Frame = 0
BLAST of MELO3C018580.2 vs. Swiss-Prot
Match: sp|Q84WT8|CYT4_ARATH (Cysteine proteinase inhibitor 4 OS=Arabidopsis thaliana OX=3702 GN=CYS4 PE=3 SV=2) HSP 1 Score: 51.2 bits (121), Expect = 1.0e-05 Identity = 34/101 (33.66%), Postives = 51/101 (50.50%), Query Frame = 0
BLAST of MELO3C018580.2 vs. TrEMBL
Match: tr|E5GCR6|E5GCR6_CUCME (Cysteine proteinase inhibitor OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1) HSP 1 Score: 272.3 bits (695), Expect = 5.7e-70 Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0
BLAST of MELO3C018580.2 vs. TrEMBL
Match: tr|E5GCR5|E5GCR5_CUCME (Cysteine proteinase inhibitor OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1) HSP 1 Score: 161.4 bits (407), Expect = 1.4e-36 Identity = 86/135 (63.70%), Postives = 102/135 (75.56%), Query Frame = 0
BLAST of MELO3C018580.2 vs. TrEMBL
Match: tr|A0A0A0K660|A0A0A0K660_CUCSA (Phloem filament protein OS=Cucumis sativus OX=3659 GN=Csa_7G067370 PE=4 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 1.5e-22 Identity = 72/128 (56.25%), Postives = 86/128 (67.19%), Query Frame = 0
BLAST of MELO3C018580.2 vs. TrEMBL
Match: tr|A0A0A0K477|A0A0A0K477_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G067390 PE=4 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 2.7e-19 Identity = 60/105 (57.14%), Postives = 71/105 (67.62%), Query Frame = 0
BLAST of MELO3C018580.2 vs. TrEMBL
Match: tr|A0A0A0K281|A0A0A0K281_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G067350 PE=4 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 2.8e-16 Identity = 64/137 (46.72%), Postives = 85/137 (62.04%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |