MELO3C018568 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C018568
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionRING/U-box superfamily protein, putative
Locationchr1 : 1147358 .. 1148142 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGAACAAAACCTCGATGCTTGTATGTCTGCAGGTTACTACATGGGTATGTCCTTAAGAATTACCGATCCCGACCTAAGGCATCGTCAACCACAAAGCCAAATTCAAACTCAACCTAACTCGCCAGCACTTGTCAAACAAATCGACCTGAACTTCAAACTTCAAGTCAAATGCCAACACTTTGGAGCAGGTGAAGAAGGCAGCACATTTGCAACAACTTTACTTAGTGAACACATAATCTCACAACCTACCTTTCCTGCTTTGCAACTTCCTATCTCCATCTTCAAGCGTGGTGATAAAACTTTGAAGCGATTACTTTTCCAGAAGTTTCAGATGTTTAGAGGCATCGTCAACGTTGAACTTGTGGTTGATGAAATAATAAAACATTGGATTAGAAAAGTTGAAGAAGATTTCAAGAGAATAATTCTAGGGTGTTTGCAGAGATTTATCCTCTGGAAATTAGGATAGAGTTGTTGGTTTGTCGAATGATTCCTGCAATAATAGACCAACCACAAGAAGTAATGATGGTTCCAACAAGCGACAATGCAATGGAGAGTATGCTAAAGAGAGTGGAGAACAACGAAGAACTAATGAAATTAGGTGACGACAGTATTGATTGTGTTATTTGCTTGGAGAAAATTGGTAAAGAGGAGAAAAGAAGTGGGAGGGTGGTGTTACAAATGCCATGTTTGCATATGTTTCATGAAGAATGTATAAGGAAGTGGTTGAAGACAAGTCATTTCTGTCCAACTTGTAGATTTTCAATGCCTATAAACAATTGA

mRNA sequence

ATGGCCGAACAAAACCTCGATGCTTGTATGTCTGCAGGTTACTACATGGGTATGTCCTTAAGAATTACCGATCCCGACCTAAGGCATCGTCAACCACAAAGCCAAATTCAAACTCAACCTAACTCGCCAGCACTTGTCAAACAAATCGACCTGAACTTCAAACTTCAAGTCAAATGCCAACACTTTGGAGCAGGTGAAGAAGGCAGCACATTTGCAACAACTTTACTTAGTGAACACATAATCTCACAACCTACCTTTCCTGCTTTGCAACTTCCTATCTCCATCTTCAAGCGTGAGATTTATCCTCTGGAAATTAGGATAGAGTTGTTGGTTTGTCGAATGATTCCTGCAATAATAGACCAACCACAAGAAGTAATGATGGTTCCAACAAGCGACAATGCAATGGAGAGTATGCTAAAGAGAGTGGAGAACAACGAAGAACTAATGAAATTAGGTGACGACAGTATTGATTGTGTTATTTGCTTGGAGAAAATTGGTAAAGAGGAGAAAAGAAGTGGGAGGGTGGTGTTACAAATGCCATGTTTGCATATGTTTCATGAAGAATGTATAAGGAAGTGGTTGAAGACAAGTCATTTCTGTCCAACTTGTAGATTTTCAATGCCTATAAACAATTGA

Coding sequence (CDS)

ATGGCCGAACAAAACCTCGATGCTTGTATGTCTGCAGGTTACTACATGGGTATGTCCTTAAGAATTACCGATCCCGACCTAAGGCATCGTCAACCACAAAGCCAAATTCAAACTCAACCTAACTCGCCAGCACTTGTCAAACAAATCGACCTGAACTTCAAACTTCAAGTCAAATGCCAACACTTTGGAGCAGGTGAAGAAGGCAGCACATTTGCAACAACTTTACTTAGTGAACACATAATCTCACAACCTACCTTTCCTGCTTTGCAACTTCCTATCTCCATCTTCAAGCGTGAGATTTATCCTCTGGAAATTAGGATAGAGTTGTTGGTTTGTCGAATGATTCCTGCAATAATAGACCAACCACAAGAAGTAATGATGGTTCCAACAAGCGACAATGCAATGGAGAGTATGCTAAAGAGAGTGGAGAACAACGAAGAACTAATGAAATTAGGTGACGACAGTATTGATTGTGTTATTTGCTTGGAGAAAATTGGTAAAGAGGAGAAAAGAAGTGGGAGGGTGGTGTTACAAATGCCATGTTTGCATATGTTTCATGAAGAATGTATAAGGAAGTGGTTGAAGACAAGTCATTTCTGTCCAACTTGTAGATTTTCAATGCCTATAAACAATTGA

Protein sequence

MAEQNLDACMSAGYYMGMSLRITDPDLRHRQPQSQIQTQPNSPALVKQIDLNFKLQVKCQHFGAGEEGSTFATTLLSEHIISQPTFPALQLPISIFKREIYPLEIRIELLVCRMIPAIIDQPQEVMMVPTSDNAMESMLKRVENNEELMKLGDDSIDCVICLEKIGKEEKRSGRVVLQMPCLHMFHEECIRKWLKTSHFCPTCRFSMPINN*
Homology
[Close]
BLAST of MELO3C018568 vs. Swiss-Prot
Match: RNG1L_ARATH (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 5.9e-08
Identity = 28/92 (30.43%), Postives = 49/92 (53.26%), Query Frame = 1 

Query: 120 DQPQEVMMVPTSDNAMESMLKRVENNEELMKLGDDSIDCVICLEKIGKEEKRSGRVVLQM 179
           + P      P S +A+++ L  V+  ++++K   +   C +C+     +E   G  V QM
Sbjct: 181 NDPNRYGTPPASKSAIDA-LPTVKVTKDMLK--SEMNQCAVCM-----DEFEDGSDVKQM 240

Query: 180 PCLHMFHEECIRKWLKTSHFCPTCRFSMPINN 212
           PC H+FH++C+  WL+  + CP CRF +P ++
Sbjct: 241 PCKHVFHQDCLLPWLELHNSCPVCRFELPTDD 264

[Close]
BLAST of MELO3C018568 vs. Swiss-Prot
Match: SDIR1_ARATH (E3 ubiquitin-protein ligase SDIR1 OS=Arabidopsis thaliana GN=SDIR1 PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.9e-07
Identity = 26/84 (30.95%), Postives = 39/84 (46.43%), Query Frame = 1 

Query: 122 PQEVMMVPTSDNAMESMLKRVENNEELMKLGDDSIDCVICLEKIGKEEKRSGRVVLQMPC 181
           P+    +    +   S  K +++  E  K  +D + C +CLE++       G +V  +PC
Sbjct: 175 PENGCSLAKQASTSSSAEKMLDSANESKKGTEDELTCSVCLEQV-----TVGEIVRTLPC 234

Query: 182 LHMFHEECIRKWLKTSHFCPTCRF 206
           LH FH  CI  WL+    CP C+F
Sbjct: 235 LHQFHAGCIDPWLRQQGTCPVCKF 253

[Close]
BLAST of MELO3C018568 vs. Swiss-Prot
Match: SIS3_ARATH (E3 ubiquitin-protein ligase SIS3 OS=Arabidopsis thaliana GN=SIS3 PE=2 SV=2)

HSP 1 Score: 56.2 bits (134), Expect = 5.0e-07
Identity = 29/81 (35.80%), Postives = 42/81 (51.85%), Query Frame = 1 

Query: 127 MVPTSDNAMESMLKRVENNEELMKLGDDSIDCVICLEKIGKEEKRSGRVVLQMPCLHMFH 186
           + P    A+E++++ +     L  + DD  +C+ICLE     E   G  V  +PC H FH
Sbjct: 205 LTPAQTEAVEALIQELPKFR-LKAVPDDCGECLICLE-----EFHIGHEVRGLPCAHNFH 264

Query: 187 EECIRKWLKTSHFCPTCRFSM 208
            ECI +WL+ +  CP CR S+
Sbjct: 265 VECIDQWLRLNVKCPRCRCSV 279

[Close]
BLAST of MELO3C018568 vs. Swiss-Prot
Match: HRD1_CAEBR (E3 ubiquitin-protein ligase hrd-1 OS=Caenorhabditis briggsae GN=sel-11 PE=3 SV=2)

HSP 1 Score: 53.5 bits (127), Expect = 3.2e-06
Identity = 27/81 (33.33%), Postives = 38/81 (46.91%), Query Frame = 1 

Query: 124 EVMMVPTSDNAMESMLKRVENNEELMKLGDDSIDCVICLEKIGKEEKRSGRVVLQMPCLH 183
           +V++   + NAM S    V N+E    L      C+IC E++  E         ++PC H
Sbjct: 262 DVILSRRAINAMNSQFPVVSNDE----LSAMDATCIICREEMTVESSPK-----RLPCSH 321

Query: 184 MFHEECIRKWLKTSHFCPTCR 205
           +FH  C+R W +    CPTCR
Sbjct: 322 VFHAHCLRSWFQRQQTCPTCR 333

[Close]
BLAST of MELO3C018568 vs. Swiss-Prot
Match: YKW3_SCHPO (Uncharacterized RING finger protein P32A8.03c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAP32A8.03c PE=3 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 7.2e-06
Identity = 24/78 (30.77%), Postives = 40/78 (51.28%), Query Frame = 1 

Query: 134 AMESMLKRVENNEELMKLGDDSIDCVICLEKIGKEEKRSGRVVLQMPCLHMFHEECIRKW 193
           A E ++ +++  +   +L D+  +C IC+E     +      V+Q+PC H FHE CI+ W
Sbjct: 372 APEDVIAKMKVQKPPKELIDEEGECTICMEMFKINDD-----VIQLPCKHYFHENCIKPW 431

Query: 194 LKTSHFCPTCRFSMPINN 212
           L+ +  C  CR  +  N+
Sbjct: 432 LRVNGTCAICRAPVDPNS 444

[Close]
BLAST of MELO3C018568 vs. TrEMBL
Match: E5GCQ4_CUCME (Hypothetical zinc finger protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 1.7e-59
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 1 

Query: 99  EIYPLEIRIELLVCRMIPAIIDQPQEVMMVPTSDNAMESMLKRVENNEELMKLGDDSIDC 158
           EIYPLEIRIELLVCRMIPAIIDQPQEVMMVPTSDNAMESMLKRVENNEELMKLGDDSIDC
Sbjct: 148 EIYPLEIRIELLVCRMIPAIIDQPQEVMMVPTSDNAMESMLKRVENNEELMKLGDDSIDC 207

Query: 159 VICLEKIGKEEKRSGRVVLQMPCLHMFHEECIRKWLKTSHFCPTCRFSMPINN 212
           VICLEKIGKEEKRSGRVVLQMPCLHMFHEECIRKWLKTSHFCPTCRFSMPINN
Sbjct: 208 VICLEKIGKEEKRSGRVVLQMPCLHMFHEECIRKWLKTSHFCPTCRFSMPINN 260

[Close]
BLAST of MELO3C018568 vs. TrEMBL
Match: E5GCQ4_CUCME (Hypothetical zinc finger protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 1.1e-48
Identity = 107/147 (72.79%), Postives = 119/147 (80.95%), Query Frame = 1 

Query: 1   MAEQNLDACMSAGYYMGMSLRITDPDLRHRQPQSQIQTQPNSPALVKQIDLNFKLQVKCQ 60
           MAEQNLDACMSAGYYMGMSLRITDPDLRHRQPQSQIQTQPNSPALVKQIDLNFKLQVKCQ
Sbjct: 1   MAEQNLDACMSAGYYMGMSLRITDPDLRHRQPQSQIQTQPNSPALVKQIDLNFKLQVKCQ 60

Query: 61  HFGAGEEGSTFATTLLSEHIISQPTFPALQLPISIFKREIYPLEIRIELLVCRMIPAIID 120
           HFGAGEEGSTFATTLLSEHIISQPTFPALQLPISIFKR    L+ R+     +M   I++
Sbjct: 61  HFGAGEEGSTFATTLLSEHIISQPTFPALQLPISIFKRGDKTLK-RLLFQKFQMFRGIVN 120

Query: 121 QPQEVMMVPTSDNAMESMLKRVENNEE 148
               V      D  ++  +++VE ++E
Sbjct: 121 VELVV------DEIIKHWIRKVEEDQE 140


HSP 2 Score: 177.2 bits (448), Expect = 2.1e-41
Identity = 119/270 (44.07%), Postives = 146/270 (54.07%), Query Frame = 1 

Query: 1   MAEQNLDACM-SAGYYMGMSLRITDPDLRHRQPQSQIQTQPNSPALVKQIDLNFKLQVKC 60
           MAEQ    C   +G Y+GMSLRITDPDLRH QPQSQI+T PNSP LVKQIDLNFK++VKC
Sbjct: 1   MAEQIFGPCRYGSGSYIGMSLRITDPDLRH-QPQSQIRTPPNSPTLVKQIDLNFKVEVKC 60

Query: 61  QH-FGAGEEG-STFATTLLSEHIISQPTFPALQLPISIFKR-------------EIYPLE 120
           QH F AGE G STFAT LLSEHI S    P LQLP+SIFK              +IY   
Sbjct: 61  QHYFQAGEGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAI 120

Query: 121 IRIELLVCRMIPAIIDQPQE-----------VMMVPTSDNAMESMLKRVENNEELM---- 180
           I IEL+V  +I   + +  E             +  T +  +  M+  ++   E+M    
Sbjct: 121 INIELVVDEIIKHWVKKVDEENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMMDQP 180

Query: 181 -----KLGDDSIDCVICLEKIGKEE--KRSGRVVLQM---------------------PC 212
                   + +++ +  L+K+  EE  K      +                       PC
Sbjct: 181 QVMMVPTSESAMESM--LKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPC 240

[Close]
BLAST of MELO3C018568 vs. TrEMBL
Match: A0A0A0K2A1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G067550 PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 4.0e-40
Identity = 92/120 (76.67%), Postives = 100/120 (83.33%), Query Frame = 1 

Query: 99  EIYPLEIRIELLVCRMIPAIIDQPQE------VMMVPTSDNAMESMLKRVENNEELMKLG 158
           EIYPLEI IE+LV +MI A+ DQPQE      V MVPTSD+AM+SMLKRVE NEE+MK+G
Sbjct: 137 EIYPLEITIEVLVLQMIDAV-DQPQETIDQPQVRMVPTSDSAMKSMLKRVE-NEEIMKVG 196

Query: 159 D-DSIDCVICLEKIGKEEKRSGRVVLQMPCLHMFHEECIRKWLKTSHFCPTCRFSMPINN 212
           D  SI CVICLEKI KEEK S  VVLQMPCLHMFHEECIRKWLKTSH+CPTCRFSM INN
Sbjct: 197 DYKSISCVICLEKISKEEKGSEGVVLQMPCLHMFHEECIRKWLKTSHYCPTCRFSMTINN 254

[Close]
BLAST of MELO3C018568 vs. TrEMBL
Match: A0A0A0K2A1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G067550 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 4.6e-28
Identity = 79/147 (53.74%), Postives = 98/147 (66.67%), Query Frame = 1 

Query: 1   MAEQNLDACMSAGYYMGMSLRITDPDLRHRQPQSQIQTQPNSPALVKQIDLNFKLQVKCQ 60
           MAEQN D C S GYYMGMSLRITDP          IQT+ NSP  VKQIDLNFK++VKCQ
Sbjct: 1   MAEQNFDDCTS-GYYMGMSLRITDP----------IQTRSNSPTSVKQIDLNFKVEVKCQ 60

Query: 61  HFGAGEEGSTFATTLLSEHIISQPTFPALQLPISIFKREIYPLEIRIELLVCRMIPAIID 120
           HF AGEE +TFATT LSEHII+   FPALQLP+SIFK     L+ R+     +M  AII+
Sbjct: 61  HFQAGEEDTTFATTFLSEHIIAHQPFPALQLPVSIFKHGDKTLK-RLLFQKFQMFRAIIN 120

Query: 121 QPQEVMMVPTSDNAMESMLKRVENNEE 148
                 +   +D  ++  +K+VE+++E
Sbjct: 121 ------IELVTDQIIKHWVKKVEDDKE 129


HSP 2 Score: 166.8 bits (421), Expect = 2.9e-38
Identity = 86/125 (68.80%), Postives = 102/125 (81.60%), Query Frame = 1 

Query: 94  SIFKREIYPLEIRIELLVCRMIPAI------IDQPQEVMMVPTSDNAMESMLKRVENNEE 153
           ++  ++IYPLEI I LLV +MI A+      IDQP   +MVPTSD+A+ESMLKRVEN EE
Sbjct: 145 NVLFKKIYPLEIMIRLLVSKMIRAVQPRLAMIDQP---LMVPTSDSAVESMLKRVEN-EE 204

Query: 154 LMKLGD-DSIDCVICLEKIGKEEKRSGRVVLQMPCLHMFHEECIRKWLKTSHFCPTCRFS 212
           +MK GD +SI+CV+CLE+I KEEK S   VLQMPCLHMFHEECIRKWLKTSH+CPTCRFS
Sbjct: 205 IMKSGDDESINCVVCLEEISKEEKGSETTVLQMPCLHMFHEECIRKWLKTSHYCPTCRFS 264

[Close]
BLAST of MELO3C018568 vs. TrEMBL
Match: E5GCQ3_CUCME (Hypothetical zinc finger protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 3.5e-36
Identity = 109/267 (40.82%), Postives = 142/267 (53.18%), Query Frame = 1 

Query: 1   MAEQNLDACM-SAGYYMGMSLRITDPDLRHRQPQSQIQTQPNSPALVKQIDLNFKLQVKC 60
           MAE+  + C   +G YMGMSLRITDP+ RH QP +QI  Q +SP LV+QI L FK+Q+KC
Sbjct: 1   MAEEIFNICRYGSGSYMGMSLRITDPNPRH-QPLNQID-QTSSPTLVEQICLKFKVQLKC 60

Query: 61  QHFGAGEEGSTFATTLLSEHIISQPTFPALQLPISIFKR-------------EIYPLEIR 120
           QHF   E G+  +TTL+ EHI SQ +F   QLPISIFK              ++Y   I 
Sbjct: 61  QHFQVWEGGNGHSTTLVREHIRSQHSFATFQLPISIFKHGDKTLKRILFREFKMYGDIIN 120

Query: 121 IELLVCRMIPAII-------DQ------------PQEVMMVPTSDNAMESMLKRVENNEE 180
           IELL   +I   +       DQ            P E+M+       + ++  R+   ++
Sbjct: 121 IELLANEIIKHWVRKVEEEEDQENNSNVLFKKIYPLEIMIRLLVSKMIRAVQPRLAMIDQ 180

Query: 181 LMKLGDDSIDCVICLEKIGKEE-KRSG----------------------RVVLQMPCLHM 212
            + +          L+++  EE  +SG                        VLQMPCLHM
Sbjct: 181 PLMVPTSDSAVESMLKRVENEEIMKSGDDESINCVVCLEEISKEEKGSETTVLQMPCLHM 240


HSP 2 Score: 165.2 bits (417), Expect = 8.4e-38
Identity = 88/124 (70.97%), Postives = 100/124 (80.65%), Query Frame = 1 

Query: 95  IFKREIYPLEIRIELLVCRMIPAI------IDQPQEVMMVPTSDNAMESMLKRVENNEEL 154
           +   EIYPLEI IELL+ RMI AI      IDQPQ V MVP S++AMESMLKRVE  EE+
Sbjct: 143 VLLEEIYPLEITIELLLLRMIHAIDQPEETIDQPQ-VTMVPASESAMESMLKRVE-KEEI 202

Query: 155 MKLGDD-SIDCVICLEKIGKEEKRSGRVVLQMPCLHMFHEECIRKWLKTSHFCPTCRFSM 212
           +K+G+D SI+CVICLE+I K+ K S  VVLQMPCLHMFHEECIR WLKTSH+CPTCRFSM
Sbjct: 203 VKVGEDKSINCVICLEEISKKMKGSEGVVLQMPCLHMFHEECIRTWLKTSHYCPTCRFSM 262

[Close]
BLAST of MELO3C018568 vs. TAIR10
Match: AT3G13228.1 (AT3G13228.1 RING/U-box superfamily protein)

HSP 1 Score: 62.0 bits (149), Expect = 5.1e-10
Identity = 33/121 (27.27%), Postives = 59/121 (48.76%), Query Frame = 1 

Query: 88  ALQLPISIFKREIYPLEIRIELLVCRMIPAIIDQPQEVMMVPTSDNAMESMLKRVENNEE 147
           ALQ+ + +F  +   +E  +++          D+     + P S   ++S+ +++ +   
Sbjct: 218 ALQVSLYLFPHDETDIEEAVQVS--------FDETTNFCLGPASKLVVKSLTRKIYD--- 277

Query: 148 LMKLGDDSIDCVICLEKIGKEEKRSGRVVLQMPCLHMFHEECIRKWLKTSHFCPTCRFSM 207
             K+      C ICLE     E  +G +++ +PC H F +EC  KW +T+HFCP CR+ +
Sbjct: 278 --KINYTGERCTICLE-----EFNAGGILVALPCGHDFDDECAVKWFETNHFCPLCRYEL 320

Query: 208 P 209
           P
Sbjct: 338 P 320

[Close]
BLAST of MELO3C018568 vs. TAIR10
Match: AT1G18770.1 (AT1G18770.1 RING/U-box superfamily protein)

HSP 1 Score: 60.8 bits (146), Expect = 1.1e-09
Identity = 24/51 (47.06%), Postives = 32/51 (62.75%), Query Frame = 1 

Query: 158 CVICLEKIGKEEKRSGRVVLQMPCLHMFHEECIRKWLKTSHFCPTCRFSMP 209
           C+ICLE+  +     GR V+ +PC H F +EC+ KW +T+H CP CRF +P
Sbjct: 59  CIICLEEFSE-----GRRVVTLPCGHDFDDECVLKWFETNHSCPLCRFKLP 104

[Close]
BLAST of MELO3C018568 vs. TAIR10
Match: AT3G19950.1 (AT3G19950.1 RING/U-box superfamily protein)

HSP 1 Score: 59.3 bits (142), Expect = 3.3e-09
Identity = 28/92 (30.43%), Postives = 49/92 (53.26%), Query Frame = 1 

Query: 120 DQPQEVMMVPTSDNAMESMLKRVENNEELMKLGDDSIDCVICLEKIGKEEKRSGRVVLQM 179
           + P      P S +A+++ L  V+  ++++K   +   C +C+     +E   G  V QM
Sbjct: 181 NDPNRYGTPPASKSAIDA-LPTVKVTKDMLK--SEMNQCAVCM-----DEFEDGSDVKQM 240

Query: 180 PCLHMFHEECIRKWLKTSHFCPTCRFSMPINN 212
           PC H+FH++C+  WL+  + CP CRF +P ++
Sbjct: 241 PCKHVFHQDCLLPWLELHNSCPVCRFELPTDD 264

[Close]
BLAST of MELO3C018568 vs. TAIR10
Match: AT1G26800.1 (AT1G26800.1 RING/U-box superfamily protein)

HSP 1 Score: 58.5 bits (140), Expect = 5.6e-09
Identity = 26/54 (48.15%), Postives = 30/54 (55.56%), Query Frame = 1 

Query: 157 DCVICLEKIGKEEKRSGRVVLQMPCLHMFHEECIRKWLKTSHFCPTCRFSMPIN 211
           +CVICLE+   EE      V +MPC H FH  CI KWL     CP CR+ MP++
Sbjct: 112 ECVICLEEWKSEE-----TVKEMPCKHRFHGGCIEKWLGFHGSCPVCRYEMPVD 160

[Close]
BLAST of MELO3C018568 vs. TAIR10
Match: AT1G14200.1 (AT1G14200.1 RING/U-box superfamily protein)

HSP 1 Score: 57.4 bits (137), Expect = 1.3e-08
Identity = 30/81 (37.04%), Postives = 40/81 (49.38%), Query Frame = 1 

Query: 129 PTSDNAMESMLKRVENNEELMKLGDDSIDCVICLEKIGKEEKRSGRVVLQMPCLHMFHEE 188
           P   + +E+M  RV   E+  K G     C ICL++  K     G V  +MPC H FH +
Sbjct: 84  PALKSEVENM-PRVVIGEDKEKYGGS---CAICLDEWSK-----GDVAAEMPCKHKFHSK 143

Query: 189 CIRKWLKTSHFCPTCRFSMPI 210
           C+ +WL     CP CR+ MP+
Sbjct: 144 CVEEWLGRHATCPMCRYEMPV 155

[Close]
BLAST of MELO3C018568 vs. NCBI nr
Match: gi|659111005|ref|XP_008455526.1| (PREDICTED: uncharacterized protein LOC103495678 [Cucumis melo])

HSP 1 Score: 237.3 bits (604), Expect = 2.5e-59
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 1 

Query: 99  EIYPLEIRIELLVCRMIPAIIDQPQEVMMVPTSDNAMESMLKRVENNEELMKLGDDSIDC 158
           EIYPLEIRIELLVCRMIPAIIDQPQEVMMVPTSDNAMESMLKRVENNEELMKLGDDSIDC
Sbjct: 148 EIYPLEIRIELLVCRMIPAIIDQPQEVMMVPTSDNAMESMLKRVENNEELMKLGDDSIDC 207

Query: 159 VICLEKIGKEEKRSGRVVLQMPCLHMFHEECIRKWLKTSHFCPTCRFSMPINN 212
           VICLEKIGKEEKRSGRVVLQMPCLHMFHEECIRKWLKTSHFCPTCRFSMPINN
Sbjct: 208 VICLEKIGKEEKRSGRVVLQMPCLHMFHEECIRKWLKTSHFCPTCRFSMPINN 260

[Close]
BLAST of MELO3C018568 vs. NCBI nr
Match: gi|659111005|ref|XP_008455526.1| (PREDICTED: uncharacterized protein LOC103495678 [Cucumis melo])

HSP 1 Score: 201.4 bits (511), Expect = 1.5e-48
Identity = 107/147 (72.79%), Postives = 119/147 (80.95%), Query Frame = 1 

Query: 1   MAEQNLDACMSAGYYMGMSLRITDPDLRHRQPQSQIQTQPNSPALVKQIDLNFKLQVKCQ 60
           MAEQNLDACMSAGYYMGMSLRITDPDLRHRQPQSQIQTQPNSPALVKQIDLNFKLQVKCQ
Sbjct: 1   MAEQNLDACMSAGYYMGMSLRITDPDLRHRQPQSQIQTQPNSPALVKQIDLNFKLQVKCQ 60

Query: 61  HFGAGEEGSTFATTLLSEHIISQPTFPALQLPISIFKREIYPLEIRIELLVCRMIPAIID 120
           HFGAGEEGSTFATTLLSEHIISQPTFPALQLPISIFKR    L+ R+     +M   I++
Sbjct: 61  HFGAGEEGSTFATTLLSEHIISQPTFPALQLPISIFKRGDKTLK-RLLFQKFQMFRGIVN 120

Query: 121 QPQEVMMVPTSDNAMESMLKRVENNEE 148
               V      D  ++  +++VE ++E
Sbjct: 121 VELVV------DEIIKHWIRKVEEDQE 140


HSP 2 Score: 177.2 bits (448), Expect = 3.1e-41
Identity = 119/270 (44.07%), Postives = 146/270 (54.07%), Query Frame = 1 

Query: 1   MAEQNLDACM-SAGYYMGMSLRITDPDLRHRQPQSQIQTQPNSPALVKQIDLNFKLQVKC 60
           MAEQ    C   +G Y+GMSLRITDPDLRH QPQSQI+T PNSP LVKQIDLNFK++VKC
Sbjct: 1   MAEQIFGPCRYGSGSYIGMSLRITDPDLRH-QPQSQIRTPPNSPTLVKQIDLNFKVEVKC 60

Query: 61  QH-FGAGEEG-STFATTLLSEHIISQPTFPALQLPISIFKR-------------EIYPLE 120
           QH F AGE G STFAT LLSEHI S    P LQLP+SIFK              +IY   
Sbjct: 61  QHYFQAGEGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAI 120

Query: 121 IRIELLVCRMIPAIIDQPQE-----------VMMVPTSDNAMESMLKRVENNEELM---- 180
           I IEL+V  +I   + +  E             +  T +  +  M+  ++   E+M    
Sbjct: 121 INIELVVDEIIKHWVKKVDEENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMMDQP 180

Query: 181 -----KLGDDSIDCVICLEKIGKEE--KRSGRVVLQM---------------------PC 212
                   + +++ +  L+K+  EE  K      +                       PC
Sbjct: 181 QVMMVPTSESAMESM--LKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPC 240

[Close]
BLAST of MELO3C018568 vs. NCBI nr
Match: gi|700188567|gb|KGN43800.1| (hypothetical protein Csa_7G067550 [Cucumis sativus])

HSP 1 Score: 172.9 bits (437), Expect = 5.8e-40
Identity = 92/120 (76.67%), Postives = 100/120 (83.33%), Query Frame = 1 

Query: 99  EIYPLEIRIELLVCRMIPAIIDQPQE------VMMVPTSDNAMESMLKRVENNEELMKLG 158
           EIYPLEI IE+LV +MI A+ DQPQE      V MVPTSD+AM+SMLKRVE NEE+MK+G
Sbjct: 137 EIYPLEITIEVLVLQMIDAV-DQPQETIDQPQVRMVPTSDSAMKSMLKRVE-NEEIMKVG 196

Query: 159 D-DSIDCVICLEKIGKEEKRSGRVVLQMPCLHMFHEECIRKWLKTSHFCPTCRFSMPINN 212
           D  SI CVICLEKI KEEK S  VVLQMPCLHMFHEECIRKWLKTSH+CPTCRFSM INN
Sbjct: 197 DYKSISCVICLEKISKEEKGSEGVVLQMPCLHMFHEECIRKWLKTSHYCPTCRFSMTINN 254

[Close]
BLAST of MELO3C018568 vs. NCBI nr
Match: gi|700188567|gb|KGN43800.1| (hypothetical protein Csa_7G067550 [Cucumis sativus])

HSP 1 Score: 132.9 bits (333), Expect = 6.7e-28
Identity = 79/147 (53.74%), Postives = 98/147 (66.67%), Query Frame = 1 

Query: 1   MAEQNLDACMSAGYYMGMSLRITDPDLRHRQPQSQIQTQPNSPALVKQIDLNFKLQVKCQ 60
           MAEQN D C S GYYMGMSLRITDP          IQT+ NSP  VKQIDLNFK++VKCQ
Sbjct: 1   MAEQNFDDCTS-GYYMGMSLRITDP----------IQTRSNSPTSVKQIDLNFKVEVKCQ 60

Query: 61  HFGAGEEGSTFATTLLSEHIISQPTFPALQLPISIFKREIYPLEIRIELLVCRMIPAIID 120
           HF AGEE +TFATT LSEHII+   FPALQLP+SIFK     L+ R+     +M  AII+
Sbjct: 61  HFQAGEEDTTFATTFLSEHIIAHQPFPALQLPVSIFKHGDKTLK-RLLFQKFQMFRAIIN 120

Query: 121 QPQEVMMVPTSDNAMESMLKRVENNEE 148
                 +   +D  ++  +K+VE+++E
Sbjct: 121 ------IELVTDQIIKHWVKKVEDDKE 129


HSP 2 Score: 166.8 bits (421), Expect = 4.2e-38
Identity = 86/125 (68.80%), Postives = 102/125 (81.60%), Query Frame = 1 

Query: 94  SIFKREIYPLEIRIELLVCRMIPAI------IDQPQEVMMVPTSDNAMESMLKRVENNEE 153
           ++  ++IYPLEI I LLV +MI A+      IDQP   +MVPTSD+A+ESMLKRVEN EE
Sbjct: 145 NVLFKKIYPLEIMIRLLVSKMIRAVQPRLAMIDQP---LMVPTSDSAVESMLKRVEN-EE 204

Query: 154 LMKLGD-DSIDCVICLEKIGKEEKRSGRVVLQMPCLHMFHEECIRKWLKTSHFCPTCRFS 212
           +MK GD +SI+CV+CLE+I KEEK S   VLQMPCLHMFHEECIRKWLKTSH+CPTCRFS
Sbjct: 205 IMKSGDDESINCVVCLEEISKEEKGSETTVLQMPCLHMFHEECIRKWLKTSHYCPTCRFS 264

[Close]
BLAST of MELO3C018568 vs. NCBI nr
Match: gi|659111003|ref|XP_008455525.1| (PREDICTED: uncharacterized protein LOC103495676 [Cucumis melo])

HSP 1 Score: 159.8 bits (403), Expect = 5.1e-36
Identity = 109/267 (40.82%), Postives = 142/267 (53.18%), Query Frame = 1 

Query: 1   MAEQNLDACM-SAGYYMGMSLRITDPDLRHRQPQSQIQTQPNSPALVKQIDLNFKLQVKC 60
           MAE+  + C   +G YMGMSLRITDP+ RH QP +QI  Q +SP LV+QI L FK+Q+KC
Sbjct: 1   MAEEIFNICRYGSGSYMGMSLRITDPNPRH-QPLNQID-QTSSPTLVEQICLKFKVQLKC 60

Query: 61  QHFGAGEEGSTFATTLLSEHIISQPTFPALQLPISIFKR-------------EIYPLEIR 120
           QHF   E G+  +TTL+ EHI SQ +F   QLPISIFK              ++Y   I 
Sbjct: 61  QHFQVWEGGNGHSTTLVREHIRSQHSFATFQLPISIFKHGDKTLKRILFREFKMYGDIIN 120

Query: 121 IELLVCRMIPAII-------DQ------------PQEVMMVPTSDNAMESMLKRVENNEE 180
           IELL   +I   +       DQ            P E+M+       + ++  R+   ++
Sbjct: 121 IELLANEIIKHWVRKVEEEEDQENNSNVLFKKIYPLEIMIRLLVSKMIRAVQPRLAMIDQ 180

Query: 181 LMKLGDDSIDCVICLEKIGKEE-KRSG----------------------RVVLQMPCLHM 212
            + +          L+++  EE  +SG                        VLQMPCLHM
Sbjct: 181 PLMVPTSDSAVESMLKRVENEEIMKSGDDESINCVVCLEEISKEEKGSETTVLQMPCLHM 240


HSP 2 Score: 165.2 bits (417), Expect = 1.2e-37
Identity = 88/124 (70.97%), Postives = 100/124 (80.65%), Query Frame = 1 

Query: 95  IFKREIYPLEIRIELLVCRMIPAI------IDQPQEVMMVPTSDNAMESMLKRVENNEEL 154
           +   EIYPLEI IELL+ RMI AI      IDQPQ V MVP S++AMESMLKRVE  EE+
Sbjct: 143 VLLEEIYPLEITIELLLLRMIHAIDQPEETIDQPQ-VTMVPASESAMESMLKRVE-KEEI 202

Query: 155 MKLGDD-SIDCVICLEKIGKEEKRSGRVVLQMPCLHMFHEECIRKWLKTSHFCPTCRFSM 212
           +K+G+D SI+CVICLE+I K+ K S  VVLQMPCLHMFHEECIR WLKTSH+CPTCRFSM
Sbjct: 203 VKVGEDKSINCVICLEEISKKMKGSEGVVLQMPCLHMFHEECIRTWLKTSHYCPTCRFSM 262

The following BLAST results are available for this feature:
BLAST of MELO3C018568 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RNG1L_ARATH5.9e-0830.43E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana GN=At3g19950 PE=1... [more]
SDIR1_ARATH2.9e-0730.95E3 ubiquitin-protein ligase SDIR1 OS=Arabidopsis thaliana GN=SDIR1 PE=1 SV=1[more]
SIS3_ARATH5.0e-0735.80E3 ubiquitin-protein ligase SIS3 OS=Arabidopsis thaliana GN=SIS3 PE=2 SV=2[more]
HRD1_CAEBR3.2e-0633.33E3 ubiquitin-protein ligase hrd-1 OS=Caenorhabditis briggsae GN=sel-11 PE=3 SV=2[more]
YKW3_SCHPO7.2e-0630.77Uncharacterized RING finger protein P32A8.03c OS=Schizosaccharomyces pombe (stra... [more]
BLAST of MELO3C018568 vs. TrEMBL
Match NameE-valueIdentityDescription
E5GCQ4_CUCME1.7e-59100.00Hypothetical zinc finger protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
E5GCQ4_CUCME1.1e-4872.79Hypothetical zinc finger protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A0A0A0K2A1_CUCSA4.0e-4076.67Uncharacterized protein OS=Cucumis sativus GN=Csa_7G067550 PE=4 SV=1[more]
A0A0A0K2A1_CUCSA4.6e-2853.74Uncharacterized protein OS=Cucumis sativus GN=Csa_7G067550 PE=4 SV=1[more]
E5GCQ3_CUCME3.5e-3640.82Hypothetical zinc finger protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
BLAST of MELO3C018568 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G13228.15.1e-1027.27 RING/U-box superfamily protein[more]
AT1G18770.11.1e-0947.06 RING/U-box superfamily protein[more]
AT3G19950.13.3e-0930.43 RING/U-box superfamily protein[more]
AT1G26800.15.6e-0948.15 RING/U-box superfamily protein[more]
AT1G14200.11.3e-0837.04 RING/U-box superfamily protein[more]
BLAST of MELO3C018568 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659111005|ref|XP_008455526.1|2.5e-59100.00PREDICTED: uncharacterized protein LOC103495678 [Cucumis melo][more]
gi|659111005|ref|XP_008455526.1|1.5e-4872.79PREDICTED: uncharacterized protein LOC103495678 [Cucumis melo][more]
gi|700188567|gb|KGN43800.1|5.8e-4076.67hypothetical protein Csa_7G067550 [Cucumis sativus][more]
gi|700188567|gb|KGN43800.1|6.7e-2853.74hypothetical protein Csa_7G067550 [Cucumis sativus][more]
gi|659111003|ref|XP_008455525.1|5.1e-3640.82PREDICTED: uncharacterized protein LOC103495676 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR011016Znf_RING-CH
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C018568T1MELO3C018568T1mRNA


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 157..204
score: 8.7
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 158..203
score: 4.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 158..204
score: 12
IPR011016Zinc finger, RING-CH-typeSMARTSM00744ringv_2coord: 157..204
score: 0.
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 153..207
score: 1.3
NoneNo IPR availablePANTHERPTHR22763RING ZINC FINGER PROTEINcoord: 127..211
score: 7.2
NoneNo IPR availablePANTHERPTHR22763:SF78E3 UBIQUITIN-PROTEIN LIGASE RHA2Acoord: 127..211
score: 7.2
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 157..208
score: 4.04

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C018568Wax gourdmewgoB198
MELO3C018568Wax gourdmewgoB218
MELO3C018568Melon (DHL92) v3.5.1memeB079
MELO3C018568Melon (DHL92) v3.5.1memeB094
MELO3C018568Cucurbita moschata (Rifu)cmomeB096
MELO3C018568Cucumber (Gy14) v1cgymeB379
MELO3C018568Cucurbita maxima (Rimu)cmameB097
MELO3C018568Cucurbita maxima (Rimu)cmameB098
MELO3C018568Cucurbita maxima (Rimu)cmameB458
MELO3C018568Cucurbita maxima (Rimu)cmameB463
MELO3C018568Cucurbita maxima (Rimu)cmameB672
MELO3C018568Cucurbita moschata (Rifu)cmomeB085
MELO3C018568Cucurbita moschata (Rifu)cmomeB448
MELO3C018568Cucurbita moschata (Rifu)cmomeB454
MELO3C018568Cucurbita moschata (Rifu)cmomeB665
MELO3C018568Wild cucumber (PI 183967)cpimeB538
MELO3C018568Cucumber (Chinese Long) v2cumeB530
MELO3C018568Watermelon (Charleston Gray)mewcgB176
MELO3C018568Watermelon (Charleston Gray)mewcgB189
MELO3C018568Watermelon (Charleston Gray)mewcgB197
MELO3C018568Watermelon (97103) v1mewmB206
MELO3C018568Watermelon (97103) v1mewmB217
MELO3C018568Cucurbita pepo (Zucchini)cpemeB219
MELO3C018568Cucurbita pepo (Zucchini)cpemeB225
MELO3C018568Cucurbita pepo (Zucchini)cpemeB394
MELO3C018568Cucurbita pepo (Zucchini)cpemeB604
MELO3C018568Cucurbita pepo (Zucchini)cpemeB614
MELO3C018568Bottle gourd (USVL1VR-Ls)lsimeB247
MELO3C018568Bottle gourd (USVL1VR-Ls)lsimeB251
MELO3C018568Bottle gourd (USVL1VR-Ls)lsimeB253
MELO3C018568Cucumber (Gy14) v2cgybmeB468
MELO3C018568Silver-seed gourdcarmeB0185
MELO3C018568Silver-seed gourdcarmeB0291
MELO3C018568Silver-seed gourdcarmeB0378
MELO3C018568Silver-seed gourdcarmeB0460
MELO3C018568Silver-seed gourdcarmeB0726
MELO3C018568Silver-seed gourdcarmeB0728
MELO3C018568Cucumber (Chinese Long) v3cucmeB548
MELO3C018568Watermelon (97103) v2mewmbB174
MELO3C018568Watermelon (97103) v2mewmbB180
MELO3C018568Watermelon (97103) v2mewmbB224