MELO3C018227 (gene) Melon (DHL92) v3.5.1

NameMELO3C018227
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionEn/Spm-like transposon protein, putative
Locationchr4 : 8136583 .. 8136839 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAGATGGTCTTCTAACGATCCAACTACTCTGGTCCATCATGTTCCTATTGGTCCACATGCGATTAGAGTATGGGTTGATGTAGCAAAGAAACCAAACGCATATTTGTGGAGGCCAACATCAGAAATGACATGTATTGAAGAAGCTTTGGGAAGTACAGTTACATGGCCATCTGATAAAGTGATCATTAGTATGTTGTCTGATTCTAATATTTTTTTGTCTACATTTGTTAAAGATTTTCTATACTTGTTTAATTAA

mRNA sequence

GAAGATGGTCTTCTAACGATCCAACTACTCTGGTCCATCATGTTCCTATTGGTCCACATGCGATTAGAGTATGGGTTGATGTAGCAAAGAAACCAAACGCATATTTGTGGAGGCCAACATCAGAAATGACATGTATTGAAGAAGCTTTGGGAAGTACAGTTACATGGCCATCTGATAAAGTGATCATTAGTATGTTGTCTGATTCTAATATTTTTTTGTCTACATTTGTTAAAGATTTTCTATACTTGTTTAATTAA

Coding sequence (CDS)

GAAGATGGTCTTCTAACGATCCAACTACTCTGGTCCATCATGTTCCTATTGGTCCACATGCGATTAGAGTATGGGTTGATGTAGCAAAGAAACCAAACGCATATTTGTGGAGGCCAACATCAGAAATGACATGTATTGAAGAAGCTTTGGGAAGTACAGTTACATGGCCATCTGATAAAGTGATCATTAGTATGTTGTCTGATTCTAATATTTTTTTGTCTACATTTGTTAAAGATTTTCTATACTTGTTTAATTAA

Protein sequence

RWSSNDPTTLVHHVPIGPHAIRVWVDVAKKPNAYLWRPTSEMTCIEEALGSTVTWPSDKVIISMLSDSNIFLSTFVKDFLYLFN*
BLAST of MELO3C018227 vs. TrEMBL
Match: W9RRP8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_017777 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 6.0e-19
Identity = 43/63 (68.25%), Postives = 55/63 (87.30%), Query Frame = 1

Query: 1   RWSSNDPTTLVHHVPIGPHAIRVWVDVAKKPNAYLWRPTSEMTCIEEALGSTVTWPSDKV 60
           R SS DP  LVH++P+GP+A+RVWVDV KKP+A+LWRPTSEMT IEEA+G T+ WP+DKV
Sbjct: 696 RRSSTDPKALVHNIPLGPNAMRVWVDVVKKPDAFLWRPTSEMTSIEEAVGCTIAWPADKV 755

Query: 61  IIS 64
           I++
Sbjct: 756 IMT 758

BLAST of MELO3C018227 vs. TrEMBL
Match: A0A0A0L5I2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G113900 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.1e-17
Identity = 39/63 (61.90%), Postives = 52/63 (82.54%), Query Frame = 1

Query: 1    RWSSNDPTTLVHHVPIGPHAIRVWVDVAKKPNAYLWRPTSEMTCIEEALGSTVTWPSDKV 60
            RWSSNDP  +VHHVP+GP A++VWVD+ K+ +A+LWRP SEM  I++A+GS V WP DKV
Sbjct: 1187 RWSSNDPKVIVHHVPLGPQAVKVWVDLPKRSDAFLWRPNSEMHYIKDAVGSAVAWPLDKV 1246

Query: 61   IIS 64
            ++S
Sbjct: 1247 VMS 1249

BLAST of MELO3C018227 vs. TrEMBL
Match: W9SIX0_9ROSA (Anthranilate synthase component I-2 OS=Morus notabilis GN=L484_025310 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 3.3e-17
Identity = 39/61 (63.93%), Postives = 52/61 (85.25%), Query Frame = 1

Query: 1   RWSSNDPTTLVHHVPIGPHAIRVWVDVAKKPNAYLWRPTSEMTCIEEALGSTVTWPSDKV 60
           R   +DP  LVHHVP+GP+A+R+WVDVAK+P+A+LWRPTSEM+ IEEA+ S V WP+DK+
Sbjct: 201 RLMPSDPKDLVHHVPLGPNAVRLWVDVAKQPDAFLWRPTSEMSTIEEAISSNVAWPADKI 260

Query: 61  I 62
           +
Sbjct: 261 L 261

BLAST of MELO3C018227 vs. TrEMBL
Match: Q9ZUQ3_ARATH (En/Spm-like transposon protein OS=Arabidopsis thaliana GN=At2g12220 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 2.4e-12
Identity = 30/63 (47.62%), Postives = 46/63 (73.02%), Query Frame = 1

Query: 1   RWSSNDPTTLVHHVPIGPHAIRVWVDVAKKPNAYLWRPTSEMTCIEEALGSTVTWPSDKV 60
           RW++NDP   VH VP+G + ++VWVD+ K  +  +WRP+ E+  +E+ALG+ + WP DKV
Sbjct: 719 RWATNDPKQKVHFVPLGDNVVKVWVDIVKVSDVKVWRPSDEVEIMEDALGTAIAWPEDKV 778

Query: 61  IIS 64
           I+S
Sbjct: 779 IMS 781

BLAST of MELO3C018227 vs. TrEMBL
Match: Q9ZUQ3_ARATH (En/Spm-like transposon protein OS=Arabidopsis thaliana GN=At2g12220 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 1.7e-05
Identity = 23/59 (38.98%), Postives = 37/59 (62.71%), Query Frame = 1

Query: 4   SNDPTTLVHHVPIGPHAIRVWVDVAKKPNAYLWRPTSEMTCIEEALGSTVTWPSDKVII 63
           S+DP  +V+   +GP  ++V V+ A  P+A+LWRP   M  I EA+G  + WP+ K ++
Sbjct: 541 SSDPDDVVNDCRLGPVDLKVLVEAANTPDAFLWRPAPNMYTITEAVGQMIAWPASKCVL 599


HSP 2 Score: 78.2 bits (191), Expect = 5.4e-12
Identity = 30/63 (47.62%), Postives = 46/63 (73.02%), Query Frame = 1

Query: 1    RWSSNDPTTLVHHVPIGPHAIRVWVDVAKKPNAYLWRPTSEMTCIEEALGSTVTWPSDKV 60
            RW++NDP   VH VP+  +A++VWVD+ K  +  +WRP+ E+  +E+ALG+ + WP DKV
Sbjct: 1369 RWATNDPKQKVHFVPLDDNAVKVWVDIVKVSDVTVWRPSDEVEIMEDALGTAIAWPEDKV 1428

Query: 61   IIS 64
            I+S
Sbjct: 1429 IMS 1431

BLAST of MELO3C018227 vs. NCBI nr
Match: gi|659109399|ref|XP_008454697.1| (PREDICTED: uncharacterized protein LOC103495052 [Cucumis melo])

HSP 1 Score: 134.0 bits (336), Expect = 1.2e-28
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 1

Query: 1   RWSSNDPTTLVHHVPIGPHAIRVWVDVAKKPNAYLWRPTSEMTCIEEALGSTVTWPSDKV 60
           RWSSNDPTTLVHHVPIGPHAIRVWVDVAKKPNAYLWRPTSEMTCIEEALGSTVTWPSDKV
Sbjct: 416 RWSSNDPTTLVHHVPIGPHAIRVWVDVAKKPNAYLWRPTSEMTCIEEALGSTVTWPSDKV 475

BLAST of MELO3C018227 vs. NCBI nr
Match: gi|659134181|ref|XP_008467069.1| (PREDICTED: uncharacterized protein LOC103504506, partial [Cucumis melo])

HSP 1 Score: 132.1 bits (331), Expect = 4.6e-28
Identity = 58/62 (93.55%), Postives = 60/62 (96.77%), Query Frame = 1

Query: 1   RWSSNDPTTLVHHVPIGPHAIRVWVDVAKKPNAYLWRPTSEMTCIEEALGSTVTWPSDKV 60
           RWSSNDPT +VHH+PIGPHAIRVWVDVAKKPNAYLWRPTSEMTCIEEALGSTV WPSDKV
Sbjct: 78  RWSSNDPTAMVHHIPIGPHAIRVWVDVAKKPNAYLWRPTSEMTCIEEALGSTVAWPSDKV 137

Query: 61  II 63
           II
Sbjct: 138 II 139

BLAST of MELO3C018227 vs. NCBI nr
Match: gi|659134037|ref|XP_008467002.1| (PREDICTED: uncharacterized protein LOC103504411 [Cucumis melo])

HSP 1 Score: 131.7 bits (330), Expect = 6.0e-28
Identity = 59/63 (93.65%), Postives = 61/63 (96.83%), Query Frame = 1

Query: 1   RWSSNDPTTLVHHVPIGPHAIRVWVDVAKKPNAYLWRPTSEMTCIEEALGSTVTWPSDKV 60
           RWSSNDPT +V+HVPIGPHAIRVWVDVAKKPNAYLWRPTSEMTCIEEALGSTV WPSDKV
Sbjct: 55  RWSSNDPTAMVYHVPIGPHAIRVWVDVAKKPNAYLWRPTSEMTCIEEALGSTVAWPSDKV 114

Query: 61  IIS 64
           IIS
Sbjct: 115 IIS 117

BLAST of MELO3C018227 vs. NCBI nr
Match: gi|659123183|ref|XP_008461536.1| (PREDICTED: uncharacterized protein LOC103500108 [Cucumis melo])

HSP 1 Score: 111.3 bits (277), Expect = 8.3e-22
Identity = 50/65 (76.92%), Postives = 55/65 (84.62%), Query Frame = 1

Query: 1   RWSSNDPTTLVHHVPIGPHAIRVWVDVAKKPNAYLWRPTSEMTCIEEALGSTVTWPSDKV 60
           RWSSN   TL+HHV IGP++IRVWVDVAKKPNAYLWRPT EMTCIE+ LGSTV WP DKV
Sbjct: 189 RWSSNGLATLLHHVHIGPYSIRVWVDVAKKPNAYLWRPTLEMTCIEKTLGSTVAWPYDKV 248

Query: 61  IISML 66
            I +L
Sbjct: 249 TIGLL 253

BLAST of MELO3C018227 vs. NCBI nr
Match: gi|659102534|ref|XP_008452184.1| (PREDICTED: uncharacterized protein LOC103493280 [Cucumis melo])

HSP 1 Score: 106.7 bits (265), Expect = 2.1e-20
Identity = 43/63 (68.25%), Postives = 55/63 (87.30%), Query Frame = 1

Query: 1    RWSSNDPTTLVHHVPIGPHAIRVWVDVAKKPNAYLWRPTSEMTCIEEALGSTVTWPSDKV 60
            RWSSNDP  +VHHVP+GP A+RVWVD+ K+P+A+LWRP SEMT +++A+GST+ WP DKV
Sbjct: 1199 RWSSNDPKVIVHHVPLGPQAVRVWVDLPKRPDAFLWRPNSEMTYVKDAVGSTIAWPFDKV 1258

Query: 61   IIS 64
            IIS
Sbjct: 1259 IIS 1261

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
W9RRP8_9ROSA6.0e-1968.25Uncharacterized protein OS=Morus notabilis GN=L484_017777 PE=4 SV=1[more]
A0A0A0L5I2_CUCSA1.1e-1761.90Uncharacterized protein OS=Cucumis sativus GN=Csa_3G113900 PE=4 SV=1[more]
W9SIX0_9ROSA3.3e-1763.93Anthranilate synthase component I-2 OS=Morus notabilis GN=L484_025310 PE=4 SV=1[more]
Q9ZUQ3_ARATH2.4e-1247.62En/Spm-like transposon protein OS=Arabidopsis thaliana GN=At2g12220 PE=4 SV=1[more]
Q9ZUQ3_ARATH1.7e-0538.98En/Spm-like transposon protein OS=Arabidopsis thaliana GN=At2g12220 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|659109399|ref|XP_008454697.1|1.2e-28100.00PREDICTED: uncharacterized protein LOC103495052 [Cucumis melo][more]
gi|659134181|ref|XP_008467069.1|4.6e-2893.55PREDICTED: uncharacterized protein LOC103504506, partial [Cucumis melo][more]
gi|659134037|ref|XP_008467002.1|6.0e-2893.65PREDICTED: uncharacterized protein LOC103504411 [Cucumis melo][more]
gi|659123183|ref|XP_008461536.1|8.3e-2276.92PREDICTED: uncharacterized protein LOC103500108 [Cucumis melo][more]
gi|659102534|ref|XP_008452184.1|2.1e-2068.25PREDICTED: uncharacterized protein LOC103493280 [Cucumis melo][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004264Transposase_23
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009058 biosynthetic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0016833 oxo-acid-lyase activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C018227T1MELO3C018227T1mRNA


Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004264Transposase, Tnp1/En/Spm-likePFAMPF03017Transposase_23coord: 4..49
score: 1.

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None