MELO3C018108 (gene) Melon (DHL92) v3.5.1

NameMELO3C018108
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionProtein translocase subunit SecA
Locationchr4 : 10436753 .. 10436977 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGAAACAAAGCTAAGGGAGCTGAAAAAGCTCCTTAGTCAGGTTGAGAAAGTAGCCCTCTCCGTGGAGAAAGGCAAAGACAAAGAAAATAATTTTGACGAGCATTGCGAGGAGTTTAAGAAAGAGATTGAGGAGTTAAGTCCTTTGCTGGACGAGATGGTAAGACCCGCCAAAAAGAGAAAAGTTGCGATGAAGAAGAAGACTTTAAGAGCGCAATTTTAG

mRNA sequence

ATGAAGGAAACAAAGCTAAGGGAGCTGAAAAAGCTCCTTAGTCAGGTTGAGAAAGTAGCCCTCTCCGTGGAGAAAGGCAAAGACAAAGAAAATAATTTTGACGAGCATTGCGAGGAGTTTAAGAAAGAGATTGAGGAGTTAAGTCCTTTGCTGGACGAGATGGTAAGACCCGCCAAAAAGAGAAAAGTTGCGATGAAGAAGAAGACTTTAAGAGCGCAATTTTAG

Coding sequence (CDS)

ATGAAGGAAACAAAGCTAAGGGAGCTGAAAAAGCTCCTTAGTCAGGTTGAGAAAGTAGCCCTCTCCGTGGAGAAAGGCAAAGACAAAGAAAATAATTTTGACGAGCATTGCGAGGAGTTTAAGAAAGAGATTGAGGAGTTAAGTCCTTTGCTGGACGAGATGGTAAGACCCGCCAAAAAGAGAAAAGTTGCGATGAAGAAGAAGACTTTAAGAGCGCAATTTTAG

Protein sequence

MKETKLRELKKLLSQVEKVALSVEKGKDKENNFDEHCEEFKKEIEELSPLLDEMVRPAKKRKVAMKKKTLRAQF*
BLAST of MELO3C018108 vs. TrEMBL
Match: A0A0A0K7W9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G290550 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 1.2e-10
Identity = 35/73 (47.95%), Postives = 56/73 (76.71%), Query Frame = 1

Query: 2  KETKLRELKKLLSQVEKVALSVEKGKDKENNFDEHCEEFKKEIEELSPLLDEMVRPAKKR 61
          K+ KLRE K+LL+++++  +S +KGK ++   +E CEEF++++E+LSPL DE+V+P KK 
Sbjct: 13 KKVKLREQKELLNKIDQAPISTKKGKVRKTPSEEICEEFERKLEDLSPLEDEVVKPLKK- 72

Query: 62 KVAMKKKTLRAQF 75
          KV +KK  L+ QF
Sbjct: 73 KVTVKKSVLKKQF 84

BLAST of MELO3C018108 vs. TrEMBL
Match: A0A0A0KN01_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G366680 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 3.0e-06
Identity = 31/67 (46.27%), Postives = 51/67 (76.12%), Query Frame = 1

Query: 1  MKETKLRELKKLLSQVEKVALSVEKGKDKENNFDEHCEEFKKEIEELSPLLDEMVRPAKK 60
          M+E   RE ++LL++V+K+ALSVE+ K K+    E C+E +KE+E+ +  L+E+++P++K
Sbjct: 1  MREKGNREREELLNKVKKIALSVERDKTKKTP-SELCDELEKELEDENS-LEEVIKPSRK 60

Query: 61 RKVAMKK 68
          RKV MKK
Sbjct: 61 RKVTMKK 65

BLAST of MELO3C018108 vs. NCBI nr
Match: gi|659083323|ref|XP_008442290.1| (PREDICTED: stress response protein NST1-like [Cucumis melo])

HSP 1 Score: 90.5 bits (223), Expect = 1.3e-15
Identity = 47/74 (63.51%), Postives = 60/74 (81.08%), Query Frame = 1

Query: 2   KETKLRELKKLLSQVEKVALSVEKGKDKENNFDEHCEEFKKEIEELSPLLDEMV-RPAKK 61
           KE KLR+ ++LL++V+K+ALSVEKGK+KE  F+E  +EF+KEI+E SPL D +V RPAKK
Sbjct: 42  KEIKLRQPEELLNKVDKLALSVEKGKEKEKTFEEFYKEFEKEIDEFSPLEDNVVERPAKK 101

Query: 62  RKVAMKKKTLRAQF 75
           R V MKKK LR QF
Sbjct: 102 RNVTMKKKVLRDQF 115

BLAST of MELO3C018108 vs. NCBI nr
Match: gi|659090014|ref|XP_008445787.1| (PREDICTED: axoneme-associated protein mst101(3)-like [Cucumis melo])

HSP 1 Score: 89.4 bits (220), Expect = 3.0e-15
Identity = 44/73 (60.27%), Postives = 57/73 (78.08%), Query Frame = 1

Query: 2   KETKLRELKKLLSQVEKVALSVEKGKDKENNFDEHCEEFKKEIEELSPLLDEMVRPAKKR 61
           KETKLRE ++LL +V+ VALS EK K +E NF+ H EEF+KEI++L PL ++++RPAKKR
Sbjct: 94  KETKLREREELLGKVDNVALSAEKDKCEEKNFEVHYEEFEKEIDKLCPLEEKVIRPAKKR 153

Query: 62  KVAMKKKTLRAQF 75
              MKKK LR QF
Sbjct: 154 TFTMKKKALRKQF 166

BLAST of MELO3C018108 vs. NCBI nr
Match: gi|659130998|ref|XP_008465464.1| (PREDICTED: DNA ligase 1-like [Cucumis melo])

HSP 1 Score: 80.9 bits (198), Expect = 1.1e-12
Identity = 42/65 (64.62%), Postives = 53/65 (81.54%), Query Frame = 1

Query: 2   KETKLRELKKLLSQVEKVALSVEKGKDKENNFDEHCEEFKKEIEELSPLLDEMVRPAKKR 61
           KE KLRE ++LL++V+KVALSVEK K+ E  F+EHCEEFKKEIEELSPL DE+V  + K+
Sbjct: 62  KEIKLREKEELLNKVDKVALSVEKRKE-EKTFEEHCEEFKKEIEELSPLEDEVVEKSSKK 121

Query: 62  KVAMK 67
           K  M+
Sbjct: 122 KRIME 125

BLAST of MELO3C018108 vs. NCBI nr
Match: gi|700189199|gb|KGN44432.1| (hypothetical protein Csa_7G290550 [Cucumis sativus])

HSP 1 Score: 73.6 bits (179), Expect = 1.7e-10
Identity = 35/73 (47.95%), Postives = 56/73 (76.71%), Query Frame = 1

Query: 2  KETKLRELKKLLSQVEKVALSVEKGKDKENNFDEHCEEFKKEIEELSPLLDEMVRPAKKR 61
          K+ KLRE K+LL+++++  +S +KGK ++   +E CEEF++++E+LSPL DE+V+P KK 
Sbjct: 13 KKVKLREQKELLNKIDQAPISTKKGKVRKTPSEEICEEFERKLEDLSPLEDEVVKPLKK- 72

Query: 62 KVAMKKKTLRAQF 75
          KV +KK  L+ QF
Sbjct: 73 KVTVKKSVLKKQF 84

BLAST of MELO3C018108 vs. NCBI nr
Match: gi|659109371|ref|XP_008454680.1| (PREDICTED: uncharacterized protein LOC103495036 [Cucumis melo])

HSP 1 Score: 71.2 bits (173), Expect = 8.4e-10
Identity = 37/62 (59.68%), Postives = 51/62 (82.26%), Query Frame = 1

Query: 2   KETKLRELKKLLSQVEKVALSVEKGKDKENNFDEHCEEFKKEIEELSPLLD-EMVRPAKK 61
           KETKLRE ++LL++VEKVALS EKGK K+   +E+C+EF++E+EELSP  D E+V+P K 
Sbjct: 60  KETKLREQEELLNKVEKVALSTEKGKTKKTT-EEYCKEFEREVEELSPFKDEEVVKPPKI 119

Query: 62  RK 63
           +K
Sbjct: 120 KK 120

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0K7W9_CUCSA1.2e-1047.95Uncharacterized protein OS=Cucumis sativus GN=Csa_7G290550 PE=4 SV=1[more]
A0A0A0KN01_CUCSA3.0e-0646.27Uncharacterized protein OS=Cucumis sativus GN=Csa_5G366680 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|659083323|ref|XP_008442290.1|1.3e-1563.51PREDICTED: stress response protein NST1-like [Cucumis melo][more]
gi|659090014|ref|XP_008445787.1|3.0e-1560.27PREDICTED: axoneme-associated protein mst101(3)-like [Cucumis melo][more]
gi|659130998|ref|XP_008465464.1|1.1e-1264.62PREDICTED: DNA ligase 1-like [Cucumis melo][more]
gi|700189199|gb|KGN44432.1|1.7e-1047.95hypothetical protein Csa_7G290550 [Cucumis sativus][more]
gi|659109371|ref|XP_008454680.1|8.4e-1059.68PREDICTED: uncharacterized protein LOC103495036 [Cucumis melo][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C018108T1MELO3C018108T1mRNA