MELO3C018072 (gene) Melon (DHL92) v3.5.1

NameMELO3C018072
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionMono(ADP-ribosyl)transferase SpvB
Locationchr4 : 11190089 .. 11190436 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAGAGTAGAGGCAGAGCTGAACAATCATCATCATCTTGGAGAGGTGAAGGCAGAGCTCTTTCATCGTCATCATTTTGGAGAGGTAAAGTTGCATCATCATCGTCATCTTAGAGAGACGAAGGTAAAGCTGCTTCATTGCATCAGCTTTAGAGAAGTGGAAATAAAGTTGCACCGTCTTTGTCATCTTAGAGTGGCAGAGGTAGAGATGCACCATCATTATCCTCTCGAAGTTGCACTATCATCATTTAAAGAGTTGGAGGTCGAGATGTATTATCATCATCATGCTCGAAGCTGCAACACATTGGAGATGAATAATCCCTTTGATGGTCGATATTGGAGATAA

mRNA sequence

ATGGAAAGAGTAGAGGCAGAGCTGAACAATCATCATCATCTTGGAGAGGTGAAGGCAGAGCTCTTTCATCGTCATCATTTTGGAGAGGTAAAGTTGCATCATCATCGTCATCTTAGAGAGACGAAGGTAAAGCTGCTTCATTGCATCAGCTTTAGAGAAGTGGAAATAAAGTTGCACCGTCTTTGTCATCTTAGAGTGGCAGAGGTAGAGATGCACCATCATTATCCTCTCGAAGTTGCACTATCATCATTTAAAGAGTTGGAGGTCGAGATGTATTATCATCATCATGCTCGAAGCTGCAACACATTGGAGATGAATAATCCCTTTGATGGTCGATATTGGAGATAA

Coding sequence (CDS)

ATGGAAAGAGTAGAGGCAGAGCTGAACAATCATCATCATCTTGGAGAGGTGAAGGCAGAGCTCTTTCATCGTCATCATTTTGGAGAGGTAAAGTTGCATCATCATCGTCATCTTAGAGAGACGAAGGTAAAGCTGCTTCATTGCATCAGCTTTAGAGAAGTGGAAATAAAGTTGCACCGTCTTTGTCATCTTAGAGTGGCAGAGGTAGAGATGCACCATCATTATCCTCTCGAAGTTGCACTATCATCATTTAAAGAGTTGGAGGTCGAGATGTATTATCATCATCATGCTCGAAGCTGCAACACATTGGAGATGAATAATCCCTTTGATGGTCGATATTGGAGATAA

Protein sequence

MERVEAELNNHHHLGEVKAELFHRHHFGEVKLHHHRHLRETKVKLLHCISFREVEIKLHRLCHLRVAEVEMHHHYPLEVALSSFKELEVEMYYHHHARSCNTLEMNNPFDGRYWR*
BLAST of MELO3C018072 vs. NCBI nr
Match: gi|659082637|ref|XP_008441951.1| (PREDICTED: histidine-rich glycoprotein-like [Cucumis melo])

HSP 1 Score: 90.5 bits (223), Expect = 2.1e-15
Identity = 47/105 (44.76%), Postives = 60/105 (57.14%), Query Frame = 1

Query: 5   EAELNNHHHLGEVKAELFHRHH-------------FGEVKLHHHRHLRETKVKLLHCISF 64
           E EL++H HLGE + ELFHRHH             F + ++HHHR+LRE K +L H    
Sbjct: 148 EVELHHHCHLGEAEVELFHRHHLREAEAKLHCHHHFRDAEMHHHRYLREAKAELHHRCYL 207

Query: 65  REVEIKLHRLCHLRVAEVEMHHHYPLEVALSSFKELEVEMYYHHH 97
            EVE K+H   HLR AE E HHHY         K+ E E+++HHH
Sbjct: 208 GEVEAKMHHCRHLREAEAE-HHHY------RHHKKAEAELHHHHH 245

BLAST of MELO3C018072 vs. NCBI nr
Match: gi|659082637|ref|XP_008441951.1| (PREDICTED: histidine-rich glycoprotein-like [Cucumis melo])

HSP 1 Score: 83.2 bits (204), Expect = 3.3e-13
Identity = 45/98 (45.92%), Postives = 59/98 (60.20%), Query Frame = 1

Query: 1   MERVEAELNNHHHLGEVKAELFHRHHFGE--VKLHHHRHLRETKVKLLHCISFREVEIKL 60
           +   EAEL+ + HL E +AEL HRHH  E   KLHH  H  E +V+L H    RE +++L
Sbjct: 40  LREAEAELHYYCHLREAEAELHHRHHLKEREAKLHHRYHCGEGEVELHHHCYLREAKVEL 99

Query: 61  HRLCHLRVAEVEMHHHYPLEVALSSFKELEVEMYYHHH 97
           HR  HL  A+VE+HHH  L       KE +VE+Y+ HH
Sbjct: 100 HRPRHLGKAKVELHHHRHL-------KEAKVELYHCHH 130


HSP 2 Score: 82.4 bits (202), Expect = 5.7e-13
Identity = 49/126 (38.89%), Postives = 62/126 (49.21%), Query Frame = 1

Query: 1   MERVEAELNNHHHLGEVKAELFHRHHFGE----------------------------VKL 60
           +   EAEL++ HHL E +A+L HR+H GE                            V+L
Sbjct: 53  LREAEAELHHRHHLKEREAKLHHRYHCGEGEVELHHHCYLREAKVELHRPRHLGKAKVEL 112

Query: 61  HHHRHLRETKVKLLHCISFREVEIKLHRLCHLRVAEVEMHHHYPLEVALSSFKELEVEMY 99
           HHHRHL+E KV+L HC    E E  LH   HL   EVE+HHH  L        E EVE++
Sbjct: 113 HHHRHLKEAKVELYHCHHPLEREAILHHHRHLGEREVELHHHCHL-------GEAEVELF 171


HSP 3 Score: 75.1 bits (183), Expect = 9.0e-11
Identity = 45/117 (38.46%), Postives = 59/117 (50.43%), Query Frame = 1

Query: 3   RVEAELNNHHHLGEVKAELFHRHH-------------FGE--VKLHHHRHLRETKVKLLH 62
           + + EL++H HL E K EL+H HH              GE  V+LHHH HL E +V+L H
Sbjct: 107 KAKVELHHHRHLKEAKVELYHCHHPLEREAILHHHRHLGEREVELHHHCHLGEAEVELFH 166

Query: 63  CISFREVEIKLHRLCHLRVAEVEMHHHYPLEVALSSFK------ELEVEMYYHHHAR 99
               RE E KLH  CH    + EMHHH  L  A +         E+E +M++  H R
Sbjct: 167 RHHLREAEAKLH--CHHHFRDAEMHHHRYLREAKAELHHRCYLGEVEAKMHHCRHLR 221


HSP 4 Score: 66.2 bits (160), Expect = 4.2e-08
Identity = 36/102 (35.29%), Postives = 51/102 (50.00%), Query Frame = 1

Query: 5   EAELNNHHHLGEVKAELFHRHHF--GEVKLHHHRHLRETKVKLLHCISFREVEIKLHRLC 64
           E +L+ HH   E   EL   HH    E +LH++ HLRE + +L H    +E E KLH   
Sbjct: 18  EVKLHRHHFFRETAVELHQHHHLREAEAELHYYCHLREAEAELHHRHHLKEREAKLHHRY 77

Query: 65  HLRVAEVEMHHHYPLEVALSSFK------ELEVEMYYHHHAR 99
           H    EVE+HHH  L  A           + +VE+++H H +
Sbjct: 78  HCGEGEVELHHHCYLREAKVELHRPRHLGKAKVELHHHRHLK 119


HSP 5 Score: 61.6 bits (148), Expect = 1.0e-06
Identity = 31/70 (44.29%), Postives = 45/70 (64.29%), Query Frame = 1

Query: 5   EAELNNHHHLGEVKAELFHRHHFGEV--KLHHHRHLRETKVKLLHCISFREVEIKLHRLC 64
           +AE+++H +L E KAEL HR + GEV  K+HH RHLRE + +  H    ++ E +LH   
Sbjct: 185 DAEMHHHRYLREAKAELHHRCYLGEVEAKMHHCRHLREAEAEHHHYRHHKKAEAELHHHH 244

Query: 65  HLRVAEVEMH 73
           HL   EV++H
Sbjct: 245 HLGELEVKLH 254


HSP 6 Score: 60.5 bits (145), Expect = 2.3e-06
Identity = 34/88 (38.64%), Postives = 48/88 (54.55%), Query Frame = 1

Query: 27  FGEVKLHHHRHLRETKVKLLHCISFREVEIKLHRLCHLRVAEVEMHHHYPLEVALSSFK- 86
           + EVKLH H   RET V+L      RE E +LH  CHLR AE E+HH + L+   +    
Sbjct: 16  YQEVKLHRHHFFRETAVELHQHHHLREAEAELHYYCHLREAEAELHHRHHLKEREAKLHH 75

Query: 87  -----ELEVEMYYHHHARSCNTLEMNNP 109
                E EVE+++H + R    +E++ P
Sbjct: 76  RYHCGEGEVELHHHCYLREAK-VELHRP 102


HSP 7 Score: 45.1 bits (105), Expect = 1.0e-01
Identity = 27/62 (43.55%), Postives = 38/62 (61.29%), Query Frame = 1

Query: 4   VEAELNNHHHLGEVKAELFH-RHHF-GEVKLHHHRHLRETKVKLLHCISFREVEIKLHRL 63
           VEA++++  HL E +AE  H RHH   E +LHHH HL E +VK LH I   E + + + +
Sbjct: 210 VEAKMHHCRHLREAEAEHHHYRHHKKAEAELHHHHHLGELEVK-LHIIVILERQRQSYTI 269

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
gi|659082637|ref|XP_008441951.1|2.1e-1544.76PREDICTED: histidine-rich glycoprotein-like [Cucumis melo][more]
gi|659082637|ref|XP_008441951.1|3.3e-1345.92PREDICTED: histidine-rich glycoprotein-like [Cucumis melo][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C018072T1MELO3C018072T1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C018072Cucumber (Chinese Long) v3cucmeB207
MELO3C018072Wild cucumber (PI 183967)cpimeB201
MELO3C018072Cucumber (Chinese Long) v2cumeB208