MELO3C018068 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C018068
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionGag-pol polyprotein
Locationchr4 : 11279712 .. 11280719 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGTCACAACTACAGACGAAGCTAACGACGTTACTGCAATGAAACTTGACGAGCTGTTTGGATCGCTGAGAACTTTTGAATTAAACCTGGGAGAAGGCAATTCCAAGAAGAAATATGGCGTCGCTTTTTCATCAGTAAGTGAGGATGTGTCTCAATCTCTGAAGGAACACATTAGCAAAGAAAACTTGGCCAAGCAAATTGTCTTTTTAACTAAACAATTGTCAAAGCTTTGGAGTTAAGTTCATAAGCATATTGGGAATTATAGAAATCATAACTATCGTGATTTTAATACATCCTCTTCATACTCTCAGAACTATTTAAGTTCAAACAATAGCATCAATTTAAACATAAGAAGGGAGAATGAGAAAGGTGATAGAGAGTCTAGGTTCTCAAAAAATGATAGAAGCAGTAGAAGCATCCGATGCCATGAGTATGATGGTTTTGAACATTATCAAGCTGAGTGTGCTACATTTCTGAAATGCAAGAGGAAACGTTTAATAGTCACCTTATCTGACGACGAAGCTACGTCCGACAGTGAGTCTGAAAAAATTGGTAGAGCTCTCACCAGTACTCTTATAGAAAACGAGCCTAGTAAAAAAGGTGGTTCCAATAAACAGAAGGGAGCTATTACATGCATTGATTATCAGGGATTCTCACTATGTATTACTTCAGTTGGATGTGATTTAGCCAGGAAATGGGAAAAATACCAAATCGTACTGAAACAACAGAAAGAAAGAATACAAGCCTTGATAGAGGAAAATCACCATCTCATGTCATGCATTGCTATTCTCAAAGTTGAACTGAAAGAAGCCCGTTATAACTTTGAGTATCTTTCTAAATTCGTTAAGATGCTCACATCCTGGACAAAGACTCTGGATAGTATTTTGAATGATGGAAAAACCAGGTGTGAAAGAAAGGGTTTGGGTTTTTTTGGAAATTGTACTTTTAGCATAAATTCTTCCATTTATTTGTTCGAGCCTCGAGCAACGTTGACAATAGCATAG

mRNA sequence

ATGAAGGTCACAACTACAGACGAAGCTAACGACGTTACTGCAATGAAACTTGACGAGCTGTTTGGATCGCTGAGAACTTTTGAATTAAACCTGGGAGAAGGCAATTCCAAGAAGAAATATGGCGTCGCTTTTTCATCAGTAAGTGAGGATGTGTCTCAATCTCTGAAGGAACACATTAGCAAAGAAAACTTGGCCAAGCAAATTAACTATTTAAGTTCAAACAATAGCATCAATTTAAACATAAGAAGGGAGAATGAGAAAGGTGATAGAGAGTCTAGGTTCTCAAAAAATGATAGAAGCAGTAGAAGCATCCGATGCCATGAGTATGATGGTTTTGAACATTATCAAGCTGAGTGTGCTACATTTCTGAAATGCAAGAGGAAACGTTTAATAGTCACCTTATCTGACGACGAAGCTACGTCCGACAGTGAGTCTGAAAAAATTGGTAGAGCTCTCACCAGTACTCTTATAGAAAACGAGCCTAGTAAAAAAGGTGGTTCCAATAAACAGAAGGGAGCTATTACATGCATTGATTATCAGGGATTCTCACTATGTATTACTTCAGTTGGATGTGATTTAGCCAGGAAATGGGAAAAATACCAAATCGTACTGAAACAACAGAAAGAAAGAATACAAGCCTTGATAGAGGAAAATCACCATCTCATGTCATGCATTGCTATTCTCAAAGTTGAACTGAAAGAAGCCCGTTATAACTTTGAGTATCTTTCTAAATTCGTTAAGATGCTCACATCCTGGACAAAGACTCTGGATAGTATTTTGAATGATGGAAAAACCAGGTGTGAAAGAAAGGGTTTGGGTTTTTTTGGAAATTGTACTTTTAGCATAAATTCTTCCATTTATTTGTTCGAGCCTCGAGCAACGTTGACAATAGCATAG

Coding sequence (CDS)

ATGAAGGTCACAACTACAGACGAAGCTAACGACGTTACTGCAATGAAACTTGACGAGCTGTTTGGATCGCTGAGAACTTTTGAATTAAACCTGGGAGAAGGCAATTCCAAGAAGAAATATGGCGTCGCTTTTTCATCAGTAAGTGAGGATGTGTCTCAATCTCTGAAGGAACACATTAGCAAAGAAAACTTGGCCAAGCAAATTAACTATTTAAGTTCAAACAATAGCATCAATTTAAACATAAGAAGGGAGAATGAGAAAGGTGATAGAGAGTCTAGGTTCTCAAAAAATGATAGAAGCAGTAGAAGCATCCGATGCCATGAGTATGATGGTTTTGAACATTATCAAGCTGAGTGTGCTACATTTCTGAAATGCAAGAGGAAACGTTTAATAGTCACCTTATCTGACGACGAAGCTACGTCCGACAGTGAGTCTGAAAAAATTGGTAGAGCTCTCACCAGTACTCTTATAGAAAACGAGCCTAGTAAAAAAGGTGGTTCCAATAAACAGAAGGGAGCTATTACATGCATTGATTATCAGGGATTCTCACTATGTATTACTTCAGTTGGATGTGATTTAGCCAGGAAATGGGAAAAATACCAAATCGTACTGAAACAACAGAAAGAAAGAATACAAGCCTTGATAGAGGAAAATCACCATCTCATGTCATGCATTGCTATTCTCAAAGTTGAACTGAAAGAAGCCCGTTATAACTTTGAGTATCTTTCTAAATTCGTTAAGATGCTCACATCCTGGACAAAGACTCTGGATAGTATTTTGAATGATGGAAAAACCAGGTGTGAAAGAAAGGGTTTGGGTTTTTTTGGAAATTGTACTTTTAGCATAAATTCTTCCATTTATTTGTTCGAGCCTCGAGCAACGTTGACAATAGCATAG

Protein sequence

MKVTTTDEANDVTAMKLDELFGSLRTFELNLGEGNSKKKYGVAFSSVSEDVSQSLKEHISKENLAKQINYLSSNNSINLNIRRENEKGDRESRFSKNDRSSRSIRCHEYDGFEHYQAECATFLKCKRKRLIVTLSDDEATSDSESEKIGRALTSTLIENEPSKKGGSNKQKGAITCIDYQGFSLCITSVGCDLARKWEKYQIVLKQQKERIQALIEENHHLMSCIAILKVELKEARYNFEYLSKFVKMLTSWTKTLDSILNDGKTRCERKGLGFFGNCTFSINSSIYLFEPRATLTIA*
Homology
[Close]
BLAST of MELO3C018068 vs. TrEMBL
Match: W9R3W7_9ROSA (Receptor-like protein 12 OS=Morus notabilis GN=L484_021844 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 1.0e-25
Identity = 104/344 (30.23%), Postives = 154/344 (44.77%), Query Frame = 1 

Query: 2   KVTTTDEANDVTAMKLDELFGSLRTFELNLGEGN-SKKKYGVAF-SSVSEDVSQSLKEHI 61
           KVT  +EA D+  +KLDEL GSLRTFE+NL E N  KK+  +AF + V  D  + L + I
Sbjct: 184 KVTAIEEAKDIQIIKLDELMGSLRTFEMNLDENNEGKKEKSIAFQAEVDYDDEEDLAQSI 243

Query: 62  SKENLAKQINYLSSNNSINLNIRRENEKGDRESRFSKNDRS---------SRSIRCHEYD 121
           +K  L+K+ N +       +N + EN +    S F KN  +         +R I+C E D
Sbjct: 244 TK--LSKKFNKVMK----KVNRKNENSRNGNSSNFQKNKAAANNIEMKIKNRGIQCRECD 303

Query: 122 GFEHYQAECATFLKCKRKRLIVTLSDDEATSDSESE-----------------KIGRALT 181
           G+ H Q+ECA  LK K+K    T SD+++    E E                  +G    
Sbjct: 304 GYSHIQSECANTLKKKKKSFNATWSDEDSEGSQEDEDHVSNYVAFNVYIDQSVSVGSVTK 363

Query: 182 ST--------LIENEPSKKGGSNKQKGAITCIDYQGFSLCITSVG---CDLARKWEKYQI 241
           S         + ++  S+ GG      +    D     L I ++      +  KW K   
Sbjct: 364 SVADSVATLPVTDSMNSENGGDFSDSES----DSDSEELTIDAIQESYKTMFSKWVKVCE 423

Query: 242 VLKQQKERIQALIEENHHLMSCIAILKVE-------LKEARYNFEYLSKFVKMLTSWTKT 296
           + K  +ER+  L++E   L       + +       L++     E   K +KM+ S T  
Sbjct: 424 MNKSLRERVDELVKEKDVLKKPAVNYEFQATENEKKLQDTMDELENTQKNLKMMNSGTIK 483

[Close]
BLAST of MELO3C018068 vs. TrEMBL
Match: A0A072USV5_MEDTR (Envelope-like protein, putative OS=Medicago truncatula GN=MTR_3g009370 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.7e-20
Identity = 86/295 (29.15%), Postives = 147/295 (49.83%), Query Frame = 1 

Query: 1   MKVTTTDEANDVTAMKLDELFGSLRTFELNLGEGNSKKKYGVAFSSVSEDVSQSLKEHIS 60
           MKV   +EA D+  MK+DEL GSL+ F++ +     KK+  +  +S + D + S +E+  
Sbjct: 1   MKVIVIEEAKDIPNMKIDELIGSLQNFKIMISNRGEKKEKRMVLAS-NSDTNDSQEEYEF 60

Query: 61  KENLA-------KQINYL---------SSNNSINLNIRRENEKGDRESRFSKNDRSSRSI 120
            E L+       KQ+N +         S++ +I  N   + +  ++E    K +  S+ I
Sbjct: 61  DERLSEAIALFGKQLNKVLELAECRPRSNDQNIKYNFGEQPDDMNKEGTEDKKNH-SKGI 120

Query: 121 RCHEYDGFEHYQAECATFLKCKRKRLIVTLSDDEATSDSESEKIGRALTSTLIENEPSKK 180
           +CHE +G+ H   EC TFLK ++K L V  S+++A+  +              EN  +K+
Sbjct: 121 QCHECEGYGHIMTECTTFLKKQKKSLTVLCSNEDASERN-------------FENNFTKQ 180

Query: 181 GGSNKQKGAI-----TCIDYQGFSLCITSVGCDLARKWEKYQIVLKQQKERIQALIEENH 240
              N   G +     +C +   +   + S     A+  E  Q++ +Q+KE  Q L E ++
Sbjct: 181 --INAMTGRVSSDIESCDEELVYDELVASYKGLYAKSAEICQMLEEQKKENSQLLSERSN 240

Query: 241 HLMSCIAILKVELKEARYNFEYLSKFVKMLTSWTKTLDSILNDGKTRCERKGLGF 275
           HL S I+ L  E++  +   E + K VKM+T+ T TLD +L   + +   KG+GF
Sbjct: 241 HLAS-ISELNDEVRLLKSQLENIMKQVKMMTTGTSTLDEVLK-AQVKENPKGIGF 276

[Close]
BLAST of MELO3C018068 vs. TrEMBL
Match: O65147_SOYBN (Gag-pol polyprotein OS=Glycine max GN=pol PE=4 SV=2)

HSP 1 Score: 107.1 bits (266), Expect = 3.8e-20
Identity = 95/292 (32.53%), Postives = 135/292 (46.23%), Query Frame = 1 

Query: 1   MKVTTTDEANDVTAMKLDELFGSLRTFELNLGEGNSKKKYGVAFSSVSE--------DVS 60
           MKVT  +EA D+  M++DEL GSL+TFEL L +   KK   +AF S  E        D  
Sbjct: 158 MKVTAIEEAQDICNMRVDELIGSLQTFELGLSDRTEKKSKNLAFVSNDEGEEDEYDLDTD 217

Query: 61  QSLKEHISKENLAKQINYLSSN---------NSINLNIRRENEKGDRESRFSKNDRSSRS 120
           + L   +    L KQ N + +           +I  +IR+ +E    + R  +    S+ 
Sbjct: 218 EGLTNAVVL--LGKQFNKVLNRMDRRQKPHVRNIPFDIRKGSE---YQKRSDEKPSHSKG 277

Query: 121 IRCHEYDGFEHYQAECATFLKCKRKRLIVTLSDD-EATSDSESEKIGRALTSTLIENEPS 180
           I+CH  +G+ H +AEC T LK +RK L V  SDD E+  +S+S++   ALT      E S
Sbjct: 278 IQCHGCEGYGHIKAECPTHLKKQRKGLSVCRSDDTESEQESDSDRDVNALTGRFESAEDS 337

Query: 181 KKGGSNKQKGAITCIDYQGFSLCITSVGCDLARKWEKYQIVLKQQKERIQALIEENHHLM 240
               S      +  I Y+   LCI S         EK      Q K+ I  L  E     
Sbjct: 338 SDTDSEITFDEL-AISYR--ELCIKS---------EKILQQEAQLKKVIANLEAEKEAHE 397

Query: 241 SCIAILKVELKEARYNFEYLSKFVKMLTSWTKTLDSILNDGKTRCERKGLGF 275
             I+ LK E+       E ++K +KML   +  LD +L  GK    ++GLGF
Sbjct: 398 DEISELKGEIGFLNSKLENMTKSIKMLNKGSDLLDEVLQLGKNVGNQRGLGF 432

[Close]
BLAST of MELO3C018068 vs. TrEMBL
Match: Q84VI0_SOYBN (Gag-pol polyprotein OS=Glycine max GN=gag-pol PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 3.8e-20
Identity = 95/292 (32.53%), Postives = 137/292 (46.92%), Query Frame = 1 

Query: 1   MKVTTTDEANDVTAMKLDELFGSLRTFELNLGEGNSKKKYGVAFSSVSE--------DVS 60
           MKVT  +EA D+  M++DEL GSL+TFEL L + N KK   +AF S  E        D  
Sbjct: 186 MKVTAIEEAQDICNMRVDELIGSLQTFELGLSDRNEKKSKNLAFVSNDEGEEDEYDLDTD 245

Query: 61  QSLKEHISKENLAKQINYLSSN---------NSINLNIRRENEKGDRESRFSKNDRSSRS 120
           + L   +    L KQ N + +           +I  +IR+ +E      +  +    S+ 
Sbjct: 246 EGLTNAVGL--LGKQFNKVLNRMDRRQKPHVRNIPFDIRKGSE---YHKKSDEKPSHSKG 305

Query: 121 IRCHEYDGFEHYQAECATFLKCKRKRLIVTLSDD-EATSDSESEKIGRALTSTLIENEPS 180
           I+CH  +G+ H +AEC T LK +RK L V  SDD E+  +S+S++   ALT     +E S
Sbjct: 306 IQCHGCEGYGHIKAECPTHLKKQRKGLSVCRSDDTESEQESDSDRDVNALTGRFESDEDS 365

Query: 181 KKGGSNKQKGAITCIDYQGFSLCITSVGCDLARKWEKYQIVLKQQKERIQALIEENHHLM 240
                   + AI+   Y+   LCI S         EK      Q K+ I  L  E     
Sbjct: 366 SDIEITFDELAIS---YR--KLCIKS---------EKILQQEAQLKKVIANLEAEKEAHE 425

Query: 241 SCIAILKVELKEARYNFEYLSKFVKMLTSWTKTLDSILNDGKTRCERKGLGF 275
             I+ LK E+       E ++K +KML   +  LD +L  GK    ++GLGF
Sbjct: 426 EEISELKGEVGFLNSKLENMTKSIKMLNKGSDMLDEVLQLGKNVGNQRGLGF 458

[Close]
BLAST of MELO3C018068 vs. TrEMBL
Match: Q84VH8_SOYBN (Gag-pol polyprotein OS=Glycine max GN=gag-pol PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.5e-19
Identity = 97/308 (31.49%), Postives = 138/308 (44.81%), Query Frame = 1 

Query: 1   MKVTTTDEANDVTAMKLDELFGSLRTFELNLGEGNSKKKYGVAFSSVSE--------DVS 60
           MKVT  +EA D+  M++DEL GSL+TFEL L +   KK   +AF S  E        D  
Sbjct: 185 MKVTAIEEAQDICNMRVDELIGSLQTFELGLSDRAEKKSKNLAFVSNDEGEEDEYDLDTD 244

Query: 61  QSLKEHI--SKENLAKQINYLSSNNSINL-NIRRENEKGDR-ESRFSKNDRSSRSIRCHE 120
           + L   +    +   K +N +      ++ NI  +  KG + + R       S+ I+CH 
Sbjct: 245 EGLTNAVVLLGKQFNKVLNRMDKRQKPHVQNIPFDIRKGSKYQKRSDVKPSHSKGIQCHG 304

Query: 121 YDGFEHYQAECATFLKCKRKRLIVTLSDDEATSDSESEKIGRALTSTLIENEPSKKGGSN 180
            +G+ H  AEC T LK  RK L V  SD E+  +S+S++   ALT      E S    S 
Sbjct: 305 CEGYGHIIAECPTHLKKHRKGLSVCQSDTESEQESDSDRDVNALTGIFETAEDSSDTDSE 364

Query: 181 KQKGAITCIDYQGFSLCITSVGCDLARKWEKYQIVLKQQKERIQALIEENHHLMSCIAIL 240
                +    Y+   LCI S         EK      Q K+ I  L  E       I+ L
Sbjct: 365 ITFDELAA-SYR--KLCIKS---------EKILQQEAQLKKVIADLEAEKEAHEEEISEL 424

Query: 241 KVELKEARYNFEYLSKFVKMLTSWTKTLDSILNDGKTRCERKGLGFFGNCTFSINSSIYL 297
           K E+       E + K +KML   + TLD +L  GK    ++GLGF  N  F+  +++  
Sbjct: 425 KGEVGFLNSKLETMKKSIKMLNKGSDTLDEVLLLGKNAGNQRGLGF--NPKFAGRTTMTE 478

[Close]
BLAST of MELO3C018068 vs. TAIR10
Match: AT4G05360.1 (AT4G05360.1 Zinc knuckle (CCHC-type) family protein)

HSP 1 Score: 62.0 bits (149), Expect = 7.2e-10
Identity = 70/247 (28.34%), Postives = 103/247 (41.70%), Query Frame = 1 

Query: 47  VSEDVSQSLKEHISKENLAKQINYLSSNNSINLNIRRENEKGDRESRFSKNDRSSRSIRC 106
           + ++V QSLK  +  E L        S N  N  +      G++E  +    +SS+  RC
Sbjct: 326 IIQEVRQSLKSRLM-EILRLPFKKRFSWNERNRALHEFKVDGNKEVLY----KSSKGKRC 385

Query: 107 HEYDGFEHYQAECATFLKCKRKRLIVTLSDDEATSDSESEKIGRALTSTLIENEPSKKGG 166
            E  GF H  +ECA  +K K K+ I  +SD E  SD + E++   +  T  E+  +    
Sbjct: 386 FECKGFRHMCSECANLMKEKEKKFI--MSDSEIDSD-DGEELKNLVAFTTFESSIASASA 445

Query: 167 SNKQKGAITCIDYQGFSLCIT------SVGCDLARKWEKYQIVLKQQKERIQALIEENHH 226
           S     + T       +   T      S   DL+   E++    K   E    ++EEN  
Sbjct: 446 SGPTSASATGSTSASATGPATGSDNDQSDDDDLSISDEEFAENYKALYEHCVKVVEENSV 505

Query: 227 L--------MSCIAILK--VELKEARYNFEYLSKFVKMLTSWTKTLDSILNDGKTRCERK 278
           L           +  LK   E +E     E   K ++ML + TK L  IL+ GKT  ++ 
Sbjct: 506 LTKEKLKLEAKVVKTLKFAAEKEEEASQLEETQKNLRMLNNGTKKLGHILSIGKT--DKC 562

[Close]
BLAST of MELO3C018068 vs. NCBI nr
Match: gi|659109365|ref|XP_008454677.1| (PREDICTED: uncharacterized protein LOC103495033 [Cucumis melo])

HSP 1 Score: 164.1 bits (414), Expect = 3.8e-37
Identity = 108/306 (35.29%), Postives = 165/306 (53.92%), Query Frame = 1 

Query: 1   MKVTTTDEANDVTAMKLDELFGSLRTFELNLGEGNSKKKYGVAFSSVSEDVSQSLKEHIS 60
           MKVT  ++AND++ MKLD+LFGSLRTF+++LG   S++K G+A +SV E  ++  K   +
Sbjct: 1   MKVTAIEKANDLSKMKLDKLFGSLRTFKIHLGHTVSRRKPGLALTSVKEKPTEEHKVTQN 60

Query: 61  KENLAKQINYLSS-----------------NNSINLNIR---------------RENEKG 120
            + LA+ +  L+                  NN     IR               +++++G
Sbjct: 61  NDALAEYVVLLTKQVAKLKNQFHKHMGSQCNNREGQTIRQPKISYVSSSGLYRKKDHDRG 120

Query: 121 DRESRFSKNDRSSRSIRCHEYDGFEHYQAECATFLKCKRKRLIVTLSDDEATSDSESEKI 180
            +    S+ +   + IRCHE + F H Q+ECAT+LKCK+K L+ T S++E  S S+ E++
Sbjct: 121 -KGIGISRLEEYDKGIRCHECEEFGHIQSECATYLKCKKKGLVATFSNEEDYSKSDDEEV 180

Query: 181 GRALTSTLIENEPSKKGGSNKQKGAITCIDYQGFSLCITSVGCDLARKWEKYQIVLKQQK 240
           G  L S    N+      + +    +        + C+T  G    +K E  +I+L Q++
Sbjct: 181 GMTLISIYTMNDEEAAKVNTQTSDLLE----PTINKCLTD-GLVERKKTEDQEIIL-QRQ 240

Query: 241 ERIQALIEENHHLMSCIAILKVELKEARYNFEYLSKFVKMLTSWTKTLDSILNDGKTRCE 275
           ERIQ L+EEN   +S I  LK EL + ++ FE L KFVKMLT  T  LD IL  G+   +
Sbjct: 241 ERIQGLLEENQSFLSSIVTLKEELTKIKHQFEELLKFVKMLTYGTLKLDDILGQGRRVDD 299

[Close]
BLAST of MELO3C018068 vs. NCBI nr
Match: gi|703072544|ref|XP_010089312.1| (Receptor-like protein 12 [Morus notabilis])

HSP 1 Score: 125.6 bits (314), Expect = 1.5e-25
Identity = 104/344 (30.23%), Postives = 154/344 (44.77%), Query Frame = 1 

Query: 2   KVTTTDEANDVTAMKLDELFGSLRTFELNLGEGN-SKKKYGVAF-SSVSEDVSQSLKEHI 61
           KVT  +EA D+  +KLDEL GSLRTFE+NL E N  KK+  +AF + V  D  + L + I
Sbjct: 184 KVTAIEEAKDIQIIKLDELMGSLRTFEMNLDENNEGKKEKSIAFQAEVDYDDEEDLAQSI 243

Query: 62  SKENLAKQINYLSSNNSINLNIRRENEKGDRESRFSKNDRS---------SRSIRCHEYD 121
           +K  L+K+ N +       +N + EN +    S F KN  +         +R I+C E D
Sbjct: 244 TK--LSKKFNKVMK----KVNRKNENSRNGNSSNFQKNKAAANNIEMKIKNRGIQCRECD 303

Query: 122 GFEHYQAECATFLKCKRKRLIVTLSDDEATSDSESE-----------------KIGRALT 181
           G+ H Q+ECA  LK K+K    T SD+++    E E                  +G    
Sbjct: 304 GYSHIQSECANTLKKKKKSFNATWSDEDSEGSQEDEDHVSNYVAFNVYIDQSVSVGSVTK 363

Query: 182 ST--------LIENEPSKKGGSNKQKGAITCIDYQGFSLCITSVG---CDLARKWEKYQI 241
           S         + ++  S+ GG      +    D     L I ++      +  KW K   
Sbjct: 364 SVADSVATLPVTDSMNSENGGDFSDSES----DSDSEELTIDAIQESYKTMFSKWVKVCE 423

Query: 242 VLKQQKERIQALIEENHHLMSCIAILKVE-------LKEARYNFEYLSKFVKMLTSWTKT 296
           + K  +ER+  L++E   L       + +       L++     E   K +KM+ S T  
Sbjct: 424 MNKSLRERVDELVKEKDVLKKPAVNYEFQATENEKKLQDTMDELENTQKNLKMMNSGTIK 483

[Close]
BLAST of MELO3C018068 vs. NCBI nr
Match: gi|922376962|ref|XP_013458827.1| (envelope-like protein, putative [Medicago truncatula])

HSP 1 Score: 108.2 bits (269), Expect = 2.5e-20
Identity = 86/295 (29.15%), Postives = 147/295 (49.83%), Query Frame = 1 

Query: 1   MKVTTTDEANDVTAMKLDELFGSLRTFELNLGEGNSKKKYGVAFSSVSEDVSQSLKEHIS 60
           MKV   +EA D+  MK+DEL GSL+ F++ +     KK+  +  +S + D + S +E+  
Sbjct: 1   MKVIVIEEAKDIPNMKIDELIGSLQNFKIMISNRGEKKEKRMVLAS-NSDTNDSQEEYEF 60

Query: 61  KENLA-------KQINYL---------SSNNSINLNIRRENEKGDRESRFSKNDRSSRSI 120
            E L+       KQ+N +         S++ +I  N   + +  ++E    K +  S+ I
Sbjct: 61  DERLSEAIALFGKQLNKVLELAECRPRSNDQNIKYNFGEQPDDMNKEGTEDKKNH-SKGI 120

Query: 121 RCHEYDGFEHYQAECATFLKCKRKRLIVTLSDDEATSDSESEKIGRALTSTLIENEPSKK 180
           +CHE +G+ H   EC TFLK ++K L V  S+++A+  +              EN  +K+
Sbjct: 121 QCHECEGYGHIMTECTTFLKKQKKSLTVLCSNEDASERN-------------FENNFTKQ 180

Query: 181 GGSNKQKGAI-----TCIDYQGFSLCITSVGCDLARKWEKYQIVLKQQKERIQALIEENH 240
              N   G +     +C +   +   + S     A+  E  Q++ +Q+KE  Q L E ++
Sbjct: 181 --INAMTGRVSSDIESCDEELVYDELVASYKGLYAKSAEICQMLEEQKKENSQLLSERSN 240

Query: 241 HLMSCIAILKVELKEARYNFEYLSKFVKMLTSWTKTLDSILNDGKTRCERKGLGF 275
           HL S I+ L  E++  +   E + K VKM+T+ T TLD +L   + +   KG+GF
Sbjct: 241 HLAS-ISELNDEVRLLKSQLENIMKQVKMMTTGTSTLDEVLK-AQVKENPKGIGF 276

[Close]
BLAST of MELO3C018068 vs. NCBI nr
Match: gi|3777527|gb|AAC64917.1| (gag-pol polyprotein [Glycine max])

HSP 1 Score: 107.1 bits (266), Expect = 5.5e-20
Identity = 95/292 (32.53%), Postives = 135/292 (46.23%), Query Frame = 1 

Query: 1   MKVTTTDEANDVTAMKLDELFGSLRTFELNLGEGNSKKKYGVAFSSVSE--------DVS 60
           MKVT  +EA D+  M++DEL GSL+TFEL L +   KK   +AF S  E        D  
Sbjct: 158 MKVTAIEEAQDICNMRVDELIGSLQTFELGLSDRTEKKSKNLAFVSNDEGEEDEYDLDTD 217

Query: 61  QSLKEHISKENLAKQINYLSSN---------NSINLNIRRENEKGDRESRFSKNDRSSRS 120
           + L   +    L KQ N + +           +I  +IR+ +E    + R  +    S+ 
Sbjct: 218 EGLTNAVVL--LGKQFNKVLNRMDRRQKPHVRNIPFDIRKGSE---YQKRSDEKPSHSKG 277

Query: 121 IRCHEYDGFEHYQAECATFLKCKRKRLIVTLSDD-EATSDSESEKIGRALTSTLIENEPS 180
           I+CH  +G+ H +AEC T LK +RK L V  SDD E+  +S+S++   ALT      E S
Sbjct: 278 IQCHGCEGYGHIKAECPTHLKKQRKGLSVCRSDDTESEQESDSDRDVNALTGRFESAEDS 337

Query: 181 KKGGSNKQKGAITCIDYQGFSLCITSVGCDLARKWEKYQIVLKQQKERIQALIEENHHLM 240
               S      +  I Y+   LCI S         EK      Q K+ I  L  E     
Sbjct: 338 SDTDSEITFDEL-AISYR--ELCIKS---------EKILQQEAQLKKVIANLEAEKEAHE 397

Query: 241 SCIAILKVELKEARYNFEYLSKFVKMLTSWTKTLDSILNDGKTRCERKGLGF 275
             I+ LK E+       E ++K +KML   +  LD +L  GK    ++GLGF
Sbjct: 398 DEISELKGEIGFLNSKLENMTKSIKMLNKGSDLLDEVLQLGKNVGNQRGLGF 432

[Close]
BLAST of MELO3C018068 vs. NCBI nr
Match: gi|29423276|gb|AAO73525.1| (gag-pol polyprotein [Glycine max])

HSP 1 Score: 107.1 bits (266), Expect = 5.5e-20
Identity = 95/292 (32.53%), Postives = 137/292 (46.92%), Query Frame = 1 

Query: 1   MKVTTTDEANDVTAMKLDELFGSLRTFELNLGEGNSKKKYGVAFSSVSE--------DVS 60
           MKVT  +EA D+  M++DEL GSL+TFEL L + N KK   +AF S  E        D  
Sbjct: 186 MKVTAIEEAQDICNMRVDELIGSLQTFELGLSDRNEKKSKNLAFVSNDEGEEDEYDLDTD 245

Query: 61  QSLKEHISKENLAKQINYLSSN---------NSINLNIRRENEKGDRESRFSKNDRSSRS 120
           + L   +    L KQ N + +           +I  +IR+ +E      +  +    S+ 
Sbjct: 246 EGLTNAVGL--LGKQFNKVLNRMDRRQKPHVRNIPFDIRKGSE---YHKKSDEKPSHSKG 305

Query: 121 IRCHEYDGFEHYQAECATFLKCKRKRLIVTLSDD-EATSDSESEKIGRALTSTLIENEPS 180
           I+CH  +G+ H +AEC T LK +RK L V  SDD E+  +S+S++   ALT     +E S
Sbjct: 306 IQCHGCEGYGHIKAECPTHLKKQRKGLSVCRSDDTESEQESDSDRDVNALTGRFESDEDS 365

Query: 181 KKGGSNKQKGAITCIDYQGFSLCITSVGCDLARKWEKYQIVLKQQKERIQALIEENHHLM 240
                   + AI+   Y+   LCI S         EK      Q K+ I  L  E     
Sbjct: 366 SDIEITFDELAIS---YR--KLCIKS---------EKILQQEAQLKKVIANLEAEKEAHE 425

Query: 241 SCIAILKVELKEARYNFEYLSKFVKMLTSWTKTLDSILNDGKTRCERKGLGF 275
             I+ LK E+       E ++K +KML   +  LD +L  GK    ++GLGF
Sbjct: 426 EEISELKGEVGFLNSKLENMTKSIKMLNKGSDMLDEVLQLGKNVGNQRGLGF 458

The following BLAST results are available for this feature:
BLAST of MELO3C018068 vs. TrEMBL
Match NameE-valueIdentityDescription
W9R3W7_9ROSA1.0e-2530.23Receptor-like protein 12 OS=Morus notabilis GN=L484_021844 PE=4 SV=1[more]
A0A072USV5_MEDTR1.7e-2029.15Envelope-like protein, putative OS=Medicago truncatula GN=MTR_3g009370 PE=4 SV=1[more]
O65147_SOYBN3.8e-2032.53Gag-pol polyprotein OS=Glycine max GN=pol PE=4 SV=2[more]
Q84VI0_SOYBN3.8e-2032.53Gag-pol polyprotein OS=Glycine max GN=gag-pol PE=4 SV=1[more]
Q84VH8_SOYBN1.5e-1931.49Gag-pol polyprotein OS=Glycine max GN=gag-pol PE=4 SV=1[more]
BLAST of MELO3C018068 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G05360.17.2e-1028.34 Zinc knuckle (CCHC-type) family protein[more]
BLAST of MELO3C018068 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659109365|ref|XP_008454677.1|3.8e-3735.29PREDICTED: uncharacterized protein LOC103495033 [Cucumis melo][more]
gi|703072544|ref|XP_010089312.1|1.5e-2530.23Receptor-like protein 12 [Morus notabilis][more]
gi|922376962|ref|XP_013458827.1|2.5e-2029.15envelope-like protein, putative [Medicago truncatula][more]
gi|3777527|gb|AAC64917.1|5.5e-2032.53gag-pol polyprotein [Glycine max][more]
gi|29423276|gb|AAO73525.1|5.5e-2032.53gag-pol polyprotein [Glycine max][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003824 catalytic activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C018068T1MELO3C018068T1mRNA


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 197..217
scor

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C018068Wild cucumber (PI 183967)cpimeB201
MELO3C018068Cucumber (Chinese Long) v2cumeB208
MELO3C018068Cucumber (Chinese Long) v3cucmeB207