MELO3C018067 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C018067
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Zinc finger family protein
Location	chr4 : 11301816 .. 11302418 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACCCTGACCTTATTCCAACAACCACCACCGTCGCTGCCACTACCGACCAACACCAGAGTTCAAAAACAACAACCGAAGAGACCGATCAAATCAACAACGAAATGGGTAGTGGGCGCTCCTACGAGTGCGTATTTTGCAAACGAGGGTTTACGACGGCTCAAGCCCTAGGTGGCCACATGAACATCCACCGCAAAGACCGTGTTAAAACCAAGCCTAATACCCCTTCTAAGCCTGAACCCTTCAGCAACCATTCTTCAAATCTTCGCCCAATGTTGACGACGACTGCGGCAGCCACGACAATATCTCATCACCAATCTTTTCAAACCTATTTCCCCACTTCTTCCACTTGGTGTTTGGGTACTACTACTTCATCACCACCTCACGATCATCAATTCTCATATGTACATAACAACCCTCAAGTTTTGAATACTTTCAAAGATCAAAATTGGACGACAACGAACATGAGCCTCGCCTCACAGTCGTCGCCTACCCTTGCCTTGAGTGATCGTCGAGACAAGAGATCAGATCGCAATGGTGGTGATGACGAGGACGATGATGAAGAACTTGATTTGGAGCTTCGACTCGGGCATGATCGGTAG

mRNA sequence

ATGGACCCTGACCTTATTCCAACAACCACCACCGTCGCTGCCACTACCGACCAACACCAGAGTTCAAAAACAACAACCGAAGAGACCGATCAAATCAACAACGAAATGGGTAGTGGGCGCTCCTACGAGTGCGTATTTTGCAAACGAGGGTTTACGACGGCTCAAGCCCTAGGTGGCCACATGAACATCCACCGCAAAGACCGTGTTAAAACCAAGCCTAATACCCCTTCTAAGCCTGAACCCTTCAGCAACCATTCTTCAAATCTTCGCCCAATGTTGACGACGACTGCGGCAGCCACGACAATATCTCATCACCAATCTTTTCAAACCTATTTCCCCACTTCTTCCACTTGGTGTTTGGGTACTACTACTTCATCACCACCTCACGATCATCAATTCTCATATGTACATAACAACCCTCAAGTTTTGAATACTTTCAAAGATCAAAATTGGACGACAACGAACATGAGCCTCGCCTCACAGTCGTCGCCTACCCTTGCCTTGAGTGATCGTCGAGACAAGAGATCAGATCGCAATGGTGGTGATGACGAGGACGATGATGAAGAACTTGATTTGGAGCTTCGACTCGGGCATGATCGGTAG

Coding sequence (CDS)

ATGGACCCTGACCTTATTCCAACAACCACCACCGTCGCTGCCACTACCGACCAACACCAGAGTTCAAAAACAACAACCGAAGAGACCGATCAAATCAACAACGAAATGGGTAGTGGGCGCTCCTACGAGTGCGTATTTTGCAAACGAGGGTTTACGACGGCTCAAGCCCTAGGTGGCCACATGAACATCCACCGCAAAGACCGTGTTAAAACCAAGCCTAATACCCCTTCTAAGCCTGAACCCTTCAGCAACCATTCTTCAAATCTTCGCCCAATGTTGACGACGACTGCGGCAGCCACGACAATATCTCATCACCAATCTTTTCAAACCTATTTCCCCACTTCTTCCACTTGGTGTTTGGGTACTACTACTTCATCACCACCTCACGATCATCAATTCTCATATGTACATAACAACCCTCAAGTTTTGAATACTTTCAAAGATCAAAATTGGACGACAACGAACATGAGCCTCGCCTCACAGTCGTCGCCTACCCTTGCCTTGAGTGATCGTCGAGACAAGAGATCAGATCGCAATGGTGGTGATGACGAGGACGATGATGAAGAACTTGATTTGGAGCTTCGACTCGGGCATGATCGGTAG

Protein sequence

MDPDLIPTTTTVAATTDQHQSSKTTTEETDQINNEMGSGRSYECVFCKRGFTTAQALGGHMNIHRKDRVKTKPNTPSKPEPFSNHSSNLRPMLTTTAAATTISHHQSFQTYFPTSSTWCLGTTTSSPPHDHQFSYVHNNPQVLNTFKDQNWTTTNMSLASQSSPTLALSDRRDKRSDRNGGDDEDDDEELDLELRLGHDR*

Homology

[Close]

BLAST of MELO3C018067 vs. Swiss-Prot
Match: SUP_ARATH (Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana GN=SUP PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 3.5e-10
Identity = 58/173 (33.53%), Postives = 76/173 (43.93%), Query Frame = 1


Query: 40  RSYECVFCKRGFTTAQALGGHMNIHRKDRVK-------TKPNTPSKPEPFSNHSSNLRPM 99
           RSY C FCKR F +AQALGGHMN+HR+DR +       +  +TPS P P  N+S      
Sbjct: 45  RSYTCSFCKREFRSAQALGGHMNVHRRDRARLRLQQSPSSSSTPSPPYPNPNYS------ 104

Query: 100 LTTTAAATTISHHQSFQTYFPTSSTWCLGTTTSSPPHDHQFSYVHNNPQVLNTFKDQNWT 159
             +T A +   HH    T FPT S         S P          +P+  +T ++   T
Sbjct: 105 -YSTMANSPPPHHSPL-TLFPTLS-------PPSSPRYRAGLIRSLSPKSKHTPENACKT 164

Query: 160 TTNMSLASQSSPTLALSDRRDK--RSDR------NGGDDEDDDEELDLELRLG 198
             +  L      T   S    K  R+D         G   + +++LDLELRLG
Sbjct: 165 KKSSLLVEAGEATRFTSKDACKILRNDEIISLELEIGLINESEQDLDLELRLG 202

[Close]

BLAST of MELO3C018067 vs. Swiss-Prot
Match: TAC1_ARATH (Transcriptional regulator TAC1 OS=Arabidopsis thaliana GN=TAC1 PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 5.6e-08
Identity = 24/41 (58.54%), Postives = 29/41 (70.73%), Query Frame = 1


Query: 32 INNEMGSGRSYECVFCKRGFTTAQALGGHMNIHRKDRVKTK 73
          +++ +   RSY C FC RGF+ AQALGGHMNIHR+DR K +
Sbjct: 25 VDDSLNQSRSYVCSFCIRGFSNAQALGGHMNIHRRDRAKLR 65

[Close]

BLAST of MELO3C018067 vs. Swiss-Prot
Match: GIS_ARATH (Zinc finger protein GIS OS=Arabidopsis thaliana GN=GIS PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.1e-07
Identity = 49/180 (27.22%), Postives = 74/180 (41.11%), Query Frame = 1


Query: 9   TTTVAATTDQHQS-SKTTTEETDQI------NNEMGSGRSYECVFCKRGFTTAQALGGHM 68
           TT     TD +Q+ +K   EE DQ       NN +   R +EC +C R F T+QALGGH 
Sbjct: 51  TTGQEDYTDPYQTKNKEEEEEEDQTGDNSTDNNSISHNRRFECHYCFRNFPTSQALGGHQ 110

Query: 69  NIHRKDRVKTKPNTPSKPEPFSNHSSNLRPMLTTTAAATTISHHQSFQTYFPTSSTWCLG 128
           N H+++R   K    S      N+  + R   + T    T +      +  P  S +   
Sbjct: 111 NAHKRERQLAKRGVSSYFYHPDNNPYSYRHYPSWTNGPLTAARSYGGFSSGPKPSGY--- 170

Query: 129 TTTSSPPHDHQFSYVHNNPQVLNTFKDQNWTTTNMSLASQSSPTLALSDRRDKRSDRNGG 182
              + P +  Q       P+V   +      T+N S +S +S    L+  + + S + GG
Sbjct: 171 --YTRPSYGSQLGLWRLPPRVQGVYNSNAAFTSNGSSSSSNSTLPLLTRSQTQLSSQVGG 225

[Close]

BLAST of MELO3C018067 vs. Swiss-Prot
Match: RBE_ARATH (Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana GN=RBE PE=2 SV=2)

HSP 1 Score: 54.3 bits (129), Expect = 1.8e-06
Identity = 23/38 (60.53%), Postives = 26/38 (68.42%), Query Frame = 1


Query: 40 RSYECVFCKRGFTTAQALGGHMNIHRKDRVKTKPNTPS 78
          RSY C FC R F +AQALGGHMN+HR+DR + K  + S
Sbjct: 53 RSYSCSFCGREFKSAQALGGHMNVHRRDRARLKQQSLS 90

[Close]

BLAST of MELO3C018067 vs. TrEMBL
Match: A0A0A0LD93_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G426920 PE=4 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 1.1e-58
Identity = 112/138 (81.16%), Postives = 121/138 (87.68%), Query Frame = 1


Query: 1   MDPDLIPTTTTVAATT--DQHQSSKTTTEETDQINNEMGSGRSYECVFCKRGFTTAQALG 60
           MDPD IPTTTT+AATT  DQ QSSK TTE+TDQINNEMGSGRSYECVFCKRGFTTAQALG
Sbjct: 1   MDPDHIPTTTTIAATTTTDQDQSSKPTTEDTDQINNEMGSGRSYECVFCKRGFTTAQALG 60

Query: 61  GHMNIHRKDRVKTKPNTPSKPEPFSNHSSNLRPMLTTTAAATTISHHQSFQTYFPTSSTW 120
           GHMNIHRKDRVK KPNTPSKPEPF+NHSS LRPMLTTTAA TT+SHHQSFQTYFPTSSTW
Sbjct: 61  GHMNIHRKDRVKNKPNTPSKPEPFTNHSSTLRPMLTTTAAVTTVSHHQSFQTYFPTSSTW 120

Query: 121 CLGTTTSSPPHDHQFSYV 137
           CLG+      ++ + + V
Sbjct: 121 CLGSKLDDNQYEPRLAVV 138

[Close]

BLAST of MELO3C018067 vs. TrEMBL
Match: A0A0D2P8X6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G144000 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.2e-28
Identity = 83/192 (43.23%), Postives = 114/192 (59.38%), Query Frame = 1


Query: 15  TTDQHQSSKTTTEETD---QINNEMGSGRSYECVFCKRGFTTAQALGGHMNIHRKDRVK- 74
           T  QH+ SK+++EE+D   Q N+++GSGRSYECVFCKRGFTTAQALGGHMNIHRKDR K 
Sbjct: 3   TNHQHEDSKSSSEESDRSEQSNDDVGSGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKS 62

Query: 75  TKPNT---PSKPEPFSNHSSNLRPMLTTTAAATTISHHQSFQTYFPTSSTWCLGTTTSSP 134
           ++PN+    S      N++S            +   H+ S+Q +FP SS W        P
Sbjct: 63  SRPNSVPIVSGKVDDENYASLRSSSSYLPIIQSYQPHYVSYQAFFPASSGW--DFRPPHP 122

Query: 135 PHDHQFSYVHNNPQVLNTFKDQNWTTTNMSLASQSSPTLALSDRRDKRSDRNGGDDEDDD 194
           PH  +  +V+N+ + LN F++++W   N++L    S         D+    + G  +DD 
Sbjct: 123 PHGDEL-FVNNSSRYLNPFREEDW-PRNLNLRIGPSHV-------DENKKIDHGSSQDD- 181

Query: 195 EELDLELRLGHD 200
            ELDLELRLGHD
Sbjct: 183 -ELDLELRLGHD 181

[Close]

BLAST of MELO3C018067 vs. TrEMBL
Match: B9GS39_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s04250g PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 3.2e-26
Identity = 80/193 (41.45%), Postives = 114/193 (59.07%), Query Frame = 1


Query: 16  TDQH-QSSKTTTEE---TDQINNEMGSGRSYECVFCKRGFTTAQALGGHMNIHRKDRVKT 75
           ++QH + SK++++E   TD+ + + G+GRSYECVFCKRGFTTAQALGGHMNIHRKDR K+
Sbjct: 3   SNQHDEDSKSSSDEEEITDRSDQDTGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKS 62

Query: 76  KPNT-PSKPEPFSNHSSNLR--PMLTTTAAATTISH--HQSFQTYFPTSSTWCLGTTTSS 135
           +P++ PS         ++ +  P + +        H  H ++QT+FP S+TW +G   S 
Sbjct: 63  RPSSVPSLSSKVDEDYASFQGYPPIQSYPPHYPTPHEVHINYQTFFPASTTWGIG---SP 122

Query: 136 PPHDHQFSYVHNNPQVLNTFKDQNWTTTNMSLASQSSPTLALSDRRDKRSDRNGGDDEDD 195
               H   +   +P  L  F D +W     SL+ Q+ P+    + ++K  D  G DD   
Sbjct: 123 YAQQHNGDFYVQSPHHLYPFGD-DW---RRSLSLQTGPSHVDDNTKEKIEDGIGADD--- 182

Query: 196 DEELDLELRLGHD 200
             ELDLELRLGHD
Sbjct: 183 --ELDLELRLGHD 183

[Close]

BLAST of MELO3C018067 vs. TrEMBL
Match: B9H8J6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s24290g PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 4.1e-26
Identity = 80/188 (42.55%), Postives = 104/188 (55.32%), Query Frame = 1


Query: 17  DQHQSSKTTTEETDQINNEMGSGRSYECVFCKRGFTTAQALGGHMNIHRKDRVKTKPNT- 76
           D+   S +  E TD+   + G+GRSYECVFCKRGFTTAQALGGHMNIHRKDR K++P++ 
Sbjct: 8   DEDSKSSSDEEITDRSYQDTGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKSRPSSV 67

Query: 77  PSKPEPFSNHSSNLR--PMLTTTAAATTISH--HQSFQTYFPTSSTWCLGTTTSSPPHDH 136
           PS          + R  P L +  A     H  H ++QT+FP SSTW +G   S     H
Sbjct: 68  PSFSSKVDEDFPSFRGYPPLQSYPAHYPTPHEVHTNYQTFFPLSSTWGIG---SPYAQQH 127

Query: 137 QFSYVHNNPQVLNTFKDQNWTTTNMSLASQSSPTLALSDRRDKRSDRNGGDDEDDDEELD 196
              +    PQ L  F +        SL+ Q  P+    + ++K  +   G + DDD  LD
Sbjct: 128 NGDFYAQTPQHLYPFGED---ICRGSLSQQIDPSHVDDNTKEKIEE---GSEADDD--LD 184

Query: 197 LELRLGHD 200
           LELRLGHD
Sbjct: 188 LELRLGHD 184

[Close]

BLAST of MELO3C018067 vs. TrEMBL
Match: A0A061DQ22_THECC (C2H2 and C2HC zinc fingers superfamily protein, putative OS=Theobroma cacao GN=TCM_004127 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 2.7e-25
Identity = 81/195 (41.54%), Postives = 114/195 (58.46%), Query Frame = 1


Query: 17  DQHQSSKTTTEETD---QINNEMGSGRSYECVFCKRGFTTAQALGGHMNIHRKDRVKTKP 76
           +Q + SK+++EETD   Q N++MG+GRSYECVFCKRGFTTAQALGGHMNIHRKDR K++P
Sbjct: 4   NQLEDSKSSSEETDRSEQSNDDMGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKSRP 63

Query: 77  NT----PSKPEPFSNHSS----NLRPMLTTTAAATTISHHQSFQTYFPTSSTWCLGTTTS 136
           ++      K +   N++S    +  P+ +    +     H S+Q +FP    W       
Sbjct: 64  SSVPIVSGKADENLNYASLMSYSYPPIQSQPHYSMVPEVHVSYQAFFPAPG-WGF----- 123

Query: 137 SPPHDHQFSYVH-NNPQVLNTFKDQNWTTTNMSLASQSSPTLALSDRRDKRSDRNGGDDE 196
            PPH H    ++ +N Q LN F  ++W +   SL  +  P+     R D  + +  G  +
Sbjct: 124 RPPHTHHSDELYVDNSQHLNPF-GEDWPS---SLNLRIGPS-----RVDDENKKTDGSSQ 181

Query: 197 DDDEELDLELRLGHD 200
           +D  ELDLELRLGHD
Sbjct: 184 ED--ELDLELRLGHD 181

[Close]

BLAST of MELO3C018067 vs. TAIR10
Match: AT3G23140.1 (AT3G23140.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 68.6 bits (166), Expect = 5.2e-12
Identity = 56/176 (31.82%), Postives = 83/176 (47.16%), Query Frame = 1


Query: 31  QINNEMGSG---RSYECVFCKRGFTTAQALGGHMNIHRKDRVKTKPNTPSKPE-PFSNHS 90
           QI++  GSG   R+Y+C  CKRGFT  QALGGH NIHR++R +   ++ S    PFS   
Sbjct: 7   QIDSGSGSGENRRTYDCDICKRGFTNPQALGGHNNIHRRERERYPSSSSSSHSFPFS--- 66

Query: 91  SNLRPMLTTTAAATTISHHQSFQTYFPTSSTWCL--GTTTSSPPHDHQFSYVHNNPQVLN 150
               P+ + + +++T  +  +   YFPT  ++         +P H+ Q+    ++ +   
Sbjct: 67  ---LPLPSQSPSSST--NFTNPPPYFPTIESYLHQGSQPPINPSHNTQYFGSSSSSRGGG 126

Query: 151 TFKDQNWTTTNMSLASQSSPTLALSDRRDKRSDRNGGDDEDDDEELDLELRLGHDR 201
            F        N+SL   S       D    RS    G  +  D +LDL+LRLG  R
Sbjct: 127 RFAQGASHDLNLSLGLGSMN----EDDDTHRSPPETGGSQPQDGDLDLDLRLGGHR 170

[Close]

BLAST of MELO3C018067 vs. TAIR10
Match: AT3G23130.1 (AT3G23130.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 66.6 bits (161), Expect = 2.0e-11
Identity = 58/173 (33.53%), Postives = 76/173 (43.93%), Query Frame = 1


Query: 40  RSYECVFCKRGFTTAQALGGHMNIHRKDRVK-------TKPNTPSKPEPFSNHSSNLRPM 99
           RSY C FCKR F +AQALGGHMN+HR+DR +       +  +TPS P P  N+S      
Sbjct: 45  RSYTCSFCKREFRSAQALGGHMNVHRRDRARLRLQQSPSSSSTPSPPYPNPNYS------ 104

Query: 100 LTTTAAATTISHHQSFQTYFPTSSTWCLGTTTSSPPHDHQFSYVHNNPQVLNTFKDQNWT 159
             +T A +   HH    T FPT S         S P          +P+  +T ++   T
Sbjct: 105 -YSTMANSPPPHHSPL-TLFPTLS-------PPSSPRYRAGLIRSLSPKSKHTPENACKT 164

Query: 160 TTNMSLASQSSPTLALSDRRDK--RSDR------NGGDDEDDDEELDLELRLG 198
             +  L      T   S    K  R+D         G   + +++LDLELRLG
Sbjct: 165 KKSSLLVEAGEATRFTSKDACKILRNDEIISLELEIGLINESEQDLDLELRLG 202

[Close]

BLAST of MELO3C018067 vs. TAIR10
Match: AT4G17810.1 (AT4G17810.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 66.2 bits (160), Expect = 2.6e-11
Identity = 57/205 (27.80%), Postives = 86/205 (41.95%), Query Frame = 1


Query: 17  DQHQSSKTTTEETDQINNEMGSG---RSYECVFCKRGFTTAQALGGHMNIHRKDRVKTKP 76
           D  +S +    E D   N  G+    RSY C FC+R F +AQALGGHMN+HR+DR  ++ 
Sbjct: 18  DDDESWEVKAFEQDTKGNISGTTWPPRSYTCNFCRREFRSAQALGGHMNVHRRDRASSRA 77

Query: 77  NTPSKPEPFSNHSSNLRPMLTTTAAATTISHH----QSFQTYFPTSSTWCLGTTTSSPPH 136
           +  S                 T AAA    H      S     PT++     T ++    
Sbjct: 78  HQGS-----------------TVAAAARSGHGGMLLNSCAPPLPTTTLIIQSTASNIEGL 137

Query: 137 DHQFSYVH------NNPQVLNTFKDQNWTTTNMSLASQSSPTLALSDRRDKRSDRNGGDD 196
            H +   +      N+  ++N +   ++  +N+  +  +SP     +   +  + + GDD
Sbjct: 138 SHFYQLQNPSGIFGNSGDMVNLYGTTSFPPSNLPFSMLNSPV----EVPPRLIEYSTGDD 197

Query: 197 ED----------DDEELDLELRLGH 199
           E             +ELDLELRLGH
Sbjct: 198 ESIGSMKEATGTSVDELDLELRLGH 201

[Close]

BLAST of MELO3C018067 vs. TAIR10
Match: AT5G43540.1 (AT5G43540.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 64.7 bits (156), Expect = 7.5e-11
Identity = 31/58 (53.45%), Postives = 36/58 (62.07%), Query Frame = 1


Query: 20 QSSKTTTEETDQINNEMGSG--------RSYECVFCKRGFTTAQALGGHMNIHRKDRV 70
          +SS +T+ ET  + +   S         R YEC FCKRGFT AQALGGHMNIHR+DR+
Sbjct: 5  RSSSSTSSETGAVRHRRTSSSSVSTVTRRMYECTFCKRGFTNAQALGGHMNIHRRDRL 62

[Close]

BLAST of MELO3C018067 vs. TAIR10
Match: AT2G42410.1 (AT2G42410.1 zinc finger protein 11)

HSP 1 Score: 63.2 bits (152), Expect = 2.2e-10
Identity = 36/95 (37.89%), Postives = 52/95 (54.74%), Query Frame = 1


Query: 40  RSYECVFCKRGFTTAQALGGHMNIHRKDRVKTK--PNTPSKP-------EPFSNHSSNLR 99
           ++Y C FC+R F +AQALGGHMN+HR+DR K +  P+   +P        P  N SS+  
Sbjct: 47  KNYTCSFCRREFRSAQALGGHMNVHRRDRAKLRQIPSWLFEPHHHTPIANPNPNFSSSSS 106

Query: 100 PMLTTTAAATTISHHQSFQTYFPTSSTWCLGTTTS 126
              TT     ++++ +S  T FP++    L +TTS
Sbjct: 107 SSTTTAHLEPSLTNQRSKTTPFPSARFDLLDSTTS 141

[Close]

BLAST of MELO3C018067 vs. NCBI nr
Match: gi|659109033|ref|XP_008454512.1| (PREDICTED: transcriptional regulator SUPERMAN-like [Cucumis melo])

HSP 1 Score: 419.5 bits (1077), Expect = 3.4e-114
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 1


Query: 1   MDPDLIPTTTTVAATTDQHQSSKTTTEETDQINNEMGSGRSYECVFCKRGFTTAQALGGH 60
           MDPDLIPTTTTVAATTDQHQSSKTTTEETDQINNEMGSGRSYECVFCKRGFTTAQALGGH
Sbjct: 1   MDPDLIPTTTTVAATTDQHQSSKTTTEETDQINNEMGSGRSYECVFCKRGFTTAQALGGH 60

Query: 61  MNIHRKDRVKTKPNTPSKPEPFSNHSSNLRPMLTTTAAATTISHHQSFQTYFPTSSTWCL 120
           MNIHRKDRVKTKPNTPSKPEPFSNHSSNLRPMLTTTAAATTISHHQSFQTYFPTSSTWCL
Sbjct: 61  MNIHRKDRVKTKPNTPSKPEPFSNHSSNLRPMLTTTAAATTISHHQSFQTYFPTSSTWCL 120

Query: 121 GTTTSSPPHDHQFSYVHNNPQVLNTFKDQNWTTTNMSLASQSSPTLALSDRRDKRSDRNG 180
           GTTTSSPPHDHQFSYVHNNPQVLNTFKDQNWTTTNMSLASQSSPTLALSDRRDKRSDRNG
Sbjct: 121 GTTTSSPPHDHQFSYVHNNPQVLNTFKDQNWTTTNMSLASQSSPTLALSDRRDKRSDRNG 180

Query: 181 GDDEDDDEELDLELRLGHDR 201
           GDDEDDDEELDLELRLGHDR
Sbjct: 181 GDDEDDDEELDLELRLGHDR 200

[Close]

BLAST of MELO3C018067 vs. NCBI nr
Match: gi|449462920|ref|XP_004149183.1| (PREDICTED: transcriptional regulator SUPERMAN-like [Cucumis sativus])

HSP 1 Score: 387.9 bits (995), Expect = 1.1e-104
Identity = 186/202 (92.08%), Postives = 191/202 (94.55%), Query Frame = 1


Query: 1   MDPDLIPTTTTVAATT--DQHQSSKTTTEETDQINNEMGSGRSYECVFCKRGFTTAQALG 60
           MDPD IPTTTT+AATT  DQ QSSK TTE+TDQINNEMGSGRSYECVFCKRGFTTAQALG
Sbjct: 1   MDPDHIPTTTTIAATTTTDQDQSSKPTTEDTDQINNEMGSGRSYECVFCKRGFTTAQALG 60

Query: 61  GHMNIHRKDRVKTKPNTPSKPEPFSNHSSNLRPMLTTTAAATTISHHQSFQTYFPTSSTW 120
           GHMNIHRKDRVK KPNTPSKPEPF+NHSS LRPMLTTTAA TT+SHHQSFQTYFPTSSTW
Sbjct: 61  GHMNIHRKDRVKNKPNTPSKPEPFTNHSSTLRPMLTTTAAVTTVSHHQSFQTYFPTSSTW 120

Query: 121 CLGTTTSSPPHDHQFSYVHNNPQVLNTFKDQNWTTTNMSLASQSSPTLALSDRRDKRSDR 180
           CLGTTTSSPPHDHQFSYVHNNPQVLNTFKDQNWTTTNMSLASQSSPTLALSD RDKRSD 
Sbjct: 121 CLGTTTSSPPHDHQFSYVHNNPQVLNTFKDQNWTTTNMSLASQSSPTLALSDGRDKRSDG 180

Query: 181 NGGDDEDDDEELDLELRLGHDR 201
           NGGDD+D DEELDLELRLGHDR
Sbjct: 181 NGGDDDDGDEELDLELRLGHDR 202

[Close]

BLAST of MELO3C018067 vs. NCBI nr
Match: gi|700202873|gb|KGN58006.1| (hypothetical protein Csa_3G426920 [Cucumis sativus])

HSP 1 Score: 234.6 bits (597), Expect = 1.5e-58
Identity = 112/138 (81.16%), Postives = 121/138 (87.68%), Query Frame = 1


Query: 1   MDPDLIPTTTTVAATT--DQHQSSKTTTEETDQINNEMGSGRSYECVFCKRGFTTAQALG 60
           MDPD IPTTTT+AATT  DQ QSSK TTE+TDQINNEMGSGRSYECVFCKRGFTTAQALG
Sbjct: 1   MDPDHIPTTTTIAATTTTDQDQSSKPTTEDTDQINNEMGSGRSYECVFCKRGFTTAQALG 60

Query: 61  GHMNIHRKDRVKTKPNTPSKPEPFSNHSSNLRPMLTTTAAATTISHHQSFQTYFPTSSTW 120
           GHMNIHRKDRVK KPNTPSKPEPF+NHSS LRPMLTTTAA TT+SHHQSFQTYFPTSSTW
Sbjct: 61  GHMNIHRKDRVKNKPNTPSKPEPFTNHSSTLRPMLTTTAAVTTVSHHQSFQTYFPTSSTW 120

Query: 121 CLGTTTSSPPHDHQFSYV 137
           CLG+      ++ + + V
Sbjct: 121 CLGSKLDDNQYEPRLAVV 138

[Close]

BLAST of MELO3C018067 vs. NCBI nr
Match: gi|823188921|ref|XP_012490668.1| (PREDICTED: zinc finger protein KNUCKLES-like isoform X1 [Gossypium raimondii])

HSP 1 Score: 134.8 bits (338), Expect = 1.7e-28
Identity = 83/192 (43.23%), Postives = 114/192 (59.38%), Query Frame = 1


Query: 15  TTDQHQSSKTTTEETD---QINNEMGSGRSYECVFCKRGFTTAQALGGHMNIHRKDRVK- 74
           T  QH+ SK+++EE+D   Q N+++GSGRSYECVFCKRGFTTAQALGGHMNIHRKDR K 
Sbjct: 3   TNHQHEDSKSSSEESDRSEQSNDDVGSGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKS 62

Query: 75  TKPNT---PSKPEPFSNHSSNLRPMLTTTAAATTISHHQSFQTYFPTSSTWCLGTTTSSP 134
           ++PN+    S      N++S            +   H+ S+Q +FP SS W        P
Sbjct: 63  SRPNSVPIVSGKVDDENYASLRSSSSYLPIIQSYQPHYVSYQAFFPASSGW--DFRPPHP 122

Query: 135 PHDHQFSYVHNNPQVLNTFKDQNWTTTNMSLASQSSPTLALSDRRDKRSDRNGGDDEDDD 194
           PH  +  +V+N+ + LN F++++W   N++L    S         D+    + G  +DD 
Sbjct: 123 PHGDEL-FVNNSSRYLNPFREEDW-PRNLNLRIGPSHV-------DENKKIDHGSSQDD- 181

Query: 195 EELDLELRLGHD 200
            ELDLELRLGHD
Sbjct: 183 -ELDLELRLGHD 181

[Close]

BLAST of MELO3C018067 vs. NCBI nr
Match: gi|823188924|ref|XP_012490669.1| (PREDICTED: zinc finger protein KNUCKLES-like isoform X2 [Gossypium raimondii])

HSP 1 Score: 127.1 bits (318), Expect = 3.5e-26
Identity = 80/189 (42.33%), Postives = 111/189 (58.73%), Query Frame = 1


Query: 15  TTDQHQSSKTTTEETD---QINNEMGSGRSYECVFCKRGFTTAQALGGHMNIHRKDRVK- 74
           T  QH+ SK+++EE+D   Q N+++GSGRSYECVFCKRGFTTAQALGGHMNIHRKDR K 
Sbjct: 3   TNHQHEDSKSSSEESDRSEQSNDDVGSGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKS 62

Query: 75  TKPNT---PSKPEPFSNHSSNLRPMLTTTAAATTISHHQSFQTYFPTSSTWCLGTTTSSP 134
           ++PN+    S      N++S            +   H+ S+Q +FP SS W        P
Sbjct: 63  SRPNSVPIVSGKVDDENYASLRSSSSYLPIIQSYQPHYVSYQAFFPASSGW--DFRPPHP 122

Query: 135 PHDHQFSYVHNNPQVLNTFKDQNWTTTNMSLASQSSPTLALSDRRDKRSDRNGGDDEDDD 194
           PH  +  +V+N+ + LN F++++W   N++L    S         D+    + G  +DD 
Sbjct: 123 PHGDEL-FVNNSSRYLNPFREEDW-PRNLNLRIGPSHV-------DENKKIDHGSSQDD- 178

Query: 195 EELDLELRL 197
            ELDLELRL
Sbjct: 183 -ELDLELRL 178

The following BLAST results are available for this feature:

BLAST of MELO3C018067 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SUP_ARATH	3.5e-10	33.53	Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana GN=SUP PE=1 SV=1	[more]
TAC1_ARATH	5.6e-08	58.54	Transcriptional regulator TAC1 OS=Arabidopsis thaliana GN=TAC1 PE=2 SV=1	[more]
GIS_ARATH	2.1e-07	27.22	Zinc finger protein GIS OS=Arabidopsis thaliana GN=GIS PE=2 SV=1	[more]
RBE_ARATH	1.8e-06	60.53	Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana GN=RBE PE...	[more]

BLAST of MELO3C018067 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LD93_CUCSA	1.1e-58	81.16	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G426920 PE=4 SV=1	[more]
A0A0D2P8X6_GOSRA	1.2e-28	43.23	Uncharacterized protein OS=Gossypium raimondii GN=B456_007G144000 PE=4 SV=1	[more]
B9GS39_POPTR	3.2e-26	41.45	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s04250g PE=4 SV=1	[more]
B9H8J6_POPTR	4.1e-26	42.55	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s24290g PE=4 SV=1	[more]
A0A061DQ22_THECC	2.7e-25	41.54	C2H2 and C2HC zinc fingers superfamily protein, putative OS=Theobroma cacao GN=T...	[more]

BLAST of MELO3C018067 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G23140.1	5.2e-12	31.82	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT3G23130.1	2.0e-11	33.53	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT4G17810.1	2.6e-11	27.80	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT5G43540.1	7.5e-11	53.45	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT2G42410.1	2.2e-10	37.89	zinc finger protein 11	[more]

BLAST of MELO3C018067 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659109033\|ref\|XP_008454512.1\|	3.4e-114	100.00	PREDICTED: transcriptional regulator SUPERMAN-like [Cucumis melo]	[more]
gi\|449462920\|ref\|XP_004149183.1\|	1.1e-104	92.08	PREDICTED: transcriptional regulator SUPERMAN-like [Cucumis sativus]	[more]
gi\|700202873\|gb\|KGN58006.1\|	1.5e-58	81.16	hypothetical protein Csa_3G426920 [Cucumis sativus]	[more]
gi\|823188921\|ref\|XP_012490668.1\|	1.7e-28	43.23	PREDICTED: zinc finger protein KNUCKLES-like isoform X1 [Gossypium raimondii]	[more]
gi\|823188924\|ref\|XP_012490669.1\|	3.5e-26	42.33	PREDICTED: zinc finger protein KNUCKLES-like isoform X2 [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007087	Zinc finger, C2H2
IPR013087	Znf_C2H2_type

Vocabulary: **Molecular Function**
Term	Definition
GO:0046872	metal ion binding
GO:0003676	nucleic acid binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003676	nucleic acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C018067T1	MELO3C018067T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007087	Zinc finger, C2H2	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 44..64 scor
IPR007087	Zinc finger, C2H2	PROFILE	PS50157	ZINC_FINGER_C2H2_2	coord: 42..69 score: 10
IPR013087	Zinc finger C2H2-type/integrase DNA-binding domain	GENE3D	G3DSA:3.30.160.60		coord: 40..68 score: 5.
None	No IPR available	PANTHER	PTHR26374	FAMILY NOT NAMED	coord: 18..199 score: 8.3
None	No IPR available	PANTHER	PTHR26374:SF211	SUBFAMILY NOT NAMED	coord: 18..199 score: 8.3
None	No IPR available	unknown	SSF57667	beta-beta-alpha zinc fingers	coord: 39..69 score: 2.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C018067	Csa3G426920	Cucumber (Chinese Long) v2	cumeB208
MELO3C018067	CSPI03G23550	Wild cucumber (PI 183967)	cpimeB201
MELO3C018067	CsaV3_3G023340	Cucumber (Chinese Long) v3	cucmeB207

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None