MELO3C017458 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C017458
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Replication protein A 32 kDa subunit-like protein
Location	chr2 : 22092267 .. 22095983 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCGGGAGGGATGGTGAAGTGGTGGGATATCTAGGTTTTACCGAAGCAAAATTTCATTTCTCAAACTGCTCTTCAAACTGCTCTCGATCACTCACTTCGATTCTCTTGTAGGGTTTCATTATTCTTCACTCCTACCTTTACAGGGGAAGAACGATGTATGCAAGTCAATTCGACGGCAACGCTGCCTTCTCCGGTGGTGGATTTATGCCATCTCAGACCACCCAGGCCCCTGATCACTCATTCTCTCCGGCCAAAGTACGTTCTATCTTCATATATAATTTTTAAGTCTCTTTCCGATTCCTTTTACTTACGTATTGATTACTAGTTTCCGCCACTTGAATTTATCACATGCGTTTTTACGTTTTTTCTGACTGAAATTGTTACAACAGTTTGAAATGATTCGTACTTCGATTGCTAATGAGTTGAATAATAGTTCATATATTGTTTGGATTTGAAGTCTGTTTGGTATTTGTGCGGTTATGGCGTTTTTTTTTACTTTTTTGCCTTTAGTATATCCTTCAGAGTTTTGATTATCAACGAAATGAAGACTTATATATGTGTGTGTAATTTGCAGAATCGGGATGTCCAGGCATTGCTTCCATTAACAGTGAAACAGATAAACGACGCATTTCTGTCCAGTGACGATAAATCAAATTTTGTTATTGATGGTGTTGATGTTAACAATGTTAGTCTTGGACTTGTATGTTTTGTTTATTTTATGTATTGAGTTGCTTGTTGAGCTGCATTATGTTCAGGTTAAGCTTGTAGGGATGGTGCGTAATAGAGCAGGAAGAATTACTGATGTGACTTTTGCACTGGACGATGGCACTGGACGGATTGACTGTAGCAAATGGTTTGTTCTTCCCCCCACCACCGCACCCACACCTACACCTCTACAAGATGAGAAAAGTTAAGATTTGTTTCTTGTTGATATTTGTTTTTTTTTTTTCTCTTTTGTGAAATGTGTCTATAGGGTCAATGAAGCTGCGGATTCAAATGAAGTTGAGGGAATATTGTAATGTTCTTTCTACTCTATCTTTAATAACTTTTAAAATATTCCTTGAGGATCGTAATACTTCTGTTGCTGTTATAATATAAAATGTTCATGATTGATTTTTCAACGTTGCCTACTAGAATCTCTTGTGAATTAAGATAGAACTTATGGAACACACCATGTTGTAGACGTGGAGTTATACTGTTCTGTAGTTTGAGAAAAATGAACTATATATCTGCAGCCATTGCTACTACAGGGCATACAAATGTCTCTTTTTTATCTCATCCTTATTGAAGTAGCAAGTATTAATGGAAAGTAGATCCTGCTTGATACCGAGAAGATGGTCGGTTGGTTTTTGTTGGGTAGAAAGGAAGCCAAGACAGGGAGTTGCAGAATTTTGTGGTCGGTAATCGCTAAGGAGGAGAGATCCCAGCTCTCTTGATAGCTGAAAACTTATTACTGTTTTTCTATTCAGTTTTTTTTTCCTGAATTTGAACTTTGTTGGAAGTTTATCAATATAAAAAGTGTGGTTCTTGCATATGTTCTGGTTTGAATGCTGTTTCTTGAAAATAACAGAGGTCTCCATCAACTTGCAATTATCATTCATTGAGATGTTACTTGTGGCTCTTCTGGATTAGTTTCCCTGTTTAACCTGAAATTAAATCTCTTAAACGATCATTTGGGGGACGACTCTGTTTATTTGGACTAATGATGCATTTAATCATCTTTCAGATTTATCCCCTTTCAGCTCATTTAAACATTTTCATGCTTCAGGGATGGCATGTATGTCCGGGTCCATGGCCACTTAAAGAGCTTCCAGGGTAAAAGAACTTTAAATGTCTTTTCTATCAGGTAGTGTATGGTTTTCCCTTAGTTCTTTTCGGGGATTTCTTGCTTTTGTCATTTCTTAGGGATTTGAGTTGTGAGTGCATAAACTGTATGAATGCTGTTCTTGAACTATAGTGGACAATAGTTTATTTTATACTTTTAGCAATTGAATTGAGATGAGGTATTTCATGAGCAGTTTGTTCAACGAAATGAAATTGTTGCAGTGCTTGTTCTTTGCAACTTATGTGCATGATTTCTATACCATTGCGGCGTTGGGATTTTGATATGAAGTATTTGGCTTACAGGCCGGTGACGGACTATAATGAGATCACAAATCACTTCATCGAATCCATATATGTTCATTTTTACAACACCAGATTGCGGGTATTAATCAAGTCATTTCAAATTTTTAGTGATATCTTGATTAGGACTAAAGTAATATTGCTTGCCTTACCTGTTTGCTTTTGGGTTATTGTTTGTGCTGTACTGATAGAAACAACAAAGTAGTAGTATGACTACTCAGCCACAGATGACAAATCTATCTAATACGCCCGTGAAAGGATATCAAGCTCCCATTGCAAATCAAGTAAGATCCTTATTCAATTCACGTGTGCTGGGCTACGGTTTACTTATGCAACCTTCTAATGAGCTGTTTTCAGTACACTGGTCAAGCAGGCGGTGATAGTTGGAAGAGCCTTGAGCAGATGGTCTTAGATTTTCTGCAACTTCCTTCATGCGAGTAAGTGCCTTCTTAACAATGATGCAATTCTTTTCATTTCATCCTCCCTATTTTCATTTTCGTGCTTGTTAGTCTTGAATTTGCAATCTAGATGCATAGTTAAGAAAATAGATGGTTTCTAAGTTGTTTTCTTTCCTCATACATGTATATCTTTTTGGTTTTGATGGCCGATGAATGTTTTTTTTTCTCGTCCCTTTTTCTCTCTTTCATGAATAGATGACTAACTTCTTTGAGACTCGGCCCCCATAGCTTGGTGAATTGTTTATTATACTTGTTAGGATTCTTAAATGACCCAAGCACCACCAGGAAAAGGTTTTTCCTAGATGAGAATTATTCGGAAGAGCTGTAGTCCTAATCTAACAAATTGGTCTTTCCTTTTTCTGGAGTAGAGGAGCAGTGTATCTACTTAAGTATAGAATTGTACAACATAAACGAAGCCTAGAACGCTTCTCTCACTGGTTTCTTTCCCTGCTCATCGATTTCTTAGTTTAGATTTATTATTACAGTCTCTATACATTTATTTTGTATGTAGTTCTGAAAGAGGCGCACACCGTGATGTCATTGCTCAACAGCTCAAAGTTCCACTAGAGAAGCTCATGTATTACTCTCTCCTCTCACAGTAAAACTTATCTTGCAAGTTAGGATTGTAACTTAAAATTTACCATTTTTGTTATTGTTTTGCAGTCCGGCGATGAAAAATCTAGAAGAGGAAGGCCTAATCTACTCAACAACCGATGATTACCACTTCAAATCAACCGCCAACGGTTGACGTTTCTATTATGGTAACTAACGAATTGAAGTGAAGTTTTTTTCAGTGCCGTTGTTTCGCTTCATCTATAGTTTAAGTTGGGTAAATCACTGTGGTCAAAATATGATGCTGAAACGTCTGTTTTAGCCTCTATAACAGCGATCCAAAATCCCACATGGCTATGCCTTGTTTATAGTTGATGCTATTATTGTGATGTTTGTTTGTATTTTCAACATATGTGAAGTGTGCTAATACGCCACAGGGTGCCAGCAGCCTGGAGAGGTGGATTTGGCCGACTCCAGGACTTCTTTCCAATCCGCAAACAGTAACTTTTTCCCTTGCGAAATTAGAGGATAGAACACTGTTCATTTTTACCTGCGTTGCTAACTAACTCAAAACTTTTAAACC

mRNA sequence

GGCGGGAGGGATGGTGAAGTGGTGGGATATCTAGGTTTTACCGAAGCAAAATTTCATTTCTCAAACTGCTCTTCAAACTGCTCTCGATCACTCACTTCGATTCTCTTGTAGGGTTTCATTATTCTTCACTCCTACCTTTACAGGGGAAGAACGATGTATGCAAGTCAATTCGACGGCAACGCTGCCTTCTCCGGTGGTGGATTTATGCCATCTCAGACCACCCAGGCCCCTGATCACTCATTCTCTCCGGCCAAAAATCGGGATGTCCAGGCATTGCTTCCATTAACAGTGAAACAGATAAACGACGCATTTCTGTCCAGTGACGATAAATCAAATTTTGTTATTGATGGTGTTGATGTTAACAATGTTAAGCTTGTAGGGATGGTGCGTAATAGAGCAGGAAGAATTACTGATGTGACTTTTGCACTGGACGATGGCACTGGACGGATTGACTGTAGCAAATGGGTCAATGAAGCTGCGGATTCAAATGAAGTTGAGGGAATATTGGATGGCATGTATGTCCGGGTCCATGGCCACTTAAAGAGCTTCCAGGGTAAAAGAACTTTAAATGTCTTTTCTATCAGGCCGGTGACGGACTATAATGAGATCACAAATCACTTCATCGAATCCATATATGTTCATTTTTACAACACCAGATTGCGGAAACAACAAAGTAGTAGTATGACTACTCAGCCACAGATGACAAATCTATCTAATACGCCCGTGAAAGGATATCAAGCTCCCATTGCAAATCAATACACTGGTCAAGCAGGCGGTGATAGTTGGAAGAGCCTTGAGCAGATGGTCTTAGATTTTCTGCAACTTCCTTCATGCGATTCTGAAAGAGGCGCACACCGTGATGTCATTGCTCAACAGCTCAAAGTTCCACTAGAGAAGCTCATTCCGGCGATGAAAAATCTAGAAGAGGAAGGCCTAATCTACTCAACAACCGATGATTACCACTTCAAATCAACCGCCAACGGTTGACGTTTCTATTATGGGTGCCAGCAGCCTGGAGAGGTGGATTTGGCCGACTCCAGGACTTCTTTCCAATCCGCAAACAGTAACTTTTTCCCTTGCGAAATTAGAGGATAGAACACTGTTCATTTTTACCTGCGTTGCTAACTAACTCAAAACTTTTAAACC

Coding sequence (CDS)

ATGTATGCAAGTCAATTCGACGGCAACGCTGCCTTCTCCGGTGGTGGATTTATGCCATCTCAGACCACCCAGGCCCCTGATCACTCATTCTCTCCGGCCAAAAATCGGGATGTCCAGGCATTGCTTCCATTAACAGTGAAACAGATAAACGACGCATTTCTGTCCAGTGACGATAAATCAAATTTTGTTATTGATGGTGTTGATGTTAACAATGTTAAGCTTGTAGGGATGGTGCGTAATAGAGCAGGAAGAATTACTGATGTGACTTTTGCACTGGACGATGGCACTGGACGGATTGACTGTAGCAAATGGGTCAATGAAGCTGCGGATTCAAATGAAGTTGAGGGAATATTGGATGGCATGTATGTCCGGGTCCATGGCCACTTAAAGAGCTTCCAGGGTAAAAGAACTTTAAATGTCTTTTCTATCAGGCCGGTGACGGACTATAATGAGATCACAAATCACTTCATCGAATCCATATATGTTCATTTTTACAACACCAGATTGCGGAAACAACAAAGTAGTAGTATGACTACTCAGCCACAGATGACAAATCTATCTAATACGCCCGTGAAAGGATATCAAGCTCCCATTGCAAATCAATACACTGGTCAAGCAGGCGGTGATAGTTGGAAGAGCCTTGAGCAGATGGTCTTAGATTTTCTGCAACTTCCTTCATGCGATTCTGAAAGAGGCGCACACCGTGATGTCATTGCTCAACAGCTCAAAGTTCCACTAGAGAAGCTCATTCCGGCGATGAAAAATCTAGAAGAGGAAGGCCTAATCTACTCAACAACCGATGATTACCACTTCAAATCAACCGCCAACGGTTGA

Protein sequence

MYASQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRIDCSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQMTNLSNTPVKGYQAPIANQYTGQAGGDSWKSLEQMVLDFLQLPSCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDYHFKSTANG*

Homology

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BLAST of MELO3C017458 vs. Swiss-Prot
Match: RFA2B_ARATH (Replication protein A 32 kDa subunit B OS=Arabidopsis thaliana GN=RPA2B PE=2 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 1.4e-70
Identity = 141/280 (50.36%), Postives = 185/280 (66.07%), Query Frame = 1


Query: 1   MYASQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKS 60
           MY   FDGNAAF+GGGFMPSQ T     S S  KNRDV+ LLPLT+KQ++ A  S+  +S
Sbjct: 1   MYGGDFDGNAAFAGGGFMPSQATTQAHESSSSLKNRDVRTLLPLTLKQLSSA--STTGES 60

Query: 61  NFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRIDCSKWVNEAADSNEVEGILDG 120
           NF IDGVD+  V +VG +     RIT V F +DDGTG +DC +W +   ++ E+E +  G
Sbjct: 61  NFSIDGVDIKTVVIVGRISRMENRITQVDFVVDDGTGWVDCVRWCHARQETEEMEAVKLG 120

Query: 121 MYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLR--KQQSSSMT 180
           MYVR+HGHLK FQGKR++NVFS+RPVTD+NEI +HF E +YVH YNT+LR       + T
Sbjct: 121 MYVRLHGHLKIFQGKRSVNVFSVRPVTDFNEIVHHFTECMYVHMYNTKLRGGSITQDTAT 180

Query: 181 TQPQMT-NLSNTPVKGYQAPIANQYTGQAGGDSWKSLEQMVLDFLQLP-SCDSERGAHRD 240
            +PQM  +   TP K YQ   +NQ+  Q   DS   ++Q VL++L  P    SE G H D
Sbjct: 181 PRPQMPYSTMPTPAKPYQTGPSNQFPNQF-NDSMHGVKQTVLNYLNQPMHIVSEAGVHCD 240

Query: 241 VIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDYHFKSTAN 277
           +IA++L++PL ++  A++ L  +G IYST D+  FKSTAN
Sbjct: 241 IIARELRIPLLQVKEALEQLSNDGCIYSTLDETCFKSTAN 277

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BLAST of MELO3C017458 vs. Swiss-Prot
Match: RFA2A_ARATH (Replication protein A 32 kDa subunit A OS=Arabidopsis thaliana GN=RPA2A PE=1 SV=2)

HSP 1 Score: 258.5 bits (659), Expect = 8.6e-68
Identity = 133/274 (48.54%), Postives = 186/274 (67.88%), Query Frame = 1


Query: 3   ASQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNF 62
           +SQF+ N+ FSGGGFM SQ +QA + S S AKNRD Q L+P+TVKQI + F SS +KS  
Sbjct: 4   SSQFEPNSGFSGGGFMSSQPSQAYESSSSTAKNRDFQGLVPVTVKQITECFQSSGEKSGL 63

Query: 63  VIDGVDVNNVKLVGMVRNR-AGRITDVTFALDDGTGRIDCSKWVNEAADSNEVEGILDGM 122
           VI+G+ + NV LVG+V ++   ++T+V F LDDGTGRIDC +WV+E  D+ E+E + DG 
Sbjct: 64  VINGISLTNVSLVGLVCDKDESKVTEVRFTLDDGTGRIDCKRWVSETFDAREMESVRDGT 123

Query: 123 YVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQP 182
           YVR+ GHLK+FQGK  L VFS+RP+ D+NE+T H+IE I+ +  N+  ++QQ   +T   
Sbjct: 124 YVRLSGHLKTFQGKTQLLVFSVRPIMDFNEVTFHYIECIHFYSQNSESQRQQVGDVTQSV 183

Query: 183 QMT--NLSNTPVKGYQAPIANQYTGQAGGDSWKSLEQMVLDFLQLPSCDS-ERGAHRDVI 242
             T    SNT       P+ +       G+  K+L+ M+LD+L+ P+C + ++G H D I
Sbjct: 184 NTTFQGGSNTNQATLLNPVVSSQNND--GNGRKNLDDMILDYLKQPACTARQQGIHIDEI 243

Query: 243 AQQLKVPLEKLIPAMKNLEEEGLIYSTTDDYHFK 273
           AQQLK+P  KL   +++LE +GLIYST D+YHFK
Sbjct: 244 AQQLKIPKNKLEGVVQSLEGDGLIYSTIDEYHFK 275

[Close]

BLAST of MELO3C017458 vs. Swiss-Prot
Match: RFA2B_ORYSJ (Replication protein A 32 kDa subunit B OS=Oryza sativa subsp. japonica GN=RPA2B PE=1 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 4.3e-51
Identity = 107/280 (38.21%), Postives = 174/280 (62.14%), Query Frame = 1


Query: 8   GNAA--FSGGGFMPSQTTQAPDHSFSPA----KNRDVQALLPLTVKQINDAFLSSDDKSN 67
           GNA+  F GGGFMPSQ T A + +        K+R+ QALLPLTVKQI DA  ++DDKSN
Sbjct: 19  GNASSLFGGGGFMPSQATNAAEGTSGGGGGFPKSRNAQALLPLTVKQIMDASQTNDDKSN 78

Query: 68  FVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRIDCSKWVNEAADSNEVEGILDGM 127
           F ++G++V+ V+LVG + N+  R+TDV+F LDDGTGR+  ++W N++ D+ E+  I +G 
Sbjct: 79  FAVNGMEVSTVRLVGRMLNKLDRVTDVSFTLDDGTGRVPVNRWENDSTDTKEMADIQNGD 138

Query: 128 YVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQP 187
           YV V+G LK FQGKR +  +S+R +T++N++T+HF+  ++VH   TR + Q +++  T  
Sbjct: 139 YVIVNGGLKGFQGKRQVVAYSVRRITNFNDVTHHFLHCVHVHLELTRPKSQVNANTATGT 198

Query: 188 QMTNLSNTPVKGYQAPIANQ---YTGQAGGDSWKSLEQMVLDFLQLPS-CDSERGAHRDV 247
               +    +   Q+P+ NQ   ++      +  ++  +VL+    P+  + + G   D 
Sbjct: 199 PNQTMPRDSMAYNQSPLTNQASTFSAPQNTGTGTNMIDLVLNVFHDPAVMNDDHGVGVDY 258

Query: 248 IAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDYHFKSTANG 278
           ++++L +P E +   + +  + G +Y+T DD+H+KST NG
Sbjct: 259 VSRRLNLPEETVGKIIIDQVDLGHLYATIDDHHYKSTMNG 298

[Close]

BLAST of MELO3C017458 vs. Swiss-Prot
Match: RFA2A_ORYSJ (Replication protein A 32 kDa subunit A OS=Oryza sativa subsp. japonica GN=RPA2A PE=1 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 3.0e-44
Identity = 111/279 (39.78%), Postives = 159/279 (56.99%), Query Frame = 1


Query: 11  AFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAF---LSSDDKSNFVIDGV 70
           AFS   F  SQ   A   S +P+K+R   + +PLTVKQI++A    ++ +  + FV+DGV
Sbjct: 9   AFSPSQFTSSQNAAAD--STTPSKSRGASSTMPLTVKQISEAQQSGITGEKGAPFVVDGV 68

Query: 71  DVNNVKLVGMVRNRAGRITDVTFALDDGTGRIDCSKWVNEAADSNEVEGILDGMYVRVHG 130
           +  NV+LVG+V  +  R TDV+F +DDGTGR+D  +WVN+ ADS E   + +GMYV V G
Sbjct: 69  ETANVRLVGLVSGKTERNTDVSFTIDDGTGRLDFIRWVNDGADSAETAAVQNGMYVSVIG 128

Query: 131 HLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLR---------KQQSSSMT 190
            LK  Q ++    F+IRPVTDYNE+T HFI+ + +H  NT+ +            SSS  
Sbjct: 129 SLKGLQERKRATAFAIRPVTDYNEVTLHFIQCVRMHLENTKSQIGSPAKTYSAMGSSSSN 188

Query: 191 TQPQMTNLSNTPVKGYQAPIANQYTGQAGGDSWKSLEQMVLDFLQLP-SCDSERGAHRDV 250
              +MT  + T VK   AP+ +   G     S   L   VL+  + P + +SE G H D 
Sbjct: 189 GFSEMT--TPTSVKSNPAPVLSVTNG-----SKTDLNTEVLNVFREPANVESEHGVHIDE 248

Query: 251 IAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDYHFKSTAN 277
           I ++ ++P  K+  A+  L + G IYST D+ H+KS  N
Sbjct: 249 IVKRFRLPEAKIKVAIDYLADIGHIYSTIDESHYKSAFN 278

[Close]

BLAST of MELO3C017458 vs. Swiss-Prot
Match: RFA2C_ORYSJ (Replication protein A 32 kDa subunit C OS=Oryza sativa subsp. japonica GN=RPA2C PE=1 SV=2)

HSP 1 Score: 112.8 bits (281), Expect = 5.9e-24
Identity = 72/210 (34.29%), Postives = 111/210 (52.86%), Query Frame = 1


Query: 12  FSGGGFMPSQTTQAPDHSFS-----------PAKNRDVQ--ALLPLTVKQINDAF---LS 71
           FSG   MPSQ + AP   +S           P+K RD +    +P TV  I+ +F   L+
Sbjct: 8   FSGTALMPSQRSGAPAPEYSAAGTGAAAAPSPSKPRDPRFSGCVPATVLHISRSFAAALA 67

Query: 72  SDDKSN--FVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRIDCSKWVNEAADSNE 131
           +D   +  F IDGV+  NV+++G V +   R TDV F LDD TG+I   +W+ + +D+ +
Sbjct: 68  ADGGGDPVFSIDGVETTNVRVLGRVVSVVSRDTDVCFTLDDSTGKIPLVRWITDQSDTRD 127

Query: 132 VEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHF--YNTRLRK 191
              I +G+YV+V  +L  FQ K+     SIRP+ ++NE+  HFIE ++VH     +++++
Sbjct: 128 TSYIQEGVYVKVQVNLMGFQAKKQGLARSIRPINNFNEVVLHFIECMHVHLESVQSKMQR 187

Query: 192 QQSSSMTTQPQMTNLSNTPVKGYQAPIANQ 202
           Q   S+ T       S+  V+ YQ     Q
Sbjct: 188 QLPPSVQTNEYTHVPSSGGVRDYQVHFTPQ 217

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BLAST of MELO3C017458 vs. TrEMBL
Match: A0A0A0LU56_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G423180 PE=4 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 3.2e-109
Identity = 199/201 (99.00%), Postives = 200/201 (99.50%), Query Frame = 1


Query: 1   MYASQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKS 60
           MYASQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKS
Sbjct: 1   MYASQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKS 60

Query: 61  NFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRIDCSKWVNEAADSNEVEGILDG 120
           NFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRIDCSKWVNEAADSNEVEGILDG
Sbjct: 61  NFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRIDCSKWVNEAADSNEVEGILDG 120

Query: 121 MYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQ 180
           MYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQ
Sbjct: 121 MYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQ 180

Query: 181 PQMTNLSNTPVKGYQAPIANQ 202
           PQMTNLSNTP+K YQAPIANQ
Sbjct: 181 PQMTNLSNTPMKVYQAPIANQ 201

[Close]

BLAST of MELO3C017458 vs. TrEMBL
Match: D7SQB0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0052g00850 PE=4 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 2.3e-99
Identity = 188/280 (67.14%), Postives = 228/280 (81.43%), Query Frame = 1


Query: 1   MYA-SQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDK 60
           MY+ SQFDGNAAFSGGGFMPSQ TQA +  FSPA+NRD QALLPLTVKQI++AFLSSDDK
Sbjct: 1   MYSHSQFDGNAAFSGGGFMPSQATQAAEPGFSPARNRDTQALLPLTVKQISEAFLSSDDK 60

Query: 61  SNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRIDCSKWVNEAADSNEVEGILD 120
           SNF+IDGV+VNNV LVGMV N+A R+TDV F LDDGTGRIDC++WVNEA D+ E+EGILD
Sbjct: 61  SNFLIDGVEVNNVTLVGMVFNKAERVTDVGFMLDDGTGRIDCNRWVNEAVDTKEMEGILD 120

Query: 121 GMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTT 180
           GMYVRVHGHLK FQGKR LNVFSIRPVTD+NEI +HFIE IYVH YNT+ R Q      T
Sbjct: 121 GMYVRVHGHLKGFQGKRHLNVFSIRPVTDFNEIASHFIECIYVHIYNTKSRVQAGG--PT 180

Query: 181 QPQMTNLS-NTPVKGYQAPIANQYTGQAGGDSWKSLEQMVLDFLQLP-SCDSERGAHRDV 240
           Q  +TN +  TP+KGYQA   NQ++GQ G    K ++Q+V+D+LQ P S   ++G  RD 
Sbjct: 181 QSHVTNPAIGTPLKGYQASQPNQFSGQYGA-GLKGVDQLVIDYLQQPQSLARDQGVGRDE 240

Query: 241 IAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDYHFKSTANG 278
           +AQQL VP++K++ ++++LEEEGLIYST D++H+KST NG
Sbjct: 241 LAQQLNVPVDKIMESIRSLEEEGLIYSTIDEWHYKSTGNG 277

[Close]

BLAST of MELO3C017458 vs. TrEMBL
Match: A0A022PTG0_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a011521mg PE=4 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 9.9e-95
Identity = 171/275 (62.18%), Postives = 212/275 (77.09%), Query Frame = 1


Query: 4   SQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFV 63
           SQFDGNAAFSGGGFMPSQ TQ  D +FSPAK+R+ QALLPLTVKQI++AF +SDDK+NF+
Sbjct: 5   SQFDGNAAFSGGGFMPSQATQNADPAFSPAKSREAQALLPLTVKQISEAFQASDDKANFL 64

Query: 64  IDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRIDCSKWVNEAADSNEVEGILDGMYV 123
           IDGVDVNNVKL+GM+  +  R+TDV+F LDDGTGRIDC +WVNEA D+ E+E +L+GMYV
Sbjct: 65  IDGVDVNNVKLLGMLYEKTERVTDVSFVLDDGTGRIDCHRWVNEAVDTKEMELLLNGMYV 124

Query: 124 RVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQM 183
           +VHGHLK FQGK+ L V+S+RPVTDY+E+ NHF + IYVH YNTRLRK Q +        
Sbjct: 125 KVHGHLKGFQGKKQLMVYSVRPVTDYDEVANHFADCIYVHCYNTRLRKSQDAHQVPGHMQ 184

Query: 184 TNLSNTPVKGYQAPIANQYTGQAGGDSWKSLEQMVLDFLQLPSC-DSERGAHRDVIAQQL 243
            +  NTP KGYQ+  +N  + Q   D  K +E+ +LDFLQ PSC   E+G HRD   Q L
Sbjct: 185 NSTFNTPSKGYQSTPSNNVSVQYNTDEVKGIERKILDFLQQPSCIAKEKGVHRDEFVQYL 244

Query: 244 KVPLEKLIPAMKNLEEEGLIYSTTDDYHFKSTANG 278
            VP  K++ A+++LE EGLIYST D++HFKSTANG
Sbjct: 245 NVPENKILEAIESLESEGLIYSTIDEFHFKSTANG 279

[Close]

BLAST of MELO3C017458 vs. TrEMBL
Match: Q4LAW1_CAPCH (Putative replication factor A (Fragment) OS=Capsicum chinense GN=rfa PE=2 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 1.4e-93
Identity = 173/275 (62.91%), Postives = 217/275 (78.91%), Query Frame = 1


Query: 4   SQFDGNAAFSGGGFMPSQTTQ-APDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNF 63
           +QFDGNAAFSGGGFMPSQ TQ A DHSFSP KNRD Q L+PLTVKQI++AF SSDDK+NF
Sbjct: 25  NQFDGNAAFSGGGFMPSQATQTASDHSFSPTKNRDSQTLIPLTVKQISEAFQSSDDKTNF 84

Query: 64  VIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRIDCSKWVNEAADSNEVEGILDGMY 123
           +IDGVDVNNVKLVG++ N+A  +T V+F +DDGTGR+DC +WVNEA D+ E+E + +G+Y
Sbjct: 85  LIDGVDVNNVKLVGILFNKAEMLTAVSFVVDDGTGRLDCFRWVNEAVDTKEMEALTNGIY 144

Query: 124 VRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQ 183
           VRVHGHLK FQGK+ L  +S+RPV DYNEI +HF E IYVH YN+RLRKQQ SS  +   
Sbjct: 145 VRVHGHLKGFQGKKQLMAYSVRPVDDYNEIASHFAEVIYVHSYNSRLRKQQDSSFMSAQV 204

Query: 184 MTNLSNTPVKGYQAPIANQYTGQAGGDSWKSLEQMVLDFLQLPSCDS-ERGAHRDVIAQQ 243
            ++  NTP+KGYQA  +NQ+ G    D    + +MVLD+LQ PSC + E+G HR+ +AQQ
Sbjct: 205 PSSSFNTPLKGYQASASNQFPG-FNMDGIGGVHKMVLDYLQQPSCLALEKGVHRNELAQQ 264

Query: 244 LKVPLEKLIPAMKNLEEEGLIYSTTDDYHFKSTAN 277
           L+VP EK++ AM+ LE EGL+YST DD+H+KST N
Sbjct: 265 LRVPSEKIMGAMEALESEGLVYSTIDDFHYKSTGN 298

[Close]

BLAST of MELO3C017458 vs. TrEMBL
Match: M1CQ28_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400028143 PE=4 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 9.2e-93
Identity = 170/276 (61.59%), Postives = 216/276 (78.26%), Query Frame = 1


Query: 4   SQFDGNAAFSGGGFMPSQTTQ-APDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNF 63
           +QFDGNAAFSGGGFMPSQ TQ A DHSFSPAKNRD Q L+PLTVKQI++AF SSDDK+NF
Sbjct: 6   NQFDGNAAFSGGGFMPSQATQTAGDHSFSPAKNRDSQTLIPLTVKQISEAFQSSDDKTNF 65

Query: 64  VIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRIDCSKWVNEAADSNEVEGILDGMY 123
           +IDGVDVNNVKLVG++ N+  R+TDV+F +DDGTGR+DC +WVNEA D+ E+E + +GMY
Sbjct: 66  LIDGVDVNNVKLVGILCNKMERVTDVSFVVDDGTGRLDCFRWVNEAVDTKEMEAVTNGMY 125

Query: 124 VRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQ 183
           VRVHGHLK F GK+ L  +S+RPV DYNEI  HF + IYVH YN+ LRKQ  SS      
Sbjct: 126 VRVHGHLKGFHGKKQLMAYSVRPVDDYNEIAYHFAQVIYVHSYNSSLRKQHDSSSMPAQV 185

Query: 184 MTNLSNTPVKGYQAPIANQYTGQAGGDSWKSLEQMVLDFLQLPSCDS-ERGAHRDVIAQQ 243
            ++  NTP+KGYQA  +NQ+ G +  D  + +++MVLDFLQ PSC + E+G HR+ + QQ
Sbjct: 186 PSSAFNTPLKGYQASASNQFPGYS-MDGIRGVDKMVLDFLQQPSCLALEKGVHRNELVQQ 245

Query: 244 LKVPLEKLIPAMKNLEEEGLIYSTTDDYHFKSTANG 278
           L++P EK+  A+ +LE EGLIY+T D++H+KST NG
Sbjct: 246 LQLPSEKISEALDSLESEGLIYTTIDEFHYKSTGNG 280

[Close]

BLAST of MELO3C017458 vs. TAIR10
Match: AT2G24490.1 (AT2G24490.1 replicon protein A2)

HSP 1 Score: 258.5 bits (659), Expect = 4.9e-69
Identity = 133/274 (48.54%), Postives = 186/274 (67.88%), Query Frame = 1


Query: 3   ASQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNF 62
           +SQF+ N+ FSGGGFM SQ +QA + S S AKNRD Q L+P+TVKQI + F SS +KS  
Sbjct: 4   SSQFEPNSGFSGGGFMSSQPSQAYESSSSTAKNRDFQGLVPVTVKQITECFQSSGEKSGL 63

Query: 63  VIDGVDVNNVKLVGMVRNR-AGRITDVTFALDDGTGRIDCSKWVNEAADSNEVEGILDGM 122
           VI+G+ + NV LVG+V ++   ++T+V F LDDGTGRIDC +WV+E  D+ E+E + DG 
Sbjct: 64  VINGISLTNVSLVGLVCDKDESKVTEVRFTLDDGTGRIDCKRWVSETFDAREMESVRDGT 123

Query: 123 YVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQP 182
           YVR+ GHLK+FQGK  L VFS+RP+ D+NE+T H+IE I+ +  N+  ++QQ   +T   
Sbjct: 124 YVRLSGHLKTFQGKTQLLVFSVRPIMDFNEVTFHYIECIHFYSQNSESQRQQVGDVTQSV 183

Query: 183 QMT--NLSNTPVKGYQAPIANQYTGQAGGDSWKSLEQMVLDFLQLPSCDS-ERGAHRDVI 242
             T    SNT       P+ +       G+  K+L+ M+LD+L+ P+C + ++G H D I
Sbjct: 184 NTTFQGGSNTNQATLLNPVVSSQNND--GNGRKNLDDMILDYLKQPACTARQQGIHIDEI 243

Query: 243 AQQLKVPLEKLIPAMKNLEEEGLIYSTTDDYHFK 273
           AQQLK+P  KL   +++LE +GLIYST D+YHFK
Sbjct: 244 AQQLKIPKNKLEGVVQSLEGDGLIYSTIDEYHFK 275

[Close]

BLAST of MELO3C017458 vs. TAIR10
Match: AT3G02920.2 (AT3G02920.2 Replication protein A, subunit RPA32)

HSP 1 Score: 256.9 bits (655), Expect = 1.4e-68
Identity = 143/300 (47.67%), Postives = 189/300 (63.00%), Query Frame = 1


Query: 1   MYASQFDGNAAFSGGGFMPSQ-TTQAPDHSFS-------------------PAKNRDVQA 60
           MY   FDGNAAF+GGGFMPSQ TTQA + S S                     +NRDV+ 
Sbjct: 1   MYGGDFDGNAAFAGGGFMPSQATTQAHESSSSLKVYVSDSRRFSGISAAKSSIRNRDVRT 60

Query: 61  LLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID 120
           LLPLT+KQ++ A  S+  +SNF IDGVD+  V +VG +     RIT V F +DDGTG +D
Sbjct: 61  LLPLTLKQLSSA--STTGESNFSIDGVDIKTVVIVGRISRMENRITQVDFVVDDGTGWVD 120

Query: 121 CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESI 180
           C +W +   ++ E+E +  GMYVR+HGHLK FQGKR++NVFS+RPVTD+NEI +HF E +
Sbjct: 121 CVRWCHARQETEEMEAVKLGMYVRLHGHLKIFQGKRSVNVFSVRPVTDFNEIVHHFTECM 180

Query: 181 YVHFYNTRLR--KQQSSSMTTQPQMT-NLSNTPVKGYQAPIANQYTGQAGGDSWKSLEQM 240
           YVH YNT+LR       + T +PQM  +   TP K YQ   +NQ+  Q   DS   ++Q 
Sbjct: 181 YVHMYNTKLRGGSITQDTATPRPQMPYSTMPTPAKPYQTGPSNQFPNQF-NDSMHGVKQT 240

Query: 241 VLDFLQLP-SCDSERGAHRDVIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDYHFKSTAN 277
           VL++L  P    SE G H D+IA++L++PL ++  A++ L  +G IYST D+  FKSTAN
Sbjct: 241 VLNYLNQPMHIVSEAGVHCDIIARELRIPLLQVKEALEQLSNDGCIYSTLDETCFKSTAN 297

[Close]

BLAST of MELO3C017458 vs. NCBI nr
Match: gi|659107295|ref|XP_008453602.1| (PREDICTED: replication protein A 32 kDa subunit B-like [Cucumis melo])

HSP 1 Score: 560.8 bits (1444), Expect = 1.3e-156
Identity = 277/277 (100.00%), Postives = 277/277 (100.00%), Query Frame = 1


Query: 1   MYASQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKS 60
           MYASQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKS
Sbjct: 1   MYASQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKS 60

Query: 61  NFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRIDCSKWVNEAADSNEVEGILDG 120
           NFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRIDCSKWVNEAADSNEVEGILDG
Sbjct: 61  NFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRIDCSKWVNEAADSNEVEGILDG 120

Query: 121 MYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQ 180
           MYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQ
Sbjct: 121 MYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQ 180

Query: 181 PQMTNLSNTPVKGYQAPIANQYTGQAGGDSWKSLEQMVLDFLQLPSCDSERGAHRDVIAQ 240
           PQMTNLSNTPVKGYQAPIANQYTGQAGGDSWKSLEQMVLDFLQLPSCDSERGAHRDVIAQ
Sbjct: 181 PQMTNLSNTPVKGYQAPIANQYTGQAGGDSWKSLEQMVLDFLQLPSCDSERGAHRDVIAQ 240

Query: 241 QLKVPLEKLIPAMKNLEEEGLIYSTTDDYHFKSTANG 278
           QLKVPLEKLIPAMKNLEEEGLIYSTTDDYHFKSTANG
Sbjct: 241 QLKVPLEKLIPAMKNLEEEGLIYSTTDDYHFKSTANG 277

[Close]

BLAST of MELO3C017458 vs. NCBI nr
Match: gi|449457165|ref|XP_004146319.1| (PREDICTED: replication protein A 32 kDa subunit B-like [Cucumis sativus])

HSP 1 Score: 554.7 bits (1428), Expect = 9.3e-155
Identity = 274/277 (98.92%), Postives = 276/277 (99.64%), Query Frame = 1


Query: 1   MYASQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKS 60
           MYASQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKS
Sbjct: 1   MYASQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKS 60

Query: 61  NFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRIDCSKWVNEAADSNEVEGILDG 120
           NFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRIDCSKWVNEAADSNEVEGILDG
Sbjct: 61  NFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRIDCSKWVNEAADSNEVEGILDG 120

Query: 121 MYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQ 180
           MYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQ
Sbjct: 121 MYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQ 180

Query: 181 PQMTNLSNTPVKGYQAPIANQYTGQAGGDSWKSLEQMVLDFLQLPSCDSERGAHRDVIAQ 240
           PQMTNLSNTP+K YQAPIANQYTGQAGGDSWKSLEQMVLDFLQLPSCDSERGAHRDVIAQ
Sbjct: 181 PQMTNLSNTPMKVYQAPIANQYTGQAGGDSWKSLEQMVLDFLQLPSCDSERGAHRDVIAQ 240

Query: 241 QLKVPLEKLIPAMKNLEEEGLIYSTTDDYHFKSTANG 278
           QLKVPLEKLIPAMKNLEEEGLIYSTTDD+HFKSTANG
Sbjct: 241 QLKVPLEKLIPAMKNLEEEGLIYSTTDDFHFKSTANG 277

[Close]

BLAST of MELO3C017458 vs. NCBI nr
Match: gi|700210364|gb|KGN65460.1| (hypothetical protein Csa_1G423180 [Cucumis sativus])

HSP 1 Score: 402.9 bits (1034), Expect = 4.5e-109
Identity = 199/201 (99.00%), Postives = 200/201 (99.50%), Query Frame = 1


Query: 1   MYASQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKS 60
           MYASQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKS
Sbjct: 1   MYASQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKS 60

Query: 61  NFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRIDCSKWVNEAADSNEVEGILDG 120
           NFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRIDCSKWVNEAADSNEVEGILDG
Sbjct: 61  NFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRIDCSKWVNEAADSNEVEGILDG 120

Query: 121 MYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQ 180
           MYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQ
Sbjct: 121 MYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQ 180

Query: 181 PQMTNLSNTPVKGYQAPIANQ 202
           PQMTNLSNTP+K YQAPIANQ
Sbjct: 181 PQMTNLSNTPMKVYQAPIANQ 201

[Close]

BLAST of MELO3C017458 vs. NCBI nr
Match: gi|1009105368|ref|XP_015875792.1| (PREDICTED: replication protein A 32 kDa subunit A-like isoform X1 [Ziziphus jujuba])

HSP 1 Score: 370.5 bits (950), Expect = 2.5e-99
Identity = 187/278 (67.27%), Postives = 223/278 (80.22%), Query Frame = 1


Query: 1   MYASQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKS 60
           MY SQFDG+AAFSGGGFMPSQ TQ PD +FSP+KNRD+QALLPLTVKQI+DA++S ++KS
Sbjct: 1   MYGSQFDGSAAFSGGGFMPSQATQTPDPAFSPSKNRDIQALLPLTVKQISDAYVSGNEKS 60

Query: 61  NFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRIDCSKWVNEAADSNEVEGILDG 120
            FVIDGVDV+NVKLVGMVR++AGRITD TF LDDGTGRIDC+KW +E  D+NE+EGILDG
Sbjct: 61  EFVIDGVDVSNVKLVGMVRDKAGRITDFTFVLDDGTGRIDCNKWSHEPIDTNEMEGILDG 120

Query: 121 MYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQ 180
           MYV VHG LKSFQ K +LNVFSIRPV DYNEI +HFIE IYVHFYN+RLRK Q  +++TQ
Sbjct: 121 MYVCVHGRLKSFQNKTSLNVFSIRPVDDYNEIASHFIECIYVHFYNSRLRKPQ-GAVSTQ 180

Query: 181 PQMTNLSNTPVKGYQAPIANQYTGQAGGDSWKSLEQMVLDFLQLPSC-DSERGAHRDVIA 240
           P  T+          AP  N  +GQ   D  KS E+M+LDFL LPSC   E GAHRDVI+
Sbjct: 181 PPATS----------AP--NLTSGQYSSDGQKSTEEMILDFLHLPSCLAREEGAHRDVIS 240

Query: 241 QQLKVPLEKLIPAMKNLEEEGLIYSTTDDYHFKSTANG 278
           QQLK+P++KL+ A+ NL  EG++YST DD+H+KS  NG
Sbjct: 241 QQLKIPVDKLMLAIGNLVREGVVYSTVDDFHYKSAING 265

[Close]

BLAST of MELO3C017458 vs. NCBI nr
Match: gi|731408404|ref|XP_010656840.1| (PREDICTED: replication protein A 32 kDa subunit A isoform X1 [Vitis vinifera])

HSP 1 Score: 370.2 bits (949), Expect = 3.3e-99
Identity = 188/280 (67.14%), Postives = 228/280 (81.43%), Query Frame = 1


Query: 1   MYA-SQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDK 60
           MY+ SQFDGNAAFSGGGFMPSQ TQA +  FSPA+NRD QALLPLTVKQI++AFLSSDDK
Sbjct: 1   MYSHSQFDGNAAFSGGGFMPSQATQAAEPGFSPARNRDTQALLPLTVKQISEAFLSSDDK 60

Query: 61  SNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRIDCSKWVNEAADSNEVEGILD 120
           SNF+IDGV+VNNV LVGMV N+A R+TDV F LDDGTGRIDC++WVNEA D+ E+EGILD
Sbjct: 61  SNFLIDGVEVNNVTLVGMVFNKAERVTDVGFMLDDGTGRIDCNRWVNEAVDTKEMEGILD 120

Query: 121 GMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTT 180
           GMYVRVHGHLK FQGKR LNVFSIRPVTD+NEI +HFIE IYVH YNT+ R Q      T
Sbjct: 121 GMYVRVHGHLKGFQGKRHLNVFSIRPVTDFNEIASHFIECIYVHIYNTKSRVQAGG--PT 180

Query: 181 QPQMTNLS-NTPVKGYQAPIANQYTGQAGGDSWKSLEQMVLDFLQLP-SCDSERGAHRDV 240
           Q  +TN +  TP+KGYQA   NQ++GQ G    K ++Q+V+D+LQ P S   ++G  RD 
Sbjct: 181 QSHVTNPAIGTPLKGYQASQPNQFSGQYGA-GLKGVDQLVIDYLQQPQSLARDQGVGRDE 240

Query: 241 IAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDYHFKSTANG 278
           +AQQL VP++K++ ++++LEEEGLIYST D++H+KST NG
Sbjct: 241 LAQQLNVPVDKIMESIRSLEEEGLIYSTIDEWHYKSTGNG 277

The following BLAST results are available for this feature:

BLAST of MELO3C017458 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RFA2B_ARATH	1.4e-70	50.36	Replication protein A 32 kDa subunit B OS=Arabidopsis thaliana GN=RPA2B PE=2 SV=...	[more]
RFA2A_ARATH	8.6e-68	48.54	Replication protein A 32 kDa subunit A OS=Arabidopsis thaliana GN=RPA2A PE=1 SV=...	[more]
RFA2B_ORYSJ	4.3e-51	38.21	Replication protein A 32 kDa subunit B OS=Oryza sativa subsp. japonica GN=RPA2B ...	[more]
RFA2A_ORYSJ	3.0e-44	39.78	Replication protein A 32 kDa subunit A OS=Oryza sativa subsp. japonica GN=RPA2A ...	[more]
RFA2C_ORYSJ	5.9e-24	34.29	Replication protein A 32 kDa subunit C OS=Oryza sativa subsp. japonica GN=RPA2C ...	[more]

BLAST of MELO3C017458 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LU56_CUCSA	3.2e-109	99.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G423180 PE=4 SV=1	[more]
D7SQB0_VITVI	2.3e-99	67.14	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0052g00850 PE=4 SV=...	[more]
A0A022PTG0_ERYGU	9.9e-95	62.18	Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a011521mg PE=4 SV=1	[more]
Q4LAW1_CAPCH	1.4e-93	62.91	Putative replication factor A (Fragment) OS=Capsicum chinense GN=rfa PE=2 SV=1	[more]
M1CQ28_SOLTU	9.2e-93	61.59	Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400028143 PE=4 SV=1	[more]

BLAST of MELO3C017458 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G24490.1	4.9e-69	48.54	replicon protein A2	[more]
AT3G02920.2	1.4e-68	47.67	Replication protein A, subunit RPA32	[more]

BLAST of MELO3C017458 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659107295\|ref\|XP_008453602.1\|	1.3e-156	100.00	PREDICTED: replication protein A 32 kDa subunit B-like [Cucumis melo]	[more]
gi\|449457165\|ref\|XP_004146319.1\|	9.3e-155	98.92	PREDICTED: replication protein A 32 kDa subunit B-like [Cucumis sativus]	[more]
gi\|700210364\|gb\|KGN65460.1\|	4.5e-109	99.00	hypothetical protein Csa_1G423180 [Cucumis sativus]	[more]
gi\|1009105368\|ref\|XP_015875792.1\|	2.5e-99	67.27	PREDICTED: replication protein A 32 kDa subunit A-like isoform X1 [Ziziphus juju...	[more]
gi\|731408404\|ref\|XP_010656840.1\|	3.3e-99	67.14	PREDICTED: replication protein A 32 kDa subunit A isoform X1 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004365	NA-bd_OB_tRNA
IPR011991	Winged helix-turn-helix DNA-binding domain
IPR012340	NA-bd_OB-fold
IPR014646	Rfa2/RPA32
IPR014892	RPA_C
IPR004365	NA-bd_OB_tRNA
IPR011991	Winged helix-turn-helix DNA-binding domain
IPR012340	NA-bd_OB-fold
IPR014892	RPA_C

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0003677	DNA binding
GO:0003676	nucleic acid binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **Biological Process**
Term	Definition
GO:0006260	DNA replication
GO:0006281	DNA repair
GO:0006310	DNA recombination

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006259	DNA metabolic process
biological_process	GO:0006310	DNA recombination
biological_process	GO:0006281	DNA repair
biological_process	GO:0006260	DNA replication
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003676	nucleic acid binding

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU43315	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C017458T1	MELO3C017458T1	mRNA
MELO3C017458T2	MELO3C017458T2	mRNA
MELO3C017458T3	MELO3C017458T3	mRNA
MELO3C017458T4	MELO3C017458T4	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU43315	MU43315	transcribed_cluster

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C017458	Csa1G423180	Cucumber (Chinese Long) v2	cumeB042
MELO3C017458	Cla018833	Watermelon (97103) v1	mewmB289
MELO3C017458	ClCG06G013390	Watermelon (Charleston Gray)	mewcgB254
MELO3C017458	Cla97C06G122820	Watermelon (97103) v2	mewmbB261
MELO3C017458	Bhi02G000566	Wax gourd	mewgoB307
MELO3C017458	CSPI01G20320	Wild cucumber (PI 183967)	cpimeB043
MELO3C017458	Cucsa.092540	Cucumber (Gy14) v1	cgymeB106
MELO3C017458	CmaCh10G003930	Cucurbita maxima (Rimu)	cmameB067
MELO3C017458	CmaCh11G003890	Cucurbita maxima (Rimu)	cmameB120
MELO3C017458	CmoCh10G004230	Cucurbita moschata (Rifu)	cmomeB059
MELO3C017458	CmoCh11G003860	Cucurbita moschata (Rifu)	cmomeB109
MELO3C017458	Lsi06G011790	Bottle gourd (USVL1VR-Ls)	lsimeB397
MELO3C017458	Cp4.1LG04g13040	Cucurbita pepo (Zucchini)	cpemeB615
MELO3C017458	Cp4.1LG18g06170	Cucurbita pepo (Zucchini)	cpemeB330
MELO3C017458	CsGy1G020120	Cucumber (Gy14) v2	cgybmeB039
MELO3C017458	Carg15239	Silver-seed gourd	carmeB0785
MELO3C017458	CsaV3_1G031640	Cucumber (Chinese Long) v3	cucmeB043

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C017458	Cucumber (Chinese Long) v3	cucmeB114
MELO3C017458	Watermelon (97103) v2	mewmbB241
MELO3C017458	Wax gourd	mewgoB272
MELO3C017458	Melon (DHL92) v3.5.1	memeB110
MELO3C017458	Cucumber (Gy14) v1	cgymeB104
MELO3C017458	Cucurbita maxima (Rimu)	cmameB153
MELO3C017458	Cucurbita maxima (Rimu)	cmameB720
MELO3C017458	Cucurbita moschata (Rifu)	cmomeB142
MELO3C017458	Cucurbita moschata (Rifu)	cmomeB711
MELO3C017458	Wild cucumber (PI 183967)	cpimeB108
MELO3C017458	Cucumber (Chinese Long) v2	cumeB108
MELO3C017458	Watermelon (Charleston Gray)	mewcgB234
MELO3C017458	Watermelon (97103) v1	mewmB288
MELO3C017458	Cucurbita pepo (Zucchini)	cpemeB086
MELO3C017458	Cucurbita pepo (Zucchini)	cpemeB749
MELO3C017458	Bottle gourd (USVL1VR-Ls)	lsimeB100
MELO3C017458	Cucumber (Gy14) v2	cgybmeB093
MELO3C017458	Silver-seed gourd	carmeB0057
MELO3C017458	Silver-seed gourd	carmeB0599
MELO3C017458	Silver-seed gourd	carmeB0969