MELO3C017446 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C017446
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionCysteine/Histidine-rich C1 domain family protein
Locationchr2 : 22249317 .. 22249762 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTTCAATGACCTAGATGATGTTTCACTAGCTCCATTGATAAAGAAGGCTTCTGTTCCTGATGTTGTAACTGAAAAATCTACTGATCATGTTTTGTCAGTTCATTCTCAAGGAAGCTCGTCATCGGAAGGTGTGTTCATTCCTACTCCTGACCTTCATCATACTTCTGTCATAGAACCAGGTCCATCACCTCACTCTCATCGATTAGGTCCTTCATTCTTGACAAAACTACTACAACTGATCCGCATGTTGACCCTACACGTGCCCCTGTTGATGAATCTGTTTCAGCTGAAGGAAGAACTGATGTTTGCAATGACGAACCCCCTGCTGGTGATGACGATGTTGCTGAGCTGTCAATACTGATGACCATAATGGTGAGGTTTCTGTTGATGATAATGTTGATTAAGGTGCTTATAATGATTCTCAACCAGAGACTCAACTAG

mRNA sequence

ATGGATTTCAATGACCTAGATGATGTTTCACTAGCTCCATTGATAAAGAAGGCTTCTGTTCCTGATGTTGTAACTGAAAAATCTACTGATCATGTTTTGTCAGTTCATTCTCAAGGAAGCTCGTCATCGGAAGCTGAAGGAAGAACTGATGTTTGCAATGACGAACCCCCTGCTGGTGATGACGATGTTGCTGAGCTGTCAATACTGATGACCATAATGGTGAGGTTTCTGTTGATGATAATGTTGATTAAGGTGCTTATAATGATTCTCAACCAGAGACTCAACTAG

Coding sequence (CDS)

ATGGATTTCAATGACCTAGATGATGTTTCACTAGCTCCATTGATAAAGAAGGCTTCTGTTCCTGATGTTGTAACTGAAAAATCTACTGATCATGTTTTGTCAGTTCATTCTCAAGGAAGCTCGTCATCGGAAGCTGAAGGAAGAACTGATGTTTGCAATGACGAACCCCCTGCTGGTGATGACGATGTTGCTGAGCTGTCAATACTGATGACCATAATGGTGAGGTTTCTGTTGATGATAATGTTGATTAAGGTGCTTATAATGATTCTCAACCAGAGACTCAACTAG

Protein sequence

MDFNDLDDVSLAPLIKKASVPDVVTEKSTDHVLSVHSQGSSSSEAEGRTDVCNDEPPAGDDDVAELSILMTIMVRFLLMIMLIKVLIMILNQRLN*
Homology
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BLAST of MELO3C017446 vs. NCBI nr
Match: gi|659074587|ref|XP_008437685.1| (PREDICTED: uncharacterized protein LOC103483026 [Cucumis melo])

HSP 1 Score: 58.9 bits (141), Expect = 5.5e-06
Identity = 30/44 (68.18%), Postives = 35/44 (79.55%), Query Frame = 1 

Query: 1  MDFNDLDDVSLAPLIKKASVPDVVTEKSTDHVLSVHSQGSSSSE 45
          +D +DLDDV LA L+KK + PDVV EK TDHVLS +SQ SSSSE
Sbjct: 19 IDSDDLDDVPLARLVKKVTTPDVVPEKFTDHVLSDYSQESSSSE 62

The following BLAST results are available for this feature:
BLAST of MELO3C017446 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659074587|ref|XP_008437685.1|5.5e-0668.18PREDICTED: uncharacterized protein LOC103483026 [Cucumis melo][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C017446T1MELO3C017446T1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C017446Cucurbita pepo (Zucchini)cpemeB086
MELO3C017446Cucurbita pepo (Zucchini)cpemeB330
MELO3C017446Cucurbita pepo (Zucchini)cpemeB615
MELO3C017446Cucurbita pepo (Zucchini)cpemeB749
MELO3C017446Bottle gourd (USVL1VR-Ls)lsimeB100
MELO3C017446Bottle gourd (USVL1VR-Ls)lsimeB397
MELO3C017446Cucumber (Gy14) v2cgybmeB039
MELO3C017446Cucumber (Gy14) v2cgybmeB093
MELO3C017446Silver-seed gourdcarmeB0599
MELO3C017446Silver-seed gourdcarmeB0601
MELO3C017446Silver-seed gourdcarmeB0785
MELO3C017446Silver-seed gourdcarmeB0969
MELO3C017446Cucumber (Chinese Long) v3cucmeB043
MELO3C017446Cucumber (Chinese Long) v3cucmeB114
MELO3C017446Watermelon (97103) v2mewmbB241
MELO3C017446Watermelon (97103) v2mewmbB261
MELO3C017446Wax gourdmewgoB272
MELO3C017446Wax gourdmewgoB307
MELO3C017446Melon (DHL92) v3.5.1memeB110
MELO3C017446Cucumber (Gy14) v1cgymeB087
MELO3C017446Cucumber (Gy14) v1cgymeB104
MELO3C017446Cucurbita maxima (Rimu)cmameB067
MELO3C017446Cucurbita maxima (Rimu)cmameB113
MELO3C017446Cucurbita maxima (Rimu)cmameB120
MELO3C017446Cucurbita maxima (Rimu)cmameB153
MELO3C017446Cucurbita maxima (Rimu)cmameB720
MELO3C017446Cucurbita moschata (Rifu)cmomeB059
MELO3C017446Cucurbita moschata (Rifu)cmomeB104
MELO3C017446Cucurbita moschata (Rifu)cmomeB109
MELO3C017446Cucurbita moschata (Rifu)cmomeB142
MELO3C017446Cucurbita moschata (Rifu)cmomeB711
MELO3C017446Wild cucumber (PI 183967)cpimeB043
MELO3C017446Wild cucumber (PI 183967)cpimeB108
MELO3C017446Cucumber (Chinese Long) v2cumeB042
MELO3C017446Cucumber (Chinese Long) v2cumeB108
MELO3C017446Watermelon (Charleston Gray)mewcgB234
MELO3C017446Watermelon (Charleston Gray)mewcgB254
MELO3C017446Watermelon (97103) v1mewmB288
MELO3C017446Watermelon (97103) v1mewmB289