MELO3C017386.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C017386.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	Arginine decarboxylase, putative
Location	chr02 : 23748446 .. 23751232 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGCCTCGATCGAACGTAATACACGGTTGAAAGAAGGCAAAAACACGGAGGCGAAAGTGAAGAAAGAAGATGAGGCGTAAACACGGTTGAAAGAAGGCGGCAACACGGGTTGAAGGAGGCGGCAACACAGGTTCAACGAGGTGCAACACGGATTGGAAAGGAAATTCGACAGGGGGGTTTCAAAGAAATTTTTTTTATGAAACCGGTTTATGGAAACCCTAAAACTAGGGTTTCCATAAACCGTGGGCCAAACGGGGTTAGGGTTGGACTAACCCAAGCCCACAGTGCTAACCCTAACCTCAAACAGCCCCTTAGTGATCCTTGTTGAGTACAAAGAATGTGGGGTAGACTTTTGGGGGATGGTATGCTCCAAGTTGAAAACATCTGTGTATTCCTCTTTTATCACTGAGCTAAGCTCATGTTAGTGAATTGTATTCTATGAGATTGTGTGAACATTAATCTTTCCCCGTTTTATTTTCATTCCATTTACTCTAATAAAAAATGATGGTGGGTGCTCGAAACATAAACTATGGTCCTCCAAGAAAATATTTTATTTCTCTATTCCATGAGCTGTGTTTTTAGCTGCTGTTATGAAATCACCAATCAAAGATAAATAGAAATTTTAATCGGTAGAAAATCATAGAGTTTATATAGCCTATTCTTTAAATCATAGGACCAAATTTGTAAATAACTAAGCAAACATAAATAAGAATACAAAGCATTCAAACAAGTGTCTTCATTGCTCAAGATGGACATTTATTTATTATTGTCTATTTTTATCTGAAACTTAATTTGTTAGACTTATTTCTCCTGGTTAACTCAAGTTCTTCCATTTTTCCTACAAGAAACAAAAAATGAAGAGCCAGAGCACATTCAGAACACGTCAATTAAAAAAGAAAACCACCAAGAAAACAACCAGAGAATCTCCAATATCCCAGAAAGTTTGTCCTCCTCCTCTACTTAATGCATTGAAAGTTTCAGCTGAACGAAATGCGGCTCGTTTTCACTTTCCTAGGCATAATAGAGGGAGAGCAGGGCCATCATCATTTACTCAGCACATTGGTCTGAAGCCATTTATGCATGATTTACCCAACCTTCCGGAGCTAGACAACCTCTTTTATCCAGAGGGTCCAATTTTAGAAGCACAGCAGCAAGCAGCAAAACTTTTTGAAGCATCAGAAACATGGTTCCTCGTTGGAGGAACCACATGTGAAATTCAGGCTGCAATTATGGCAACTTGCTCCCCAAGAGATCATATAATTTTTCCAAGGAATTCCCATGTATCCGTCATATTGGCTTTGGTGTTATCTGGTGCAATACCGAAATACATCATGCCTATGTATGACTCCAATTGGGATATAGTTGGTGAGGTTACTCCATCAGAGGCAAGTGTGTAACACTGGTTTTAAACTCATGGATATAAACTTGTCATGTAGTGTTAAATTTTTCAATAGACTATTGCTTTATTGTTACTACTCGTTGTCTTAGCTTAGCAATATCGATCGGTAACCCTCACTACTACAAAAGAGATAACTGTTGGTTTGATATAATATTAAATGCTGCACAAGTAAGCTTTATATATTCTGGTAAACTAAACATTGATTTATTATTTAATGAAGAAAATCTTTCCTCAACTTTAAACCTTCAGTCTTGATTAATACTTGTTAATATAAAGAGTGAAATCTTTTATTGCATGCACAGGTAGATAGAGCAATCAAGTATATAGAAATGGAAGGTCAAAAAGCATCTGCAGTGTTTGTTACTTCACCTACTTAATTATCATGGCATTTGCAGTAACCTGAGTGAGATTTCTCAGATATGTTATGTTAAGGGAATTCCCTTGATTGTCGATGAGGCTCATGGGACACACTTTGGGTTTCAACCTCAGCTGCCTCTTTCTGCACTCCAACAAGGAGCTGATTTGGCGATCCAATCGACTCACAAAGTTCTCTGCTCTCTTACACAGTCATCAATGTTGCACATGTCAGGGGATCTTGTAGATAGAGAAAGAGTTTGTGGATGTTTAAAAACTCTTCAAAGCACCAGTCCTAGTTATCTGCTTCTAGCATCATTAGATTCAACCAGAGCTCAACTAAGTGATGATCCAGACAAGGTTTTCAATAGAGCAATAGATCTAGCATATCAAGCAAAAAAGCAAGATAAACAAGATTTCAAGTATCTCAATCCTTGAGTGTCCCATGTTCTCCAGCTTCCCTACTTTTGATCCATTAAGACTCACAGTTGGCTTCCAACAGCTTGGTTTTTCTGGACACGAAGCAGATGAAATACTGTACAAAAACCATAACATCGTTTGTGAACTTGTTGGGAACCAATCCATTACATTTGTCATTAACCTAGGAACATTTGAAGACGATATTGAGAGACTGGTTTCAGGTATTGAGGATGTGAGCTCTTCCGCATCGATTATGAGGATTGAAGGAAGAAGCAAACTAAGTGTTTCTGCACCCTTTCCTAATGTCAAAATCAACTTGAATCCTAGAGATGCCTTCTTTGCGAAAAAAAGAAGAGAGAACATTAAAGAATGTGTTGGAAAGGTGTGTGGAGAGTTAATATGCACATATCCTCCAGGAATACCGGTAATGATTCCGGGTGAGATTATATCTGAGGAAGCGCTGGATTATCTGTTGCATTTAAAAGACAAAGGTGCCTCAATTGTCAGTGCATCTGATCCTAAACTATCTTCACTACTTGTATGCAATGTGTAAGACTGCAAAACGCTTTGTTAAGTATATACTTGAACTGGATTCAATGGTTTGAGTAAT

mRNA sequence

ATGGAGGCCTCGATCGAACGTAATACACGGTTGAAAGAAGGCAAAAACACGGAGGCGAAAACTTATTTCTCCTGGTTAACTCAAGTTCTTCCATTTTTCCTACAAGAAACAAAAAATGAAGAGCCAGAGCACATTCAGAACACGTCAATTAAAAAAGAAAACCACCAAGAAAACAACCAGAGAATCTCCAATATCCCAGAAAGTTTGTCCTCCTCCTCTACTTAATGCATTGAAAGTTTCAGCTGAACGAAATGCGGCTCGTTTTCACTTTCCTAGGCATAATAGAGGGAGAGCAGGGCCATCATCATTTACTCAGCACATTGGTCTGAAGCCATTTATGCATGATTTACCCAACCTTCCGGAGCTAGACAACCTCTTTTATCCAGAGGGTCCAATTTTAGAAGCACAGCAGCAAGCAGCAAAACTTTTTGAAGCATCAGAAACATGGTTCCTCGTTGGAGGAACCACATGTGAAATTCAGGCTGCAATTATGGCAACTTGCTCCCCAAGAGATCATATAATTTTTCCAAGGAATTCCCATGTATCCGTCATATTGGCTTTGGTGTTATCTGGTGCAATACCGAAATACATCATGCCTATGTATGACTCCAATTGGGATATAGTTGGTGAGGTTACTCCATCAGAGGCAAATAGAGCAATCAAGTATATAGAAATGGAAGGTCAAAAAGCATCTGCAGTGTTTGTTACTTCACCTACTTAATTATCATGGCATTTGCAGTAACCTGAGTGAGATTTCTCAGATATGTTATGTTAAGGGAATTCCCTTGATTGTCGATGAGGCTCATGGGACACACTTTGGGTTTCAACCTCAGCTGCCTCTTTCTGCACTCCAACAAGGAGCTGATTTGGCGATCCAATCGACTCACAAAGTTCTCTGCTCTCTTACACAGTCATCAATGTTGCACATGTCAGGGGATCTTGTAGATAGAGAAAGAGTTTGTGGATGTTTAAAAACTCTTCAAAGCACCAGTCCTAGTTATCTGCTTCTAGCATCATTAGATTCAACCAGAGCTCAACTAAGTGATGATCCAGACAAGGTTTTCAATAGAGCAATAGATCTAGCATATCAAGCAAAAAAGCAAGATAAACAAGATTTCAAGTATCTCAATCCTTGAGTGTCCCATGTTCTCCAGCTTCCCTACTTTTGATCCATTAAGACTCACAGTTGGCTTCCAACAGCTTGGTTTTTCTGGACACGAAGCAGATGAAATACTGTACAAAAACCATAACATCGTTTGTGAACTTGTTGGGAACCAATCCATTACATTTGTCATTAACCTAGGAACATTTGAAGACGATATTGAGAGACTGGTTTCAGGTATTGAGGATGTGAGCTCTTCCGCATCGATTATGAGGATTGAAGGAAGAAGCAAACTAAGTGTTTCTGCACCCTTTCCTAATGTCAAAATCAACTTGAATCCTAGAGATGCCTTCTTTGCGAAAAAAAGAAGAGAGAACATTAAAGAATGTGTTGGAAAGGTGTGTGGAGAGTTAATATGCACATATCCTCCAGGAATACCGGTAATGATTCCGGGTGAGATTATATCTGAGGAAGCGCTGGATTATCTGTTGCATTTAAAAGACAAAGGTGCCTCAATTGTCAGTGCATCTGATCCTAAACTATCTTCACTACTTGTATGCAATGTGTAAGACTGCAAAACGCTTTGTTAAGTATATACTTGAACTGGATTCAATGGTTTGAGTAAT

Coding sequence (CDS)

ATGAAGAGCCAGAGCACATTCAGAACACGTCAATTAAAAAAGAAAACCACCAAGAAAACAACCAGAGAATCTCCAATATCCCAGAAAGTTTGTCCTCCTCCTCTACTTAATGCATTGAAAGTTTCAGCTGAACGAAATGCGGCTCGTTTTCACTTTCCTAGGCATAATAGAGGGAGAGCAGGGCCATCATCATTTACTCAGCACATTGGTCTGAAGCCATTTATGCATGATTTACCCAACCTTCCGGAGCTAGACAACCTCTTTTATCCAGAGGGTCCAATTTTAGAAGCACAGCAGCAAGCAGCAAAACTTTTTGAAGCATCAGAAACATGGTTCCTCGTTGGAGGAACCACATGTGAAATTCAGGCTGCAATTATGGCAACTTGCTCCCCAAGAGATCATATAATTTTTCCAAGGAATTCCCATGTATCCGTCATATTGGCTTTGGTGTTATCTGGTGCAATACCGAAATACATCATGCCTATGTATGACTCCAATTGGGATATAGTTGGTGAGGTTACTCCATCAGAGGCAAATAGAGCAATCAAGTATATAGAAATGGAAGGTCAAAAAGCATCTGCAGTGTTTGTTACTTCACCTACTTAA

Protein sequence

MKSQSTFRTRQLKKKTTKKTTRESPISQKVCPPPLLNALKVSAERNAARFHFPRHNRGRAGPSSFTQHIGLKPFMHDLPNLPELDNLFYPEGPILEAQQQAAKLFEASETWFLVGGTTCEIQAAIMATCSPRDHIIFPRNSHVSVILALVLSGAIPKYIMPMYDSNWDIVGEVTPSEANRAIKYIEMEGQKASAVFVTSPT

Homology

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BLAST of MELO3C017386.2 vs. NCBI nr
Match: XP_016901382.1 (PREDICTED: LOW QUALITY PROTEIN: arginine decarboxylase-like [Cucumis melo])

HSP 1 Score: 386.3 bits (991), Expect = 6.2e-104
Identity = 189/190 (99.47%), Postives = 190/190 (100.00%), Query Frame = 0


Query: 12  LKKKTTKKTTRESPISQKVCPPPLLNALKVSAERNAARFHFPRHNRGRAGPSSFTQHIGL 71
           +KKKTTKKTTRESPISQKVCPPPLLNALKVSAERNAARFHFPRHNRGRAGPSSFTQHIGL
Sbjct: 50  IKKKTTKKTTRESPISQKVCPPPLLNALKVSAERNAARFHFPRHNRGRAGPSSFTQHIGL 109

Query: 72  KPFMHDLPNLPELDNLFYPEGPILEAQQQAAKLFEASETWFLVGGTTCEIQAAIMATCSP 131
           KPFMHDLPNLPELDNLFYPEGPILEAQQQAAKLFEASETWFLVGGTTCEIQAAIMATCSP
Sbjct: 110 KPFMHDLPNLPELDNLFYPEGPILEAQQQAAKLFEASETWFLVGGTTCEIQAAIMATCSP 169

Query: 132 RDHIIFPRNSHVSVILALVLSGAIPKYIMPMYDSNWDIVGEVTPSEANRAIKYIEMEGQK 191
           RDHIIFPRNSHVSVILALVLSGAIPKYIMPMYDSNWDIVGEVTPSEANRAIKYIEMEGQK
Sbjct: 170 RDHIIFPRNSHVSVILALVLSGAIPKYIMPMYDSNWDIVGEVTPSEANRAIKYIEMEGQK 229

Query: 192 ASAVFVTSPT 202
           ASAVFVTSPT
Sbjct: 230 ASAVFVTSPT 239

[Close]

BLAST of MELO3C017386.2 vs. NCBI nr
Match: KGN63903.1 (hypothetical protein Csa_1G025850 [Cucumis sativus])

HSP 1 Score: 327.4 bits (838), Expect = 3.4e-86
Identity = 166/200 (83.00%), Postives = 177/200 (88.50%), Query Frame = 0


Query: 2   KSQSTFRTRQLKKKTTKKTTRESPISQKVCPPPLLNALKVSAERNAARFHFPRHNRGRAG 61
           K+Q+T     ++K+TTKK  RESPISQK CPPPL+NALKVSAE+NAARFHFP HNRGRAG
Sbjct: 61  KNQNT----SIEKQTTKKAIRESPISQKGCPPPLVNALKVSAEQNAARFHFPGHNRGRAG 120

Query: 62  PSSFTQHIGLKPFMHDLPNLPELDNLFYPEGPILEAQQQAAKLFEASETWFLVGGTTCEI 121
           PSSFTQ IGLKPFMHDLP L ELDNLF PEGPILEAQQQAAKLF ASETWFLVGGTTC I
Sbjct: 121 PSSFTQLIGLKPFMHDLPKLRELDNLFCPEGPILEAQQQAAKLFGASETWFLVGGTTCGI 180

Query: 122 QAAIMATCSPRDHIIFPRNSHVSVILALVLSGAIPKYIMPMYDSNWDIVGEVTPSEANRA 181
           QAA MATCSP DHIIFPRN+HVSVI ALVLSGAIPKYIMPMYDSNWDI G VTPS+ +RA
Sbjct: 181 QAATMATCSPGDHIIFPRNAHVSVISALVLSGAIPKYIMPMYDSNWDIAGAVTPSQVDRA 240

Query: 182 IKYIEMEGQKASAVFVTSPT 202
           IK +EMEGQKASAVFV SPT
Sbjct: 241 IKDLEMEGQKASAVFVISPT 256

[Close]

BLAST of MELO3C017386.2 vs. NCBI nr
Match: XP_011650023.1 (PREDICTED: uncharacterized protein LOC101211215 [Cucumis sativus] >KGN63292.1 hypothetical protein Csa_2G424710 [Cucumis sativus])

HSP 1 Score: 315.5 bits (807), Expect = 1.3e-82
Identity = 159/192 (82.81%), Postives = 168/192 (87.50%), Query Frame = 0


Query: 10  RQLKKKTTKKTTRESPISQKVCPPPLLNALKVSAERNAARFHFPRHNRGRAGPSSFTQHI 69
           R  KK  TKK  RES ISQ+  PPPL+NALKVSA+++AARFHFP HNRGRAGP SFTQ I
Sbjct: 65  RSRKKHPTKKVIRESSISQEGSPPPLVNALKVSAQQDAARFHFPGHNRGRAGPPSFTQLI 124

Query: 70  GLKPFMHDLPNLPELDNLFYPEGPILEAQQQAAKLFEASETWFLVGGTTCEIQAAIMATC 129
           GLKPFMHDLP LPELDNLF PEGPILEAQQQAAKLF ASETWFLVGGTTC IQAAIMATC
Sbjct: 125 GLKPFMHDLPELPELDNLFCPEGPILEAQQQAAKLFGASETWFLVGGTTCGIQAAIMATC 184

Query: 130 SPRDHIIFPRNSHVSVILALVLSGAIPKYIMPMYDSNWDIVGEVTPSEANRAIKYIEMEG 189
           SP DHII PRNSHVSVI ALVLSGAIPKYIMP+YDSNWDI G VTPS+  RAIK +E+EG
Sbjct: 185 SPGDHIILPRNSHVSVISALVLSGAIPKYIMPVYDSNWDIAGVVTPSQIGRAIKDLEVEG 244

Query: 190 QKASAVFVTSPT 202
           QKASAVFVTSPT
Sbjct: 245 QKASAVFVTSPT 256

[Close]

BLAST of MELO3C017386.2 vs. NCBI nr
Match: XP_022134879.1 (uncharacterized protein LOC111007031 [Momordica charantia])

HSP 1 Score: 299.3 bits (765), Expect = 9.9e-78
Identity = 151/189 (79.89%), Postives = 161/189 (85.19%), Query Frame = 0


Query: 13  KKKTTKKTTRESPISQKVCPPPLLNALKVSAERNAARFHFPRHNRGRAGPSSFTQHIGLK 72
           K+ T K    ESPIS++ C PPL+NALK+SAE+NAARFHFP HNRGRA PSSFTQ IGLK
Sbjct: 55  KQSTAKIAISESPISKESC-PPLVNALKISAEQNAARFHFPGHNRGRAAPSSFTQLIGLK 114

Query: 73  PFMHDLPNLPELDNLFYPEGPILEAQQQAAKLFEASETWFLVGGTTCEIQAAIMATCSPR 132
           PFMHDLP LPELDNLF PEGPILEAQQQAAKLF A ETWFLVGGTTC IQ AIMATCSP 
Sbjct: 115 PFMHDLPELPELDNLFCPEGPILEAQQQAAKLFGAFETWFLVGGTTCGIQTAIMATCSPG 174

Query: 133 DHIIFPRNSHVSVILALVLSGAIPKYIMPMYDSNWDIVGEVTPSEANRAIKYIEMEGQKA 192
           +HII PRNSHVSVI ALVLSGAIPKYIMP YDSNWDI G VTPS+ ++AIK  EMEG K 
Sbjct: 175 EHIIIPRNSHVSVISALVLSGAIPKYIMPEYDSNWDIAGGVTPSQVDKAIKDSEMEGHKV 234

Query: 193 SAVFVTSPT 202
           SAVFVTSPT
Sbjct: 235 SAVFVTSPT 242

[Close]

BLAST of MELO3C017386.2 vs. NCBI nr
Match: XP_022921561.1 (uncharacterized protein LOC111429785 isoform X2 [Cucurbita moschata])

HSP 1 Score: 298.1 bits (762), Expect = 2.2e-77
Identity = 152/190 (80.00%), Postives = 164/190 (86.32%), Query Frame = 0


Query: 13  KKKTTKKTTRESPISQKVCPP-PLLNALKVSAERNAARFHFPRHNRGRAGPSSFTQHIGL 72
           KK+T+ K   ESPISQ+     PL+NALKVSAE++AARFHFP HN GRA PSSFTQ IGL
Sbjct: 54  KKQTSTKAIGESPISQEGSSTLPLVNALKVSAEKDAARFHFPGHNGGRAAPSSFTQLIGL 113

Query: 73  KPFMHDLPNLPELDNLFYPEGPILEAQQQAAKLFEASETWFLVGGTTCEIQAAIMATCSP 132
           KPFMHDLP LPELDNLF PEGPILEAQQQAAKLF ASETWFLVGGTTC IQAAIMATCSP
Sbjct: 114 KPFMHDLPELPELDNLFCPEGPILEAQQQAAKLFGASETWFLVGGTTCGIQAAIMATCSP 173

Query: 133 RDHIIFPRNSHVSVILALVLSGAIPKYIMPMYDSNWDIVGEVTPSEANRAIKYIEMEGQK 192
            DHII PRNSH+SVI ALV+SGAIPKYIMP YDSNWDI G VTPS+ +RAI+ +EMEGQK
Sbjct: 174 GDHIILPRNSHISVISALVISGAIPKYIMPEYDSNWDIAGGVTPSQVDRAIEDLEMEGQK 233

Query: 193 ASAVFVTSPT 202
           ASAV VTSPT
Sbjct: 234 ASAVLVTSPT 243

[Close]

BLAST of MELO3C017386.2 vs. Swiss-Prot
Match: sp|P21885|SPEA_BACSU (Arginine decarboxylase OS=Bacillus subtilis (strain 168) OX=224308 GN=speA PE=1 SV=2)

HSP 1 Score: 117.5 bits (293), Expect = 1.7e-25
Identity = 67/168 (39.88%), Postives = 87/168 (51.79%), Query Frame = 0


Query: 34  PLLNALKVSAERNAARFHFPRHNRGRAGPSSFTQHIGLKPFMHDLPNLPELDNLFYPEGP 93
           PL   LK  A R   +FH P H +G      F Q IG      DL N+  LD+L  P+G 
Sbjct: 7   PLYTGLKKHASRQPVQFHIPGHKKGAGMDPEFRQFIGENALSIDLINIEPLDDLHAPKGI 66

Query: 94  ILEAQQQAAKLFEASETWFLVGGTTCEIQAAIMATCSPRDHIIFPRNSHVSVILALVLSG 153
           I +AQ  AA+ F A  T+F V GT+  I   +MA C P D II PRN H S++ A+V SG
Sbjct: 67  IKQAQDLAAEAFGADHTFFSVQGTSGAIMTMVMAVCGPGDKIIIPRNVHKSIMTAIVFSG 126

Query: 154 AIPKYIMPMYDSNWDIVGEVTPSEANRAIKYIEMEGQKASAVFVTSPT 202
           A+P +I P  D+   I   +T   A RA+     E   A  + V +PT
Sbjct: 127 AVPIFIHPEIDNELGISHGITLESAKRAL----TEHPDAKGLLVINPT 170

[Close]

BLAST of MELO3C017386.2 vs. Swiss-Prot
Match: sp|Q819L4|SPEA_BACCR (Arginine decarboxylase OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NRRL B-3711) OX=226900 GN=speA PE=3 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.3e-23
Identity = 61/168 (36.31%), Postives = 89/168 (52.98%), Query Frame = 0


Query: 34  PLLNALKVSAERNAARFHFPRHNRGRAGPSSFTQHIGLKPFMHDLPNLPELDNLFYPEGP 93
           PL  AL   ++RN  +FH P H +G+    +F + IG      DL N+  LD+L +P+G 
Sbjct: 7   PLFTALVEHSKRNPIQFHIPGHKKGQGMDPTFREFIGHNALAIDLINIAPLDDLHHPKGM 66

Query: 94  ILEAQQQAAKLFEASETWFLVGGTTCEIQAAIMATCSPRDHIIFPRNSHVSVILALVLSG 153
           I EAQ  AA  F A  T+F + GT+  I   +M+ C P D I+ PRN H SV+ A++ SG
Sbjct: 67  IKEAQDLAAAAFGADHTFFSIQGTSGAIMTMVMSVCGPGDKILVPRNVHKSVMSAIIFSG 126

Query: 154 AIPKYIMPMYDSNWDIVGEVTPSEANRAIKYIEMEGQKASAVFVTSPT 202
           A P ++ P  D    I   +T     +A++    E   A  + V +PT
Sbjct: 127 AKPIFMHPEIDPKLGISHGITIQSVKKALE----EHSDAKGLLVINPT 170

[Close]

BLAST of MELO3C017386.2 vs. Swiss-Prot
Match: sp|Q81MS2|SPEA_BACAN (Arginine decarboxylase OS=Bacillus anthracis OX=1392 GN=speA PE=3 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.6e-23
Identity = 61/168 (36.31%), Postives = 88/168 (52.38%), Query Frame = 0


Query: 34  PLLNALKVSAERNAARFHFPRHNRGRAGPSSFTQHIGLKPFMHDLPNLPELDNLFYPEGP 93
           PL  AL   ++RN  +FH P H +G+     F + IG      DL N+  LD+L +P+G 
Sbjct: 10  PLFTALVEHSKRNPIQFHIPGHKKGQGMDPEFREFIGHNALAIDLINIAPLDDLHHPKGM 69

Query: 94  ILEAQQQAAKLFEASETWFLVGGTTCEIQAAIMATCSPRDHIIFPRNSHVSVILALVLSG 153
           I EAQ  AA  F A  T+F + GT+  I   +M+ C P D I+ PRN H SV+ A++ SG
Sbjct: 70  IKEAQDLAAAAFGADHTFFSIQGTSGAIMTMVMSVCGPGDKILVPRNVHKSVMSAIIFSG 129

Query: 154 AIPKYIMPMYDSNWDIVGEVTPSEANRAIKYIEMEGQKASAVFVTSPT 202
           A P ++ P  D    I   +T     +A++    E   A  + V +PT
Sbjct: 130 AKPIFMHPEIDPKLGISHGITIQSVKKALE----EHSDAKGLLVINPT 173

[Close]

BLAST of MELO3C017386.2 vs. Swiss-Prot
Match: sp|Q9K9K5|SPEA_BACHD (Arginine decarboxylase OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) OX=272558 GN=speA PE=3 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 9.9e-21
Identity = 56/149 (37.58%), Postives = 78/149 (52.35%), Query Frame = 0


Query: 34  PLLNALKVSAERNAARFHFPRHNRGRAGPSSFTQHIGLKPFMHDLPNLPELDNLFYPEGP 93
           PL + +   A+ N  +FH P H +G     +F   IG      DL N+  LD+L +P G 
Sbjct: 8   PLFSGVVAHAKHNPVQFHIPGHKKGAGMDPAFRSFIGDNALSIDLINIGPLDDLHHPHGI 67

Query: 94  ILEAQQQAAKLFEASETWFLVGGTTCEIQAAIMATCSPRDHIIFPRNSHVSVILALVLSG 153
           I EAQ+ AA+ F A  T+F V GT+  I   IM+   P + II PRN H S++ A+V SG
Sbjct: 68  IKEAQELAAEAFGADHTFFSVQGTSGAIMTMIMSVVGPGEKIIVPRNVHKSIMSAIVFSG 127

Query: 154 AIPKYIMPMYDSNWDIVGEVTPSEANRAI 183
           A P +I P  D    I   +T     +A+
Sbjct: 128 ATPVFIHPEIDPLLGISHGITIEAVEKAL 156

[Close]

BLAST of MELO3C017386.2 vs. Swiss-Prot
Match: sp|P37536|YAAO_BACSU (Uncharacterized protein YaaO OS=Bacillus subtilis (strain 168) OX=224308 GN=yaaO PE=3 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 7.9e-18
Identity = 61/172 (35.47%), Postives = 87/172 (50.58%), Query Frame = 0


Query: 34  PLLNALKVSAERNAARFHFPRHNRGRA----GPSSFTQHIGLKPFMHDLPNLPELDNLFY 93
           PL  AL   A RN+  FH P H+ G        S F   + +     D+  L  LD+L +
Sbjct: 4   PLYKALIQHARRNSHSFHVPGHHNGDVFFDDAKSIFDPLLTI-----DVTELAGLDDLHH 63

Query: 94  PEGPILEAQQQAAKLFEASETWFLVGGTTCEIQAAIMATCSPRDHIIFPRNSHVSVILAL 153
           P G I EAQ+ A++L+ ++E++FLV GTT    A I++ C P D I+  RN H SV  A+
Sbjct: 64  PSGVIKEAQELASQLYGSAESFFLVNGTTVGNLAMILSVCEPGDTILVQRNCHKSVFHAV 123

Query: 154 VLSGAIPKYIMPMYDSNWDIVGEVTPSEANRAIKYIEMEGQKASAVFVTSPT 202
            LSGA P Y+ P  DS   +   V       A++        A  + +T+PT
Sbjct: 124 DLSGAEPVYLAPDVDSAMHVPTHVPLGTIKEALEAY----PDAKGLVLTNPT 166

[Close]

BLAST of MELO3C017386.2 vs. TrEMBL
Match: tr|A0A1S4DZG6|A0A1S4DZG6_CUCME (LOW QUALITY PROTEIN: arginine decarboxylase-like OS=Cucumis melo OX=3656 GN=LOC103494341 PE=4 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 4.1e-104
Identity = 189/190 (99.47%), Postives = 190/190 (100.00%), Query Frame = 0


Query: 12  LKKKTTKKTTRESPISQKVCPPPLLNALKVSAERNAARFHFPRHNRGRAGPSSFTQHIGL 71
           +KKKTTKKTTRESPISQKVCPPPLLNALKVSAERNAARFHFPRHNRGRAGPSSFTQHIGL
Sbjct: 50  IKKKTTKKTTRESPISQKVCPPPLLNALKVSAERNAARFHFPRHNRGRAGPSSFTQHIGL 109

Query: 72  KPFMHDLPNLPELDNLFYPEGPILEAQQQAAKLFEASETWFLVGGTTCEIQAAIMATCSP 131
           KPFMHDLPNLPELDNLFYPEGPILEAQQQAAKLFEASETWFLVGGTTCEIQAAIMATCSP
Sbjct: 110 KPFMHDLPNLPELDNLFYPEGPILEAQQQAAKLFEASETWFLVGGTTCEIQAAIMATCSP 169

Query: 132 RDHIIFPRNSHVSVILALVLSGAIPKYIMPMYDSNWDIVGEVTPSEANRAIKYIEMEGQK 191
           RDHIIFPRNSHVSVILALVLSGAIPKYIMPMYDSNWDIVGEVTPSEANRAIKYIEMEGQK
Sbjct: 170 RDHIIFPRNSHVSVILALVLSGAIPKYIMPMYDSNWDIVGEVTPSEANRAIKYIEMEGQK 229

Query: 192 ASAVFVTSPT 202
           ASAVFVTSPT
Sbjct: 230 ASAVFVTSPT 239

[Close]

BLAST of MELO3C017386.2 vs. TrEMBL
Match: tr|A0A0A0LQ21|A0A0A0LQ21_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025850 PE=4 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 2.2e-86
Identity = 166/200 (83.00%), Postives = 177/200 (88.50%), Query Frame = 0


Query: 2   KSQSTFRTRQLKKKTTKKTTRESPISQKVCPPPLLNALKVSAERNAARFHFPRHNRGRAG 61
           K+Q+T     ++K+TTKK  RESPISQK CPPPL+NALKVSAE+NAARFHFP HNRGRAG
Sbjct: 61  KNQNT----SIEKQTTKKAIRESPISQKGCPPPLVNALKVSAEQNAARFHFPGHNRGRAG 120

Query: 62  PSSFTQHIGLKPFMHDLPNLPELDNLFYPEGPILEAQQQAAKLFEASETWFLVGGTTCEI 121
           PSSFTQ IGLKPFMHDLP L ELDNLF PEGPILEAQQQAAKLF ASETWFLVGGTTC I
Sbjct: 121 PSSFTQLIGLKPFMHDLPKLRELDNLFCPEGPILEAQQQAAKLFGASETWFLVGGTTCGI 180

Query: 122 QAAIMATCSPRDHIIFPRNSHVSVILALVLSGAIPKYIMPMYDSNWDIVGEVTPSEANRA 181
           QAA MATCSP DHIIFPRN+HVSVI ALVLSGAIPKYIMPMYDSNWDI G VTPS+ +RA
Sbjct: 181 QAATMATCSPGDHIIFPRNAHVSVISALVLSGAIPKYIMPMYDSNWDIAGAVTPSQVDRA 240

Query: 182 IKYIEMEGQKASAVFVTSPT 202
           IK +EMEGQKASAVFV SPT
Sbjct: 241 IKDLEMEGQKASAVFVISPT 256

[Close]

BLAST of MELO3C017386.2 vs. TrEMBL
Match: tr|A0A0A0LR51|A0A0A0LR51_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G424710 PE=4 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 8.8e-83
Identity = 159/192 (82.81%), Postives = 168/192 (87.50%), Query Frame = 0


Query: 10  RQLKKKTTKKTTRESPISQKVCPPPLLNALKVSAERNAARFHFPRHNRGRAGPSSFTQHI 69
           R  KK  TKK  RES ISQ+  PPPL+NALKVSA+++AARFHFP HNRGRAGP SFTQ I
Sbjct: 65  RSRKKHPTKKVIRESSISQEGSPPPLVNALKVSAQQDAARFHFPGHNRGRAGPPSFTQLI 124

Query: 70  GLKPFMHDLPNLPELDNLFYPEGPILEAQQQAAKLFEASETWFLVGGTTCEIQAAIMATC 129
           GLKPFMHDLP LPELDNLF PEGPILEAQQQAAKLF ASETWFLVGGTTC IQAAIMATC
Sbjct: 125 GLKPFMHDLPELPELDNLFCPEGPILEAQQQAAKLFGASETWFLVGGTTCGIQAAIMATC 184

Query: 130 SPRDHIIFPRNSHVSVILALVLSGAIPKYIMPMYDSNWDIVGEVTPSEANRAIKYIEMEG 189
           SP DHII PRNSHVSVI ALVLSGAIPKYIMP+YDSNWDI G VTPS+  RAIK +E+EG
Sbjct: 185 SPGDHIILPRNSHVSVISALVLSGAIPKYIMPVYDSNWDIAGVVTPSQIGRAIKDLEVEG 244

Query: 190 QKASAVFVTSPT 202
           QKASAVFVTSPT
Sbjct: 245 QKASAVFVTSPT 256

[Close]

BLAST of MELO3C017386.2 vs. TrEMBL
Match: tr|U5FGE7|U5FGE7_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_018G145600v3 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 3.0e-70
Identity = 133/184 (72.28%), Postives = 150/184 (81.52%), Query Frame = 0


Query: 18  KKTTRESPISQKVCPPPLLNALKVSAERNAARFHFPRHNRGRAGPSSFTQHIGLKPFMHD 77
           K     S ISQ+   PPL+ ALK SAE+NAA FHFP HNRGRA PSS TQ IGL+PF+HD
Sbjct: 62  KSLISRSRISQQDSLPPLVGALKASAEKNAASFHFPGHNRGRAAPSSLTQLIGLRPFIHD 121

Query: 78  LPNLPELDNLFYPEGPILEAQQQAAKLFEASETWFLVGGTTCEIQAAIMATCSPRDHIIF 137
           LP LPELDNLF PEGPILEAQ QAAKLF +SETWFLVGGTTC IQAAIMATCSP +HI+ 
Sbjct: 122 LPELPELDNLFSPEGPILEAQMQAAKLFGSSETWFLVGGTTCGIQAAIMATCSPGEHIVL 181

Query: 138 PRNSHVSVILALVLSGAIPKYIMPMYDSNWDIVGEVTPSEANRAIKYIEMEGQKASAVFV 197
           PRNSH+S I A+VLSGAIPKYIMP YD  WDI G VTPS+  +AIK +EM+G+K +AVF+
Sbjct: 182 PRNSHISAISAMVLSGAIPKYIMPGYDCKWDIAGGVTPSQVGKAIKELEMDGKKPAAVFI 241

Query: 198 TSPT 202
           TSPT
Sbjct: 242 TSPT 245

[Close]

BLAST of MELO3C017386.2 vs. TrEMBL
Match: tr|A0A2R6S273|A0A2R6S273_ACTCH (Arginine decarboxylase OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc00875 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 1.2e-68
Identity = 130/190 (68.42%), Postives = 156/190 (82.11%), Query Frame = 0


Query: 15  KTTKKTTRESPISQKVCP---PPLLNALKVSAERNAARFHFPRHNRGRAGPSSFTQHIGL 74
           +TT K    SP SQK+     PPL+ ALK SAE+NAA FHFP HNRGRA PSS +Q IG+
Sbjct: 51  QTTTKDRNTSPKSQKIQVDDLPPLVGALKASAEQNAASFHFPGHNRGRAAPSSLSQLIGI 110

Query: 75  KPFMHDLPNLPELDNLFYPEGPILEAQQQAAKLFEASETWFLVGGTTCEIQAAIMATCSP 134
           +PF+HDLP LPELDNLF PEGPIL+AQ++AAKLF ASETWFLVGGTTC IQAAIMATC+P
Sbjct: 111 RPFLHDLPELPELDNLFAPEGPILDAQKEAAKLFGASETWFLVGGTTCGIQAAIMATCTP 170

Query: 135 RDHIIFPRNSHVSVILALVLSGAIPKYIMPMYDSNWDIVGEVTPSEANRAIKYIEMEGQK 194
            D++I PRNSH+S I A+VL G +PKYI+P YD+ WDI G VTPS+ ++A+K +EMEG+K
Sbjct: 171 GDYLILPRNSHISAISAMVLCGVLPKYIIPEYDTEWDIAGGVTPSQVDQAMKELEMEGRK 230

Query: 195 ASAVFVTSPT 202
           A+AVFVTSPT
Sbjct: 231 AAAVFVTSPT 240

The following BLAST results are available for this feature:

BLAST of MELO3C017386.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016901382.1	6.2e-104	99.47	PREDICTED: LOW QUALITY PROTEIN: arginine decarboxylase-like [Cucumis melo]	[more]
KGN63903.1	3.4e-86	83.00	hypothetical protein Csa_1G025850 [Cucumis sativus]	[more]
XP_011650023.1	1.3e-82	82.81	PREDICTED: uncharacterized protein LOC101211215 [Cucumis sativus] >KGN63292.1 hy...	[more]
XP_022134879.1	9.9e-78	79.89	uncharacterized protein LOC111007031 [Momordica charantia]	[more]
XP_022921561.1	2.2e-77	80.00	uncharacterized protein LOC111429785 isoform X2 [Cucurbita moschata]	[more]

BLAST of MELO3C017386.2 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of MELO3C017386.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P21885\|SPEA_BACSU	1.7e-25	39.88	Arginine decarboxylase OS=Bacillus subtilis (strain 168) OX=224308 GN=speA PE=1 ...	[more]
sp\|Q819L4\|SPEA_BACCR	1.3e-23	36.31	Arginine decarboxylase OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152...	[more]
sp\|Q81MS2\|SPEA_BACAN	1.6e-23	36.31	Arginine decarboxylase OS=Bacillus anthracis OX=1392 GN=speA PE=3 SV=1	[more]
sp\|Q9K9K5\|SPEA_BACHD	9.9e-21	37.58	Arginine decarboxylase OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 /...	[more]
sp\|P37536\|YAAO_BACSU	7.9e-18	35.47	Uncharacterized protein YaaO OS=Bacillus subtilis (strain 168) OX=224308 GN=yaaO...	[more]

BLAST of MELO3C017386.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4DZG6\|A0A1S4DZG6_CUCME	4.1e-104	99.47	LOW QUALITY PROTEIN: arginine decarboxylase-like OS=Cucumis melo OX=3656 GN=LOC1...	[more]
tr\|A0A0A0LQ21\|A0A0A0LQ21_CUCSA	2.2e-86	83.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025850 PE=4 SV=1	[more]
tr\|A0A0A0LR51\|A0A0A0LR51_CUCSA	8.8e-83	82.81	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G424710 PE=4 SV=1	[more]
tr\|U5FGE7\|U5FGE7_POPTR	3.0e-70	72.28	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_018G145600v3 PE=...	[more]
tr\|A0A2R6S273\|A0A2R6S273_ACTCH	1.2e-68	68.42	Arginine decarboxylase OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003824	catalytic activity

Vocabulary: **INTERPRO**
Term	Definition
IPR015424	PyrdxlP-dep_Trfase
IPR000310	Orn/Lys/Arg_deCO2ase_major_dom
IPR015421	PyrdxlP-dep_Trfase_major

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006525	arginine metabolic process
biological_process	GO:0006560	proline metabolic process
biological_process	GO:0008152	metabolic process
biological_process	GO:0009821	alkaloid biosynthetic process
biological_process	GO:0006554	lysine catabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008792	arginine decarboxylase activity
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0016829	lyase activity
molecular_function	GO:0016831	carboxy-lyase activity
molecular_function	GO:0008923	lysine decarboxylase activity
molecular_function	GO:0030170	pyridoxal phosphate binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C017386.2.1	MELO3C017386.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015421	Pyridoxal phosphate-dependent transferase, major domain	GENE3D	G3DSA:3.40.640.10		coord: 33..201 e-value: 7.6E-48 score: 165.2
IPR000310	Orn/Lys/Arg decarboxylase, major domain	PFAM	PF01276	OKR_DC_1	coord: 33..181 e-value: 7.4E-32 score: 110.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	PANTHER	PTHR43277:SF1	SUBFAMILY NOT NAMED	coord: 31..201
None	No IPR available	PANTHER	PTHR43277	FAMILY NOT NAMED	coord: 31..201
IPR015424	Pyridoxal phosphate-dependent transferase	SUPERFAMILY	SSF53383	PLP-dependent transferases	coord: 33..201

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C017386.2	Csa1G025850	Cucumber (Chinese Long) v2	cumedB047
MELO3C017386.2	CSPI01G04610	Wild cucumber (PI 183967)	cpimedB050
MELO3C017386.2	Cucsa.111810	Cucumber (Gy14) v1	cgymedB159
MELO3C017386.2	CmaCh10G003460	Cucurbita maxima (Rimu)	cmamedB070
MELO3C017386.2	CmoCh10G003750	Cucurbita moschata (Rifu)	cmomedB062
MELO3C017386.2	Lsi06G012460	Bottle gourd (USVL1VR-Ls)	lsimedB419
MELO3C017386.2	Cp4.1LG18g06740	Cucurbita pepo (Zucchini)	cpemedB388
MELO3C017386.2	CsGy1G004510	Cucumber (Gy14) v2	cgybmedB044
MELO3C017386.2	Cla018896	Watermelon (97103) v1	medwmB283
MELO3C017386.2	ClCG06G014050	Watermelon (Charleston Gray)	medwcgB246
MELO3C017386.2	Cla97C06G123500	Watermelon (97103) v2	medwmbB247
MELO3C017386.2	Bhi02G000130	Wax gourd	medwgoB304
MELO3C017386.2	Carg15194	Silver-seed gourd	carmedB0797
MELO3C017386.2	CsaV3_1G004600	Cucumber (Chinese Long) v3	cucmedB051

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C017386.2	Cucurbita moschata (Rifu)	cmomedB117
MELO3C017386.2	Cucurbita maxima (Rimu)	cmamedB128
MELO3C017386.2	Cucurbita pepo (Zucchini)	cpemedB727
MELO3C017386.2	Silver-seed gourd	carmedB0606