MELO3C017355 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C017355
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionWUSCHEL-related homeobox 1
Locationchr2 : 23178908 .. 23179586 (-)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGGACGTTAGGTTATGATGACAATGGCGGAGAATTTTGCTTCTCAGAGGCCGCCTTCTTTCATGCCGCTCGTAAGCTTCGACCTCTCCTCCCTCGCCCATTGCTATCCCTTCGTGCCAACGGTCCTCCTAACTTCTCTTCTCAATATCACCACATCGGTATACATGTCTAGCTTCTTTTTCTTAAAACCTAATCTGTTAAAATCTAAAACATATTCTATTGTTGAGAACGAATTTATTGCATTGTATTTCCACCTGATGTTATTAGGGTTGGAAGGCAATAATAATGTATGAGTTGGGTGATCGGATTTTCTTGTAGGTAATGTTTTGGATGAGGAAAGGAAGAGAGAGTACTTGTTGAATAATGAAAAGAGTTCATCGTCATCATCAACGTCAAGTACTACTCCAACAATACCAATAGTAGTGAGCTCATCGAGATGGAATCCAACGGTGGAGCAGTTGAGAATTCTGGAGGAGCTTTACCGGCGGGGGACAAGAACGCCCTCCGCCGATCAAATCCAACACATCACCGCCCAGCTCCGCCGCTTTGGCAAAATAGAAGGCAAAAATGTGTTTTATTGGTTTCAAAATCACAAGGCTAGAGAACGCCAAAAACGACGCCGTCAAACTGCCGCCGATCAAACCAAATATTCCGGTAAAAACATTTTCATGTATTAA

mRNA sequence

ATGTGGACGTTAGGTTATGATGACAATGGCGGAGAATTTTGCTTCTCAGAGGCCGCCTTCTTTCATGCCGCTCGTAAGCTTCGACCTCTCCTCCCTCGCCCATTGCTATCCCTTCGTGCCAACGGTCCTCCTAACTTCTCTTCTCAATATCACCACATCGGTAATGTTTTGGATGAGGAAAGGAAGAGAGAGTACTTGTTGAATAATGAAAAGAGTTCATCGTCATCATCAACGTCAAGTACTACTCCAACAATACCAATAGTAGTGAGCTCATCGAGATGGAATCCAACGGTGGAGCAGTTGAGAATTCTGGAGGAGCTTTACCGGCGGGGGACAAGAACGCCCTCCGCCGATCAAATCCAACACATCACCGCCCAGCTCCGCCGCTTTGGCAAAATAGAAGGCAAAAATGTGTTTTATTGGTTTCAAAATCACAAGGCTAGAGAACGCCAAAAACGACGCCGTCAAACTGCCGCCGATCAAACCAAATATTCCGGTAAAAACATTTTCATGTATTAA

Coding sequence (CDS)

ATGTGGACGTTAGGTTATGATGACAATGGCGGAGAATTTTGCTTCTCAGAGGCCGCCTTCTTTCATGCCGCTCGTAAGCTTCGACCTCTCCTCCCTCGCCCATTGCTATCCCTTCGTGCCAACGGTCCTCCTAACTTCTCTTCTCAATATCACCACATCGGTAATGTTTTGGATGAGGAAAGGAAGAGAGAGTACTTGTTGAATAATGAAAAGAGTTCATCGTCATCATCAACGTCAAGTACTACTCCAACAATACCAATAGTAGTGAGCTCATCGAGATGGAATCCAACGGTGGAGCAGTTGAGAATTCTGGAGGAGCTTTACCGGCGGGGGACAAGAACGCCCTCCGCCGATCAAATCCAACACATCACCGCCCAGCTCCGCCGCTTTGGCAAAATAGAAGGCAAAAATGTGTTTTATTGGTTTCAAAATCACAAGGCTAGAGAACGCCAAAAACGACGCCGTCAAACTGCCGCCGATCAAACCAAATATTCCGGTAAAAACATTTTCATGTATTAA

Protein sequence

MWTLGYDDNGGEFCFSEAAFFHAARKLRPLLPRPLLSLRANGPPNFSSQYHHIGNVLDEERKREYLLNNEKSSSSSSTSSTTPTIPIVVSSSRWNPTVEQLRILEELYRRGTRTPSADQIQHITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQTAADQTKYSGKNIFMY*
Homology
[Close]
BLAST of MELO3C017355 vs. Swiss-Prot
Match: WOX1_ARATH (WUSCHEL-related homeobox 1 OS=Arabidopsis thaliana GN=WOX1 PE=2 SV=2)

HSP 1 Score: 158.3 bits (399), Expect = 7.6e-38
Identity = 85/160 (53.12%), Postives = 103/160 (64.38%), Query Frame = 1 

Query: 1   MWTLGYDDNGGEFCFSEAAFFHAARKLRPLLPR----PLLSLRANGPPNFSSQYHHIGNV 60
           MWT+GY++ G +        F+  RKLRPL+PR    P  ++  N    F+     +  +
Sbjct: 1   MWTMGYNEGGADS-------FNGGRKLRPLIPRLTSCPTAAVNTNSDHRFNMA---VVTM 60

Query: 61  LDEERKREYLLNNEKSSSSSSTSSTTPTIPIVVSSSRWNPTVEQLRILEELYRRGTRTPS 120
             E+ KRE ++ N +           P  P V+ SSRWNPT +QLR+LEELYR+GTRTPS
Sbjct: 61  TAEQNKRELMMLNSE-----------PQHPPVMVSSRWNPTPDQLRVLEELYRQGTRTPS 120

Query: 121 ADQIQHITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQ 157
           AD IQ ITAQLRR+GKIEGKNVFYWFQNHKARERQKRRRQ
Sbjct: 121 ADHIQQITAQLRRYGKIEGKNVFYWFQNHKARERQKRRRQ 139

[Close]
BLAST of MELO3C017355 vs. Swiss-Prot
Match: WUS_ARATH (Protein WUSCHEL OS=Arabidopsis thaliana GN=WUS PE=1 SV=2)

HSP 1 Score: 110.2 bits (274), Expect = 2.4e-23
Identity = 64/124 (51.61%), Postives = 74/124 (59.68%), Query Frame = 1 

Query: 49  QYHHIGNVLDEERKREYLLNNEKSSSSSSTSSTTPTIPIVVSSSRWNPTVEQLRILEELY 108
           Q+HH  +  D+E       NN KS S   T   T        S+RW PT EQ++IL+ELY
Sbjct: 7   QHHH--HQADQESGNN---NNNKSGSGGYTCRQT--------STRWTPTTEQIKILKELY 66

Query: 109 -RRGTRTPSADQIQHITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQTAADQTKYSGK 168
                R+P+ADQIQ ITA+LR+FGKIEGKNVFYWFQNHKARERQK+R       T  S  
Sbjct: 67  YNNAIRSPTADQIQKITARLRQFGKIEGKNVFYWFQNHKARERQKKRFNGTNMTTPSSSP 117

Query: 169 NIFM 172
           N  M
Sbjct: 127 NSVM 117

[Close]
BLAST of MELO3C017355 vs. Swiss-Prot
Match: WOX2_ARATH (WUSCHEL-related homeobox 2 OS=Arabidopsis thaliana GN=WOX2 PE=2 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 6.9e-23
Identity = 48/70 (68.57%), Postives = 57/70 (81.43%), Query Frame = 1 

Query: 90  SSSRWNPTVEQLRILEELYRRGTRTPSADQIQHITAQLRRFGKIEGKNVFYWFQNHKARE 149
           SSSRWNPT +Q+ +LE LY+ G RTPSADQIQ IT +LR +G IEGKNVFYWFQNHKAR+
Sbjct: 11  SSSRWNPTKDQITLLENLYKEGIRTPSADQIQQITGRLRAYGHIEGKNVFYWFQNHKARQ 70

Query: 150 RQKRRRQTAA 160
           RQK++++  A
Sbjct: 71  RQKQKQERMA 80

[Close]
BLAST of MELO3C017355 vs. Swiss-Prot
Match: WOX4_ARATH (WUSCHEL-related homeobox 4 OS=Arabidopsis thaliana GN=WOX4 PE=2 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.2e-22
Identity = 60/135 (44.44%), Postives = 79/135 (58.52%), Query Frame = 1 

Query: 23  AARKLRPLLPRPLLSLRANGPPNFSSQYHHIGNVLDEERKREYLLNNEKSSSSSSTSSTT 82
           + ++LRPL P+  LS     PP+ SS       V       +  +  +++  +       
Sbjct: 26  SCKRLRPLAPK--LSGSPPSPPSSSS------GVTSATFDLKNFIRPDQTGPTKFEHKRD 85

Query: 83  PTIPIVV--SSSRWNPTVEQLRILEELYRRGTRTPSADQIQHITAQLRRFGKIEGKNVFY 142
           P   +      +RWNPT EQ+ ILE LY+ G RTP+A QI+HIT QL ++GKIEGKNVFY
Sbjct: 86  PPHQLETHPGGTRWNPTQEQIGILEMLYKGGMRTPNAQQIEHITLQLGKYGKIEGKNVFY 145

Query: 143 WFQNHKARERQKRRR 156
           WFQNHKARERQK++R
Sbjct: 146 WFQNHKARERQKQKR 152

[Close]
BLAST of MELO3C017355 vs. Swiss-Prot
Match: WOX6_ARATH (WUSCHEL-related homeobox 6 OS=Arabidopsis thaliana GN=WOX6 PE=2 SV=2)

HSP 1 Score: 107.5 bits (267), Expect = 1.5e-22
Identity = 51/85 (60.00%), Postives = 60/85 (70.59%), Query Frame = 1 

Query: 72  SSSSSSTSSTTPTIPIVVSSSRWNPTVEQLRILEELYRRGTRTPSADQIQHITAQLRRFG 131
           SS           IP   ++ RWNPT EQ+  LEELYR GTRTP+ +QIQ I ++LR++G
Sbjct: 41  SSGEHDIDERKNNIP-AAATLRWNPTPEQITTLEELYRSGTRTPTTEQIQQIASKLRKYG 100

Query: 132 KIEGKNVFYWFQNHKARERQKRRRQ 157
           +IEGKNVFYWFQNHKARER KRRR+
Sbjct: 101 RIEGKNVFYWFQNHKARERLKRRRR 124

[Close]
BLAST of MELO3C017355 vs. TrEMBL
Match: A0A0A0LSV4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G025040 PE=4 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 6.2e-79
Identity = 153/167 (91.62%), Postives = 158/167 (94.61%), Query Frame = 1 

Query: 1   MWTLGYDDNGGEFCFSEAAFFHAARKLRPLLPRPLLSLRANGP-PNFSSQYHHIGNVLDE 60
           MWTLGYDDNGGEFCFSEA  FH ARKLRPL+PRPLLSLRANG  PNFSSQY+HIGNVLDE
Sbjct: 1   MWTLGYDDNGGEFCFSEATAFHGARKLRPLVPRPLLSLRANGRRPNFSSQYYHIGNVLDE 60

Query: 61  ERKRE-YLLNNEKSSSSSSTSSTTPTIPIVVSSSRWNPTVEQLRILEELYRRGTRTPSAD 120
           ERKR+ YLLNNEKSSSSSST+S+TP   IVVSSSRWNPTVEQLRILEELYRRGTRTPSAD
Sbjct: 61  ERKRDQYLLNNEKSSSSSSTTSSTP---IVVSSSRWNPTVEQLRILEELYRRGTRTPSAD 120

Query: 121 QIQHITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQTAADQTKYS 166
           QIQHITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQTAADQTKYS
Sbjct: 121 QIQHITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQTAADQTKYS 164

[Close]
BLAST of MELO3C017355 vs. TrEMBL
Match: A0A0A0LVV6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G042780 PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 4.6e-42
Identity = 99/157 (63.06%), Postives = 115/157 (73.25%), Query Frame = 1 

Query: 1   MWTLGYDDNGGEFCFSEAAFFHAARKLRPLLPRPLLSLRANGPPN-FSSQYHHIGNVLDE 60
           MW +GY+D       S+ +F   +RKLRPL+PRPL S  ++   N F SQ+HH+   + +
Sbjct: 1   MWMMGYNDAQDLNFPSDNSF--NSRKLRPLIPRPLSSSSSSSHTNDFFSQFHHMATSVAD 60

Query: 61  ERKREYLLNNEKSSSSSSTSSTTPTIPIVVSSSRWNPTVEQLRILEELYRRGTRTPSADQ 120
           + KRE  LNN  S SSS         P VV SSRWNPT EQLR+LEELYRRGTRTPSADQ
Sbjct: 61  QSKRE--LNNVLSPSSS---------PPVVVSSRWNPTPEQLRVLEELYRRGTRTPSADQ 120

Query: 121 IQHITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQ 157
           IQHIT+QLRR+GKIEGKNVFYWFQNHKARERQKRRRQ
Sbjct: 121 IQHITSQLRRYGKIEGKNVFYWFQNHKARERQKRRRQ 144

[Close]
BLAST of MELO3C017355 vs. TrEMBL
Match: V4WEA8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10008783mg PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 4.3e-40
Identity = 100/178 (56.18%), Postives = 114/178 (64.04%), Query Frame = 1 

Query: 1   MWTLGYDDNGGEFCFSEAAFFHAARKLRPLLPRPLLSLRA--NGPP-----NFSSQYHHI 60
           MW +GY+D+G  F           RKLRPL+PRPL +  A  N P      +F    HH+
Sbjct: 1   MWMMGYNDSGDSF---------NGRKLRPLIPRPLPTTTAINNNPSRIHGADFFGLNHHL 60

Query: 61  GNVLDEERKREYLLNNEKSSSSSSTSSTTPTIPIVVSSSRWNPTVEQLRILEELYRRGTR 120
           G+   E+ KRE+             SST P    VV SSRWNPT EQLR LE+LYRRGTR
Sbjct: 61  GSHFGEQNKREF-------------SSTPP----VVVSSRWNPTPEQLRTLEDLYRRGTR 120

Query: 121 TPSADQIQHITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQ---TAADQTKYSGKN 169
           TPSADQIQHITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQ   + AD   ++  N
Sbjct: 121 TPSADQIQHITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQMESSPADHHHHNNNN 152

[Close]
BLAST of MELO3C017355 vs. TrEMBL
Match: A0A067F901_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g043602mg PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 4.3e-40
Identity = 100/178 (56.18%), Postives = 114/178 (64.04%), Query Frame = 1 

Query: 1   MWTLGYDDNGGEFCFSEAAFFHAARKLRPLLPRPLLSLRA--NGPP-----NFSSQYHHI 60
           MW +GY+D+G  F           RKLRPL+PRPL +  A  N P      +F    HH+
Sbjct: 1   MWMMGYNDSGDSF---------NGRKLRPLIPRPLPTTTAINNNPSRIHGADFFGLNHHL 60

Query: 61  GNVLDEERKREYLLNNEKSSSSSSTSSTTPTIPIVVSSSRWNPTVEQLRILEELYRRGTR 120
           G+   E+ KRE+             SST P    VV SSRWNPT EQLR LE+LYRRGTR
Sbjct: 61  GSHFGEQNKREF-------------SSTPP----VVVSSRWNPTPEQLRTLEDLYRRGTR 120

Query: 121 TPSADQIQHITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQ---TAADQTKYSGKN 169
           TPSADQIQHITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQ   + AD   ++  N
Sbjct: 121 TPSADQIQHITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQMESSPADHHHHNNNN 152

[Close]
BLAST of MELO3C017355 vs. TrEMBL
Match: A0A0L9VHS7_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan10g033900 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 2.8e-39
Identity = 90/160 (56.25%), Postives = 107/160 (66.88%), Query Frame = 1 

Query: 1   MWTLGYDDNGGEFCFSEAAFFHAARKLRPLLPRPLLSLRANGPPNFSSQYHHIGNVLDEE 60
           MW +G D+ GGEF   + +F    RKLRPL+PRP++S     P    S  HH GN    +
Sbjct: 1   MWMVG-DNEGGEFSMVDHSF--NGRKLRPLMPRPMISSNTAPPTTTLSLTHHHGNDFPSQ 60

Query: 61  RKREYLLNNEKSSSSSSTSSTTPTIPIVVSSSRWNPTVEQLRILEELYRRGTRTPSADQI 120
               +L +  + +     +   P    VV SSRWNPT EQLR LEELYRRGTRTPSA+QI
Sbjct: 61  YDYHHLASVAEQNKREQFNGAAP----VVVSSRWNPTREQLRALEELYRRGTRTPSAEQI 120

Query: 121 QHITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQTAAD 161
           QHIT+QLRRFG IEGKNVFYWFQNHKARERQKRRRQ  ++
Sbjct: 121 QHITSQLRRFGNIEGKNVFYWFQNHKARERQKRRRQMESE 153

[Close]
BLAST of MELO3C017355 vs. TAIR10
Match: AT3G18010.1 (AT3G18010.1 WUSCHEL related homeobox 1)

HSP 1 Score: 158.3 bits (399), Expect = 4.3e-39
Identity = 85/160 (53.12%), Postives = 103/160 (64.38%), Query Frame = 1 

Query: 1   MWTLGYDDNGGEFCFSEAAFFHAARKLRPLLPR----PLLSLRANGPPNFSSQYHHIGNV 60
           MWT+GY++ G +        F+  RKLRPL+PR    P  ++  N    F+     +  +
Sbjct: 1   MWTMGYNEGGADS-------FNGGRKLRPLIPRLTSCPTAAVNTNSDHRFNMA---VVTM 60

Query: 61  LDEERKREYLLNNEKSSSSSSTSSTTPTIPIVVSSSRWNPTVEQLRILEELYRRGTRTPS 120
             E+ KRE ++ N +           P  P V+ SSRWNPT +QLR+LEELYR+GTRTPS
Sbjct: 61  TAEQNKRELMMLNSE-----------PQHPPVMVSSRWNPTPDQLRVLEELYRQGTRTPS 120

Query: 121 ADQIQHITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQ 157
           AD IQ ITAQLRR+GKIEGKNVFYWFQNHKARERQKRRRQ
Sbjct: 121 ADHIQQITAQLRRYGKIEGKNVFYWFQNHKARERQKRRRQ 139

[Close]
BLAST of MELO3C017355 vs. TAIR10
Match: AT2G17950.1 (AT2G17950.1 Homeodomain-like superfamily protein)

HSP 1 Score: 110.2 bits (274), Expect = 1.3e-24
Identity = 64/124 (51.61%), Postives = 74/124 (59.68%), Query Frame = 1 

Query: 49  QYHHIGNVLDEERKREYLLNNEKSSSSSSTSSTTPTIPIVVSSSRWNPTVEQLRILEELY 108
           Q+HH  +  D+E       NN KS S   T   T        S+RW PT EQ++IL+ELY
Sbjct: 7   QHHH--HQADQESGNN---NNNKSGSGGYTCRQT--------STRWTPTTEQIKILKELY 66

Query: 109 -RRGTRTPSADQIQHITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQTAADQTKYSGK 168
                R+P+ADQIQ ITA+LR+FGKIEGKNVFYWFQNHKARERQK+R       T  S  
Sbjct: 67  YNNAIRSPTADQIQKITARLRQFGKIEGKNVFYWFQNHKARERQKKRFNGTNMTTPSSSP 117

Query: 169 NIFM 172
           N  M
Sbjct: 127 NSVM 117

[Close]
BLAST of MELO3C017355 vs. TAIR10
Match: AT5G59340.1 (AT5G59340.1 WUSCHEL related homeobox 2)

HSP 1 Score: 108.6 bits (270), Expect = 3.9e-24
Identity = 48/70 (68.57%), Postives = 57/70 (81.43%), Query Frame = 1 

Query: 90  SSSRWNPTVEQLRILEELYRRGTRTPSADQIQHITAQLRRFGKIEGKNVFYWFQNHKARE 149
           SSSRWNPT +Q+ +LE LY+ G RTPSADQIQ IT +LR +G IEGKNVFYWFQNHKAR+
Sbjct: 11  SSSRWNPTKDQITLLENLYKEGIRTPSADQIQQITGRLRAYGHIEGKNVFYWFQNHKARQ 70

Query: 150 RQKRRRQTAA 160
           RQK++++  A
Sbjct: 71  RQKQKQERMA 80

[Close]
BLAST of MELO3C017355 vs. TAIR10
Match: AT1G46480.1 (AT1G46480.1 WUSCHEL related homeobox 4)

HSP 1 Score: 107.8 bits (268), Expect = 6.6e-24
Identity = 60/135 (44.44%), Postives = 79/135 (58.52%), Query Frame = 1 

Query: 23  AARKLRPLLPRPLLSLRANGPPNFSSQYHHIGNVLDEERKREYLLNNEKSSSSSSTSSTT 82
           + ++LRPL P+  LS     PP+ SS       V       +  +  +++  +       
Sbjct: 26  SCKRLRPLAPK--LSGSPPSPPSSSS------GVTSATFDLKNFIRPDQTGPTKFEHKRD 85

Query: 83  PTIPIVV--SSSRWNPTVEQLRILEELYRRGTRTPSADQIQHITAQLRRFGKIEGKNVFY 142
           P   +      +RWNPT EQ+ ILE LY+ G RTP+A QI+HIT QL ++GKIEGKNVFY
Sbjct: 86  PPHQLETHPGGTRWNPTQEQIGILEMLYKGGMRTPNAQQIEHITLQLGKYGKIEGKNVFY 145

Query: 143 WFQNHKARERQKRRR 156
           WFQNHKARERQK++R
Sbjct: 146 WFQNHKARERQKQKR 152

[Close]
BLAST of MELO3C017355 vs. TAIR10
Match: AT2G01500.1 (AT2G01500.1 Homeodomain-like superfamily protein)

HSP 1 Score: 107.5 bits (267), Expect = 8.6e-24
Identity = 51/85 (60.00%), Postives = 60/85 (70.59%), Query Frame = 1 

Query: 72  SSSSSSTSSTTPTIPIVVSSSRWNPTVEQLRILEELYRRGTRTPSADQIQHITAQLRRFG 131
           SS           IP   ++ RWNPT EQ+  LEELYR GTRTP+ +QIQ I ++LR++G
Sbjct: 41  SSGEHDIDERKNNIP-AAATLRWNPTPEQITTLEELYRSGTRTPTTEQIQQIASKLRKYG 100

Query: 132 KIEGKNVFYWFQNHKARERQKRRRQ 157
           +IEGKNVFYWFQNHKARER KRRR+
Sbjct: 101 RIEGKNVFYWFQNHKARERLKRRRR 124

[Close]
BLAST of MELO3C017355 vs. NCBI nr
Match: gi|659107468|ref|XP_008453687.1| (PREDICTED: WUSCHEL-related homeobox 1 [Cucumis melo])

HSP 1 Score: 339.3 bits (869), Expect = 3.8e-90
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 1 

Query: 1   MWTLGYDDNGGEFCFSEAAFFHAARKLRPLLPRPLLSLRANGPPNFSSQYHHIGNVLDEE 60
           MWTLGYDDNGGEFCFSEAAFFHAARKLRPLLPRPLLSLRANGPPNFSSQYHHIGNVLDEE
Sbjct: 1   MWTLGYDDNGGEFCFSEAAFFHAARKLRPLLPRPLLSLRANGPPNFSSQYHHIGNVLDEE 60

Query: 61  RKREYLLNNEKSSSSSSTSSTTPTIPIVVSSSRWNPTVEQLRILEELYRRGTRTPSADQI 120
           RKREYLLNNEKSSSSSSTSSTTPTIPIVVSSSRWNPTVEQLRILEELYRRGTRTPSADQI
Sbjct: 61  RKREYLLNNEKSSSSSSTSSTTPTIPIVVSSSRWNPTVEQLRILEELYRRGTRTPSADQI 120

Query: 121 QHITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQTAADQTKYS 166
           QHITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQTAADQTKYS
Sbjct: 121 QHITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQTAADQTKYS 165

[Close]
BLAST of MELO3C017355 vs. NCBI nr
Match: gi|778656483|ref|XP_011649155.1| (PREDICTED: WUSCHEL-related homeobox 1 [Cucumis sativus])

HSP 1 Score: 301.6 bits (771), Expect = 8.8e-79
Identity = 153/167 (91.62%), Postives = 158/167 (94.61%), Query Frame = 1 

Query: 1   MWTLGYDDNGGEFCFSEAAFFHAARKLRPLLPRPLLSLRANGP-PNFSSQYHHIGNVLDE 60
           MWTLGYDDNGGEFCFSEA  FH ARKLRPL+PRPLLSLRANG  PNFSSQY+HIGNVLDE
Sbjct: 1   MWTLGYDDNGGEFCFSEATAFHGARKLRPLVPRPLLSLRANGRRPNFSSQYYHIGNVLDE 60

Query: 61  ERKRE-YLLNNEKSSSSSSTSSTTPTIPIVVSSSRWNPTVEQLRILEELYRRGTRTPSAD 120
           ERKR+ YLLNNEKSSSSSST+S+TP   IVVSSSRWNPTVEQLRILEELYRRGTRTPSAD
Sbjct: 61  ERKRDQYLLNNEKSSSSSSTTSSTP---IVVSSSRWNPTVEQLRILEELYRRGTRTPSAD 120

Query: 121 QIQHITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQTAADQTKYS 166
           QIQHITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQTAADQTKYS
Sbjct: 121 QIQHITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQTAADQTKYS 164

[Close]
BLAST of MELO3C017355 vs. NCBI nr
Match: gi|778664773|ref|XP_011660351.1| (PREDICTED: WUSCHEL-related homeobox 1 [Cucumis sativus])

HSP 1 Score: 179.1 bits (453), Expect = 6.6e-42
Identity = 99/157 (63.06%), Postives = 115/157 (73.25%), Query Frame = 1 

Query: 1   MWTLGYDDNGGEFCFSEAAFFHAARKLRPLLPRPLLSLRANGPPN-FSSQYHHIGNVLDE 60
           MW +GY+D       S+ +F   +RKLRPL+PRPL S  ++   N F SQ+HH+   + +
Sbjct: 1   MWMMGYNDAQDLNFPSDNSF--NSRKLRPLIPRPLSSSSSSSHTNDFFSQFHHMATSVAD 60

Query: 61  ERKREYLLNNEKSSSSSSTSSTTPTIPIVVSSSRWNPTVEQLRILEELYRRGTRTPSADQ 120
           + KRE  LNN  S SSS         P VV SSRWNPT EQLR+LEELYRRGTRTPSADQ
Sbjct: 61  QSKRE--LNNVLSPSSS---------PPVVVSSRWNPTPEQLRVLEELYRRGTRTPSADQ 120

Query: 121 IQHITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQ 157
           IQHIT+QLRR+GKIEGKNVFYWFQNHKARERQKRRRQ
Sbjct: 121 IQHITSQLRRYGKIEGKNVFYWFQNHKARERQKRRRQ 144

[Close]
BLAST of MELO3C017355 vs. NCBI nr
Match: gi|700209075|gb|KGN64171.1| (hypothetical protein Csa_1G042780 [Cucumis sativus])

HSP 1 Score: 179.1 bits (453), Expect = 6.6e-42
Identity = 99/157 (63.06%), Postives = 115/157 (73.25%), Query Frame = 1 

Query: 1   MWTLGYDDNGGEFCFSEAAFFHAARKLRPLLPRPLLSLRANGPPN-FSSQYHHIGNVLDE 60
           MW +GY+D       S+ +F   +RKLRPL+PRPL S  ++   N F SQ+HH+   + +
Sbjct: 1   MWMMGYNDAQDLNFPSDNSF--NSRKLRPLIPRPLSSSSSSSHTNDFFSQFHHMATSVAD 60

Query: 61  ERKREYLLNNEKSSSSSSTSSTTPTIPIVVSSSRWNPTVEQLRILEELYRRGTRTPSADQ 120
           + KRE  LNN  S SSS         P VV SSRWNPT EQLR+LEELYRRGTRTPSADQ
Sbjct: 61  QSKRE--LNNVLSPSSS---------PPVVVSSRWNPTPEQLRVLEELYRRGTRTPSADQ 120

Query: 121 IQHITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQ 157
           IQHIT+QLRR+GKIEGKNVFYWFQNHKARERQKRRRQ
Sbjct: 121 IQHITSQLRRYGKIEGKNVFYWFQNHKARERQKRRRQ 144

[Close]
BLAST of MELO3C017355 vs. NCBI nr
Match: gi|659066838|ref|XP_008463696.1| (PREDICTED: WUSCHEL-related homeobox 1-like [Cucumis melo])

HSP 1 Score: 179.1 bits (453), Expect = 6.6e-42
Identity = 99/157 (63.06%), Postives = 115/157 (73.25%), Query Frame = 1 

Query: 1   MWTLGYDDNGGEFCFSEAAFFHAARKLRPLLPRPLLSLRANGPPN-FSSQYHHIGNVLDE 60
           MW +GY+D       S+ +F   +RKLRPL+PRPL S  ++   N F SQ+HH+   + +
Sbjct: 1   MWMMGYNDAQDLNFPSDNSF--NSRKLRPLIPRPLSSSSSSSHTNDFFSQFHHMATSVAD 60

Query: 61  ERKREYLLNNEKSSSSSSTSSTTPTIPIVVSSSRWNPTVEQLRILEELYRRGTRTPSADQ 120
           + KRE  LNN  S SSS         P VV SSRWNPT EQLR+LEELYRRGTRTPSADQ
Sbjct: 61  QSKRE--LNNVLSPSSS---------PPVVVSSRWNPTPEQLRVLEELYRRGTRTPSADQ 120

Query: 121 IQHITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQ 157
           IQHIT+QLRR+GKIEGKNVFYWFQNHKARERQKRRRQ
Sbjct: 121 IQHITSQLRRYGKIEGKNVFYWFQNHKARERQKRRRQ 144

The following BLAST results are available for this feature:
BLAST of MELO3C017355 vs. Swiss-Prot
Match NameE-valueIdentityDescription
WOX1_ARATH7.6e-3853.13WUSCHEL-related homeobox 1 OS=Arabidopsis thaliana GN=WOX1 PE=2 SV=2[more]
WUS_ARATH2.4e-2351.61Protein WUSCHEL OS=Arabidopsis thaliana GN=WUS PE=1 SV=2[more]
WOX2_ARATH6.9e-2368.57WUSCHEL-related homeobox 2 OS=Arabidopsis thaliana GN=WOX2 PE=2 SV=1[more]
WOX4_ARATH1.2e-2244.44WUSCHEL-related homeobox 4 OS=Arabidopsis thaliana GN=WOX4 PE=2 SV=1[more]
WOX6_ARATH1.5e-2260.00WUSCHEL-related homeobox 6 OS=Arabidopsis thaliana GN=WOX6 PE=2 SV=2[more]
BLAST of MELO3C017355 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LSV4_CUCSA6.2e-7991.62Uncharacterized protein OS=Cucumis sativus GN=Csa_1G025040 PE=4 SV=1[more]
A0A0A0LVV6_CUCSA4.6e-4263.06Uncharacterized protein OS=Cucumis sativus GN=Csa_1G042780 PE=4 SV=1[more]
V4WEA8_9ROSI4.3e-4056.18Uncharacterized protein OS=Citrus clementina GN=CICLE_v10008783mg PE=4 SV=1[more]
A0A067F901_CITSI4.3e-4056.18Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g043602mg PE=4 SV=1[more]
A0A0L9VHS7_PHAAN2.8e-3956.25Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan10g033900 PE=4 SV=1[more]
BLAST of MELO3C017355 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G18010.14.3e-3953.13 WUSCHEL related homeobox 1[more]
AT2G17950.11.3e-2451.61 Homeodomain-like superfamily protein[more]
AT5G59340.13.9e-2468.57 WUSCHEL related homeobox 2[more]
AT1G46480.16.6e-2444.44 WUSCHEL related homeobox 4[more]
AT2G01500.18.6e-2460.00 Homeodomain-like superfamily protein[more]
BLAST of MELO3C017355 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659107468|ref|XP_008453687.1|3.8e-90100.00PREDICTED: WUSCHEL-related homeobox 1 [Cucumis melo][more]
gi|778656483|ref|XP_011649155.1|8.8e-7991.62PREDICTED: WUSCHEL-related homeobox 1 [Cucumis sativus][more]
gi|778664773|ref|XP_011660351.1|6.6e-4263.06PREDICTED: WUSCHEL-related homeobox 1 [Cucumis sativus][more]
gi|700209075|gb|KGN64171.1|6.6e-4263.06hypothetical protein Csa_1G042780 [Cucumis sativus][more]
gi|659066838|ref|XP_008463696.1|6.6e-4263.06PREDICTED: WUSCHEL-related homeobox 1-like [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001356Homeobox_dom
IPR009057Homeobox-like_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005634 nucleus
cellular_component GO:0005575 cellular_component
cellular_component GO:0044424 intracellular part
cellular_component GO:0005829 cytosol
molecular_function GO:0003677 DNA binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU61302melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C017355T1MELO3C017355T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU61302MU61302transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001356Homeobox domainPFAMPF00046Homeoboxcoord: 92..151
score: 1.2
IPR001356Homeobox domainSMARTSM00389HOX_1coord: 89..156
score: 7.
IPR001356Homeobox domainPROFILEPS50071HOMEOBOX_2coord: 97..152
score: 10
IPR009057Homeodomain-likeGENE3DG3DSA:1.10.10.60coord: 92..151
score: 7.
IPR009057Homeodomain-likeunknownSSF46689Homeodomain-likecoord: 91..156
score: 2.22
NoneNo IPR availablePANTHERPTHR24326FAMILY NOT NAMEDcoord: 87..161
score: 1.8
NoneNo IPR availablePANTHERPTHR24326:SF186SUBFAMILY NOT NAMEDcoord: 87..161
score: 1.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C017355Csa1G025040Cucumber (Chinese Long) v2cumeB055
MELO3C017355Csa1G042780Cucumber (Chinese Long) v2cumeB056
MELO3C017355Cla018927Watermelon (97103) v1mewmB289
MELO3C017355Cla018458Watermelon (97103) v1mewmB281
MELO3C017355ClCG06G014350Watermelon (Charleston Gray)mewcgB254
MELO3C017355ClCG04G010670Watermelon (Charleston Gray)mewcgB248
MELO3C017355Cla97C04G077500Watermelon (97103) v2mewmbB253
MELO3C017355Cla97C06G123810Watermelon (97103) v2mewmbB261
MELO3C017355Bhi02G000098Wax gourdmewgoB306
MELO3C017355Bhi08G001073Wax gourdmewgoB283
MELO3C017355CSPI01G04310Wild cucumber (PI 183967)cpimeB056
MELO3C017355CSPI01G07180Wild cucumber (PI 183967)cpimeB058
MELO3C017355Cucsa.111520Cucumber (Gy14) v1cgymeB160
MELO3C017355Cucsa.121900Cucumber (Gy14) v1cgymeB186
MELO3C017355CmaCh11G003110Cucurbita maxima (Rimu)cmameB120
MELO3C017355CmaCh18G000710Cucurbita maxima (Rimu)cmameB372
MELO3C017355CmaCh13G009930Cucurbita maxima (Rimu)cmameB207
MELO3C017355CmoCh11G003160Cucurbita moschata (Rifu)cmomeB109
MELO3C017355CmoCh13G010290Cucurbita moschata (Rifu)cmomeB191
MELO3C017355Lsi02G002300Bottle gourd (USVL1VR-Ls)lsimeB209
MELO3C017355Lsi06G012870Bottle gourd (USVL1VR-Ls)lsimeB397
MELO3C017355Cp4.1LG04g13710Cucurbita pepo (Zucchini)cpemeB615
MELO3C017355Cp4.1LG20g01480Cucurbita pepo (Zucchini)cpemeB483
MELO3C017355Cp4.1LG09g11150Cucurbita pepo (Zucchini)cpemeB033
MELO3C017355CsGy1G004210Cucumber (Gy14) v2cgybmeB050
MELO3C017355Carg04845Silver-seed gourdcarmeB0396
MELO3C017355Carg09102Silver-seed gourdcarmeB0599
MELO3C017355CsaV3_1G007120Cucumber (Chinese Long) v3cucmeB056
MELO3C017355CsaV3_1G004310Cucumber (Chinese Long) v3cucmeB055
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
MELO3C017355MELO3C002129Melon (DHL92) v3.5.1memeB066
The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C017355Cucurbita pepo (Zucchini)cpemeB330
MELO3C017355Cucumber (Gy14) v2cgybmeB052
MELO3C017355Silver-seed gourdcarmeB0785
MELO3C017355Cucurbita maxima (Rimu)cmameB067
MELO3C017355Cucurbita moschata (Rifu)cmomeB059