MELO3C016855.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C016855.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionCRG16
Locationchr07 : 1580182 .. 1580793 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCCTCTTTTCTCTATTATATAAACACTCCCACCCTTCTCTTTCTCCGTTGCCAAACCTTCCATTCCTTTTCCTCTCTCAATATTCTTTCTTTTCTTACAAAACCCTAATCTTTTTCTCTTTTTTGGAAGCAATGGCCGCCGTCTCTAATGTTTCTTTCATGGCTCTTGTTGCCCTCTTGTTCGCCATCTTCTCCATTGCGCTCGCACAATCTGCAGAGTCTCCTGCTCCTGCTCCGGCTTCTCCGGCTAACTCTGTTGTTCCGTCCTTGAGTCTTGCTTGTGTTGGTGCTTTCGTTGCTCTCCTCTTTGGATCTGCACTCAAGGCTTGAATGATACTTTGTACGCGTTTTGTGATTTTAGCAATGGATTCGTTTACTGATGATGCTCGATTACATTATGGAGGGTTTTTATTGACTATATTATTGAGTGTATAGGACATGGTTTTCGACGATGTCAAGAATTAGGTTTTATTAGAGATTGGTGGTTTGTATTCATGTATTATTATTATTCATTGTGTGTTATCTCATTATTAATATTGTTCCTTTTATATATCCACATTATTTGAGTAAATAAATTATTTCAGTTTTCTACTCTCTGTCTCGTCAAATTGAT

mRNA sequence

TCCTCTTTTCTCTATTATATAAACACTCCCACCCTTCTCTTTCTCCGTTGCCAAACCTTCCATTCCTTTTCCTCTCTCAATATTCTTTCTTTTCTTACAAAACCCTAATCTTTTTCTCTTTTTTGGAAGCAATGGCCGCCGTCTCTAATGTTTCTTTCATGGCTCTTGTTGCCCTCTTGTTCGCCATCTTCTCCATTGCGCTCGCACAATCTGCAGAGTCTCCTGCTCCTGCTCCGGCTTCTCCGGCTAACTCTGTTGTTCCGTCCTTGAGTCTTGCTTGTGTTGGTGCTTTCGTTGCTCTCCTCTTTGGATCTGCACTCAAGGCTTGAATGATACTTTGTACGCGTTTTGTGATTTTAGCAATGGATTCGTTTACTGATGATGCTCGATTACATTATGGAGGGTTTTTATTGACTATATTATTGAGTGTATAGGACATGGTTTTCGACGATGTCAAGAATTAGGTTTTATTAGAGATTGGTGGTTTGTATTCATGTATTATTATTATTCATTGTGTGTTATCTCATTATTAATATTGTTCCTTTTATATATCCACATTATTTGAGTAAATAAATTATTTCAGTTTTCTACTCTCTGTCTCGTCAAATTGAT

Coding sequence (CDS)

CTCTTTTCTCTATTATATAAACACTCCCACCCTTCTCTTTCTCCGTTGCCAAACCTTCCATTCCTTTTCCTCTCTCAATATTCTTTCTTTTCTTACAAAACCCTAATCTTTTTCTCTTTTTTGGAAGCAATGGCCGCCGTCTCTAATGTTTCTTTCATGGCTCTTGTTGCCCTCTTGTTCGCCATCTTCTCCATTGCGCTCGCACAATCTGCAGAGTCTCCTGCTCCTGCTCCGGCTTCTCCGGCTAACTCTGTTGTTCCGTCCTTGAGTCTTGCTTGTGTTGGTGCTTTCGTTGCTCTCCTCTTTGGATCTGCACTCAAGGCTTGA

Protein sequence

LFSLLYKHSHPSLSPLPNLPFLFLSQYSFFSYKTLIFFSFLEAMAAVSNVSFMALVALLFAIFSIALAQSAESPAPAPASPANSVVPSLSLACVGAFVALLFGSALKA
Homology
The following BLAST results are available for this feature:
BLAST of MELO3C016855.2 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C016855.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C016855.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C016855.2 vs. TrEMBL
Match NameE-valueIdentityDescription
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C016855.2.1MELO3C016855.2.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C016855.2CmaCh01G017490Cucurbita maxima (Rimu)cmamedB499
MELO3C016855.2Carg21745Silver-seed gourdcarmedB0334
MELO3C016855.2CsaV3_4G035470Cucumber (Chinese Long) v3cucmedB308
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C016855.2Wax gourdmedwgoB594
MELO3C016855.2Wax gourdmedwgoB601
MELO3C016855.2Wax gourdmedwgoB605
MELO3C016855.2Wax gourdmedwgoB616
MELO3C016855.2Cucumber (Gy14) v2cgybmedB069
MELO3C016855.2Cucumber (Gy14) v2cgybmedB127
MELO3C016855.2Cucumber (Gy14) v2cgybmedB267
MELO3C016855.2Cucumber (Gy14) v2cgybmedB496
MELO3C016855.2Cucumber (Gy14) v1cgymedB571
MELO3C016855.2Cucumber (Gy14) v1cgymedB585
MELO3C016855.2Cucumber (Gy14) v1cgymedB642
MELO3C016855.2Cucurbita maxima (Rimu)cmamedB039
MELO3C016855.2Cucurbita maxima (Rimu)cmamedB084
MELO3C016855.2Cucurbita maxima (Rimu)cmamedB154
MELO3C016855.2Cucurbita maxima (Rimu)cmamedB198
MELO3C016855.2Cucurbita maxima (Rimu)cmamedB836
MELO3C016855.2Cucurbita moschata (Rifu)cmomedB029
MELO3C016855.2Cucurbita moschata (Rifu)cmomedB078
MELO3C016855.2Cucurbita moschata (Rifu)cmomedB144
MELO3C016855.2Cucurbita moschata (Rifu)cmomedB188
MELO3C016855.2Cucurbita moschata (Rifu)cmomedB499
MELO3C016855.2Cucurbita moschata (Rifu)cmomedB826
MELO3C016855.2Cucurbita pepo (Zucchini)cpemedB132
MELO3C016855.2Cucurbita pepo (Zucchini)cpemedB404
MELO3C016855.2Cucurbita pepo (Zucchini)cpemedB638
MELO3C016855.2Cucurbita pepo (Zucchini)cpemedB768
MELO3C016855.2Cucurbita pepo (Zucchini)cpemedB867
MELO3C016855.2Cucurbita pepo (Zucchini)cpemedB920
MELO3C016855.2Wild cucumber (PI 183967)cpimedB073
MELO3C016855.2Wild cucumber (PI 183967)cpimedB142
MELO3C016855.2Wild cucumber (PI 183967)cpimedB302
MELO3C016855.2Wild cucumber (PI 183967)cpimedB556
MELO3C016855.2Cucumber (Chinese Long) v2cumedB074
MELO3C016855.2Cucumber (Chinese Long) v2cumedB141
MELO3C016855.2Cucumber (Chinese Long) v2cumedB298
MELO3C016855.2Cucumber (Chinese Long) v2cumedB537
MELO3C016855.2Melon (DHL92) v3.6.1medmedB097
MELO3C016855.2Melon (DHL92) v3.6.1medmedB114
MELO3C016855.2Melon (DHL92) v3.6.1medmedB124
MELO3C016855.2Bottle gourd (USVL1VR-Ls)lsimedB330
MELO3C016855.2Bottle gourd (USVL1VR-Ls)lsimedB507
MELO3C016855.2Watermelon (Charleston Gray)medwcgB442
MELO3C016855.2Watermelon (Charleston Gray)medwcgB467
MELO3C016855.2Watermelon (Charleston Gray)medwcgB475
MELO3C016855.2Watermelon (Charleston Gray)medwcgB496
MELO3C016855.2Watermelon (97103) v1medwmB479
MELO3C016855.2Watermelon (97103) v1medwmB487
MELO3C016855.2Watermelon (97103) v1medwmB490
MELO3C016855.2Watermelon (97103) v1medwmB514
MELO3C016855.2Silver-seed gourdcarmedB0100
MELO3C016855.2Silver-seed gourdcarmedB0191
MELO3C016855.2Silver-seed gourdcarmedB0781
MELO3C016855.2Cucumber (Chinese Long) v3cucmedB082
MELO3C016855.2Cucumber (Chinese Long) v3cucmedB143
MELO3C016855.2Cucumber (Chinese Long) v3cucmedB570
MELO3C016855.2Watermelon (97103) v2medwmbB479
MELO3C016855.2Watermelon (97103) v2medwmbB499
MELO3C016855.2Watermelon (97103) v2medwmbB504